RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 DIO3P55073 304 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 CDKN3Q16667 212 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 LILRA2Q8N149 483 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 PLCD3Q8N3E9 789 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 CPXM2Q8N436 756 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 FIBINQ8TAL6 211 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 ASB9Q96DX5 294 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 CDK15Q96Q40 435 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 CORO1BQ9BR76 489 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 C17orf80Q9BSJ5 609 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 VCX3BQ9H321 246 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 ABCB8Q9NUT2 735 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 ZDHHC7Q9NXF8 308 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 C6orf203Q9P0P8 240 aaPredicted RBP21.44■■□□□ 1.02
CLN6-201ENST00000249806 CROTQ9UKG9 612 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 MAFFQ9ULX9 164 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 PRRC2BQ5JSZ5 2229 aaKnown RBP21.44■■□□□ 1.02
CLN6-201ENST00000249806 GOLGA8CPA6NN73 597 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 TIMP1P01033 207 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 PPM1AP35813 382 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 NFATC2Q13469 925 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 PITRM1Q5JRX3 1037 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 OGFRL1Q5TC84 451 aaPredicted RBP21.44■■□□□ 1.02
CLN6-201ENST00000249806 PTRHD1Q6GMV3 140 aaKnown RBP21.44■■□□□ 1.02
CLN6-201ENST00000249806 CERS6Q6ZMG9 384 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 MIER2Q8N344 545 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 OR52B6Q8NGF0 335 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 LKAAEAR1Q8TD35 194 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 SLC22A17Q8WUG5 538 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 PPP2R3CQ969Q6 453 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 CLPBQ9H078 707 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 IL1RL2Q9HB29 575 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 MAP10Q9P2G4 905 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 CCL26Q9Y258 94 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 PIKFYVEQ9Y2I7 2098 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 KIAA0100Q14667 2235 aaKnown RBP21.43■■□□□ 1.02
CLN6-201ENST00000249806 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.43■■□□□ 1.02
CLN6-201ENST00000249806 CXCL14O95715 111 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 BPIP17213 487 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 C8orf82Q6P1X6 216 aaPredicted RBP21.43■■□□□ 1.02
CLN6-201ENST00000249806 ZFP1Q6P2D0 407 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 LILRA6Q6PI73 481 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 TSPAN33Q86UF1 283 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.43■■□□□ 1.02
CLN6-201ENST00000249806 GMPR2Q9P2T1 348 aaKnown RBP21.43■■□□□ 1.02
CLN6-201ENST00000249806 PCDHB1Q9Y5F3 818 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 TRAV19A0A0A6YYK7 116 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 CAPN8A6NHC0 703 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 DNAJA2O60884 412 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 OR4F21O95013 312 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 MLYCDO95822 493 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 ZNF7P17097 686 aaPredicted RBP21.43■■□□□ 1.02
CLN6-201ENST00000249806 CAPN3P20807 821 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 MPP7Q5T2T1 576 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 CAPRIN2Q6IMN6 1127 aaKnown RBP21.43■■□□□ 1.02
CLN6-201ENST00000249806 VOPP1Q96AW1 172 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 PAWRQ96IZ0 340 aaKnown RBP21.43■■□□□ 1.02
CLN6-201ENST00000249806 ATP13A3Q9H7F0 1226 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 HCFC1R1Q9NWW0 138 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 TMEM181Q9P2C4 612 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 SUCOQ9UBS9 1254 aaKnown RBP21.43■■□□□ 1.02
CLN6-201ENST00000249806 CD300AQ9UGN4 299 aa21.43■■□□□ 1.02
CLN6-201ENST00000249806 MAGEA13PA6NCF6 341 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 CCL16O15467 120 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 RNASEH1O60930 286 aaKnown RBP21.42■■□□□ 1.02
CLN6-201ENST00000249806 UROSP10746 265 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 CCR2P41597 374 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 RPS6KA2Q15349 733 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 GSTA3Q16772 222 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 SBSNQ6UWP8 590 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 SNX20Q7Z614 316 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 OR56A4Q8NGH8 313 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 GRIN3AQ8TCU5 1115 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 LRGUKQ96M69 825 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 SDR39U1Q9NRG7 319 aaPredicted RBP21.42■■□□□ 1.02
CLN6-201ENST00000249806 RIMS3Q9UJD0 308 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 ZNF510Q9Y2H8 683 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 PTPRSQ13332 1948 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 SCN8AQ9UQD0 1980 aa21.42■■□□□ 1.02
CLN6-201ENST00000249806 TRIM16O95361 564 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 IGSF6O95976 241 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 ZCCHC18P0CG32 403 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 HLA-FP30511 346 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 SLC7A2P52569 658 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 RPL26P61254 145 aaKnown RBP21.41■■□□□ 1.02
CLN6-201ENST00000249806 GPRIN3Q6ZVF9 776 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 CDYL2Q8N8U2 506 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 KLHL23Q8NBE8 558 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 KREMEN2Q8NCW0 462 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 OR2AP1Q8NGE2 309 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 OR2T11Q8NH01 316 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 ATP6V1E2Q96A05 226 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 SPDL1Q96EA4 605 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 PDLIM5Q96HC4 596 aaKnown RBP21.41■■□□□ 1.02
CLN6-201ENST00000249806 NR1H4Q96RI1 486 aaPredicted RBP21.41■■□□□ 1.02
CLN6-201ENST00000249806 PKP2Q99959 881 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 SCOCQ9UIL1 159 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 MYO7AQ13402 2215 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 PEX1O43933 1283 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 SLC25A14O95258 325 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms