RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 TIGD6Q17RP2 521 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 TMEM5Q9Y2B1 443 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 TESMINQ9Y4I5 508 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 TIMM22Q9Y584 194 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 C9JVG2 144 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 LAMP2P13473 410 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 GNALP38405 381 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 YAP1P46937 504 aaKnown RBP13.75□□□□□ -0.21
TARDBP-201ENST00000240185 TAS2R40P59535 323 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 AP1S1P61966 158 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 RPL7AP62424 266 aaKnown RBP13.75□□□□□ -0.21
TARDBP-201ENST00000240185 GCNT6Q5T4J0 391 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 NCCRP1Q6ZVX7 275 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-201ENST00000240185 RAB11FIP2Q7L804 512 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 ANKRD23Q86SG2 305 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 ZNF34Q8IZ26 560 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 TMEM161BQ8NDZ6 487 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 ZNF563Q8TA94 476 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 GRIN3AQ8TCU5 1115 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 NKD1Q969G9 470 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 hCG_2039718K7EN88 272 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 NOBOXO60393 691 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 INSRRP14616 1297 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 PPP3R1P63098 170 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 RAP1GAP2Q684P5 730 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 ZNF431Q8TF32 576 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-201ENST00000240185 EMID1Q96A84 441 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-201ENST00000240185 EQTNQ9NQ60 294 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 TMEM150BA6NC51 233 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 QSOX1O00391 747 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 CCNB2O95067 398 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 MARSP56192 900 aaKnown RBP13.75□□□□□ -0.21
TARDBP-201ENST00000240185 ZBED5Q49AG3 693 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 IL23RQ5VWK5 629 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 LYPLAL1Q5VWZ2 237 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 HAGHLQ6PII5 290 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-201ENST00000240185 OTOP1Q7RTM1 612 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 C11orf65Q8NCR3 313 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 CCDC54Q8NEL0 328 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 PCDH19Q8TAB3 1148 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 TNFRSF25Q93038 417 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 MARK1Q9P0L2 795 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 CCL15-CCL14A0A0B4J2E2 113 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 L7N2F9 121 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 MAXP61244 160 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 CCL15Q16663 113 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 MPPE1Q53F39 396 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 GARNL3Q5VVW2 1013 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 CCDC107Q8WV48 283 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 CLP1Q92989 425 aaKnown RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 C1QTNF7Q9BXJ2 289 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 TM6SF2Q9BZW4 377 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 TMEM27Q9HBJ8 222 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 TCF7L1Q9HCS4 588 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 ABCA9Q8IUA7 1624 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 EFCAB6Q5THR3 1501 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 H3BRB1 525 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 COL6A2P12110 1019 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 CHRNA5P30532 468 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 ARCN1P48444 511 aaKnown RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 ATXN1P54253 815 aaKnown RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 MERTKQ12866 999 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 SLC39A12Q504Y0 691 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 STOML3Q8TAV4 291 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 AP2M1Q96CW1 435 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 PIWIL1Q96J94 861 aaKnown RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 TUT1Q9H6E5 874 aaKnown RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 SOHLH2Q9NX45 425 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 RAB27AP51159 221 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 RGS8P57771 180 aaPredicted RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 SYT16Q17RD7 645 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 VMACQ2NL98 169 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 PLEKHG6Q3KR16 790 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 FAM171A1Q5VUB5 890 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 ILDR1Q86SU0 546 aaPredicted RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 FAM83AQ86UY5 434 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 PHF13Q86YI8 300 aaPredicted RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 SYNPOQ8N3V7 929 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 ROPN1LQ96C74 230 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 ZNF700Q9H0M5 742 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 ATG10Q9H0Y0 220 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 ERVK-5Q9HDB9 667 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 EDARQ9UNE0 448 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 SRCP12931 536 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 RHEBQ15382 184 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 FNDC3BQ53EP0 1204 aaKnown RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 ZDHHC21Q8IVQ6 265 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 SLC37A3Q8NCC5 494 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 OR10H4Q8NGA5 316 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 OR5J2Q8NH18 312 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 C5orf34Q96MH7 638 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 ZSWIM3Q96MP5 696 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 GTPBP2Q9BX10 602 aaKnown RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 DEFB129Q9H1M3 183 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 TRPV4Q9HBA0 871 aa13.74□□□□□ -0.21
TARDBP-201ENST00000240185 RPH3AQ9Y2J0 694 aaPredicted RBP13.74□□□□□ -0.21
TARDBP-201ENST00000240185 NPEPPSL1A6NEC2 478 aa13.73□□□□□ -0.21
TARDBP-201ENST00000240185 H3BSA7 217 aa13.73□□□□□ -0.21
TARDBP-201ENST00000240185 LINGO3P0C6S8 592 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms