RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 MSANTD3Q96H12 275 aa18.52■□□□□ 0.56
TNFSF9-201ENST00000245817 COQ10AQ96MF6 247 aa18.52■□□□□ 0.56
TNFSF9-201ENST00000245817 SPATS2LQ9NUQ6 558 aaKnown RBP18.52■□□□□ 0.56
TNFSF9-201ENST00000245817 FADS3Q9Y5Q0 445 aa18.52■□□□□ 0.56
TNFSF9-201ENST00000245817 UNC80Q8N2C7 3258 aa18.52■□□□□ 0.56
TNFSF9-201ENST00000245817 TICRRQ7Z2Z1 1910 aa18.52■□□□□ 0.55
TNFSF9-201ENST00000245817 SYCE1LA8MT33 242 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 MAGEC1O60732 1142 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 RECQL5O94762 991 aaPredicted RBP18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 C6P13671 934 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 ATP1B2P14415 290 aaPredicted RBP18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 ITGB6P18564 788 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 CLCN7P51798 805 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 MRPS21P82921 87 aaKnown RBP18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 TTLL9Q3SXZ7 439 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 LDLRAP1Q5SW96 308 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 CACUL1Q86Y37 369 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 HDDC3Q8N4P3 179 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 IL17RCQ8NAC3 791 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 GANCQ8TET4 914 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 EEF1AKMT1Q8WVE0 214 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 KIAA1191Q96A73 305 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 LINGO1Q96FE5 620 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 SLC30A3Q99726 388 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 GABRG3Q99928 467 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 RNF112Q9ULX5 631 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 COQ6Q9Y2Z9 468 aa18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 MTF2Q9Y483 593 aaPredicted RBP18.51■□□□□ 0.55
TNFSF9-201ENST00000245817 IGLV3-16A0A075B6K0 115 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 CCDC189A1A4V9 331 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 SPINT1O43278 529 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 TSPAN6O43657 245 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 IPO13O94829 963 aaKnown RBP18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 DNTTP04053 509 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 HOXB2P14652 356 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 DGKAP23743 735 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 NAGLUP54802 743 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 DNAJB13P59910 316 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 DMTNQ08495 405 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 FBXO43Q4G163 708 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 PIP5KL1Q5T9C9 394 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 ZNF765Q7L2R6 523 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 RAB44Q7Z6P3 723 aaPredicted RBP18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 WDR75Q8IWA0 830 aaKnown RBP18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 CPNE9Q8IYJ1 553 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 CCNYL1Q8N7R7 359 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 TXNDC5Q8NBS9 432 aaKnown RBP18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 BTN2A2Q8WVV5 523 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 PTERQ96BW5 349 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 VPS35Q96QK1 796 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 GATA5Q9BWX5 397 aaPredicted RBP18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 KCTD5Q9NXV2 234 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 NCKIPSDQ9NZQ3 722 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 QSOX1O00391 747 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 BTN3A1O00481 513 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 ITM2AO43736 263 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 RNASEH2AO75792 299 aaKnown RBP18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 PCDH8O95206 1070 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 KITP10721 976 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 RPS14P62263 151 aaKnown RBP18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 IFT88Q13099 833 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 CRY1Q16526 586 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 CES4AQ5XG92 561 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 DET1Q7L5Y6 550 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 SPNS2Q8IVW8 549 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 ZBTB2Q8N680 514 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 DDHD1Q8NEL9 900 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 GIMAP7Q8NHV1 300 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 FAM3CQ92520 227 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 EXT2Q93063 718 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 GLYATL1Q969I3 302 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 CCDC97Q96F63 343 aaPredicted RBP18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 ZNF395Q9H8N7 513 aaPredicted RBP18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 DCTN4Q9UJW0 460 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 USH1CQ9Y6N9 552 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 SCN8AQ9UQD0 1980 aa18.5■□□□□ 0.55
TNFSF9-201ENST00000245817 TCF20Q9UGU0 1960 aaKnown RBP18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 A0A0G2JND7 137 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 A0A1W2PP55 124 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 AP1G1O43747 822 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 KERAO60938 352 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 LYPLA1O75608 230 aaPredicted RBP18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 KIAA0754O94854 1291 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 AP2A2O94973 939 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 DRD3P35462 400 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 GPR1P46091 355 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 ARFIP2P53365 341 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 TDGQ13569 410 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 RAET1GQ6H3X3 334 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 NAPRTQ6XQN6 538 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 PIWIL4Q7Z3Z4 852 aaKnown RBP18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 PHYKPLQ8IUZ5 450 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 MYO1HQ8N1T3 1032 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 AADATQ8N5Z0 425 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 OR6Y1Q8NGX8 325 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 PIWIL2Q8TC59 973 aaKnown RBP18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 NAT14Q8WUY8 206 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 PHF21BQ96EK2 531 aa18.49■□□□□ 0.55
TNFSF9-201ENST00000245817 PDLIM5Q96HC4 596 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms