RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SCHIP1Q9P0W5 487 aaPredicted RBP20.75■□□□□ 0.91
NEDD8-201ENST00000250495 FAM153AQ9UHL3 310 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 HYOU1Q9Y4L1 999 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 PDZK1P1A8MUH7 402 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 CST8O60676 142 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 WISP1O95388 367 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 EPOP01588 193 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 ANKRD34CP0C6C1 535 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 AMD1P17707 334 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 IDSP22304 550 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 HMGCLP35914 325 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 SLC19A1P41440 591 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 CDKN2BP42772 138 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 TAZQ16635 292 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 PLA2G4EQ3MJ16 856 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 ABRAXAS1Q6UWZ7 409 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 BRSK1Q8TDC3 778 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 SLC45A3Q96JT2 553 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 SLC25A18Q9H1K4 315 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 CLMPQ9H6B4 373 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 GPN2Q9H9Y4 310 aaPredicted RBP20.74■□□□□ 0.91
NEDD8-201ENST00000250495 BPIFA1Q9NP55 256 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.74■□□□□ 0.91
NEDD8-201ENST00000250495 ZNF624Q9P2J8 865 aaPredicted RBP20.74■□□□□ 0.91
NEDD8-201ENST00000250495 SAE1Q9UBE0 346 aaPredicted RBP20.74■□□□□ 0.91
NEDD8-201ENST00000250495 DNAJC16Q9Y2G8 782 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 TMEM184BQ9Y519 407 aaPredicted RBP20.74■□□□□ 0.91
NEDD8-201ENST00000250495 SPO11Q9Y5K1 396 aa20.74■□□□□ 0.91
NEDD8-201ENST00000250495 MN1Q10571 1320 aaPredicted RBP20.74■□□□□ 0.91
NEDD8-201ENST00000250495 SPTA1P02549 2419 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 LOC285095A0A1B0GVY8 99 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 AKR1B15C9JRZ8 316 aaPredicted RBP20.73■□□□□ 0.91
NEDD8-201ENST00000250495 AURKAO14965 403 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 TOX3O15405 576 aaPredicted RBP20.73■□□□□ 0.91
NEDD8-201ENST00000250495 PSTPIP1O43586 416 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 KCNJ13O60928 360 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 MTX2O75431 263 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 UBXN7O94888 489 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 C9P02748 559 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 VCLP18206 1134 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 ABHD18Q0P651 414 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 TMEM115Q12893 351 aaPredicted RBP20.73■□□□□ 0.91
NEDD8-201ENST00000250495 GTF2H3Q13889 308 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 CLCA4Q14CN2 919 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 ZDHHC20Q5W0Z9 365 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 KAZNQ674X7 775 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 WASH2PQ6VEQ5 465 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 ATG14Q6ZNE5 492 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 RBM12BQ8IXT5 1001 aaKnown RBP20.73■□□□□ 0.91
NEDD8-201ENST00000250495 GDAP1Q8TB36 358 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 DTX3LQ8TDB6 740 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 P3H4Q92791 437 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 C9orf72Q96LT7 481 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 TTC25Q96NG3 672 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 VAT1Q99536 393 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 TSPY26PQ9H489 355 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 APMAPQ9HDC9 416 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 WASH6PQ9NQA3 447 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 POT1Q9NUX5 634 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 ALG6Q9Y672 507 aa20.73■□□□□ 0.91
NEDD8-201ENST00000250495 STK17BO94768 372 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 TYRP1P17643 537 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 CD68P34810 354 aaPredicted RBP20.72■□□□□ 0.91
NEDD8-201ENST00000250495 CCR10P46092 362 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 WNT3AP56704 352 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 WASHC5Q12768 1159 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 SEPT7Q16181 437 aaKnown RBP20.72■□□□□ 0.91
NEDD8-201ENST00000250495 ATP13A5Q4VNC0 1218 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 TFDP3Q5H9I0 405 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 AGAP9Q5VTM2 703 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 SPOCD1Q6ZMY3 1216 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 ZNF547Q8IVP9 402 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 OGFRQ9NZT2 677 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 HACD3Q9P035 362 aa20.72■□□□□ 0.91
NEDD8-201ENST00000250495 KLHL8Q9P2G9 620 aaPredicted RBP20.72■□□□□ 0.91
NEDD8-201ENST00000250495 GOLGA6L3A6NEY3 463 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 PRR19A6NJB7 356 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 SUV39H1O43463 412 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 ZRANB2O95218 330 aaKnown RBP eCLIP20.71■□□□□ 0.91
NEDD8-201ENST00000250495 NFKB1P19838 968 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 RPL10P27635 214 aaKnown RBP20.71■□□□□ 0.91
NEDD8-201ENST00000250495 MAGEA1P43355 309 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 HADHBP55084 474 aaKnown RBP20.71■□□□□ 0.91
NEDD8-201ENST00000250495 GFERP55789 205 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 KDELC1Q6UW63 502 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 PID1Q7Z2X4 250 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 TIPARPQ7Z3E1 657 aaKnown RBP20.71■□□□□ 0.91
NEDD8-201ENST00000250495 TRAPPC5Q8IUR0 188 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 RCOR2Q8IZ40 523 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 CXorf40BQ96DE9 158 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 FCRL5Q96RD9 977 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 IL26Q9NPH9 171 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 TMPRSS11EQ9UL52 423 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 SLC30A1Q9Y6M5 507 aa20.71■□□□□ 0.91
NEDD8-201ENST00000250495 LOC101059948A0A1B0GTJ6 334 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 PYCARD-AS1I3L0S3 204 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 BRAFP15056 766 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 PECAM1P16284 738 aaPredicted RBP20.7■□□□□ 0.9
NEDD8-201ENST00000250495 CSRP3P50461 194 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 MC1RQ01726 317 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms