RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 CNTFP26441 200 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 ATP5DP30049 168 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 GALNSP34059 522 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 ACVR1Q04771 509 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 BCL2L1Q07817 233 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 NIPAL4Q0D2K0 466 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 SLC14A1Q13336 389 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 SLC1A5Q15758 541 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 HNRNPA1L2Q32P51 320 aaKnown RBP9.28□□□□□ -0.92
TGFB3-201ENST00000238682 ARMC12Q5T9G4 340 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 FAM46CQ5VWP2 391 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 MRM1Q6IN84 353 aaKnown RBP9.28□□□□□ -0.92
TGFB3-201ENST00000238682 IRGCQ6NXR0 463 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 ZNF534Q76KX8 674 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 KBTBD6Q86V97 674 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 CAND1Q86VP6 1230 aaKnown RBP9.28□□□□□ -0.92
TGFB3-201ENST00000238682 SYT12Q8IV01 421 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 ALDH16A1Q8IZ83 802 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 SPERTQ8NA61 448 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 CADM4Q8NFZ8 388 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 OR8D1Q8WZ84 308 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 PTPRN2Q92932 1015 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 OXNAD1Q96HP4 312 aaPredicted RBP9.28□□□□□ -0.92
TGFB3-201ENST00000238682 CRB3Q9BUF7 120 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 SLC24A2Q9UI40 661 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 LRRC42Q9Y546 428 aa9.28□□□□□ -0.92
TGFB3-201ENST00000238682 PSMD11O00231 422 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 SLC7A4O43246 635 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 SYPP08247 313 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 ZNF30P17039 623 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 KRT20P35900 424 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 NUDT1P36639 197 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 CD86P42081 329 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 ELAVL3Q14576 367 aaKnown RBP9.27□□□□□ -0.93
TGFB3-201ENST00000238682 DUOXA1Q1HG43 343 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 TBCELQ5QJ74 424 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 HP1BP3Q5SSJ5 553 aaPredicted RBP9.27□□□□□ -0.93
TGFB3-201ENST00000238682 AGBL2Q5U5Z8 902 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 SLC23A3Q6PIS1 610 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 TMEM135Q86UB9 458 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 IL17RCQ8NAC3 791 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 BRSK1Q8TDC3 778 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 ZNF473Q8WTR7 871 aaKnown RBP9.27□□□□□ -0.93
TGFB3-201ENST00000238682 SIGLEC10Q96LC7 697 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 CITED4Q96RK1 184 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 NUSAP1Q9BXS6 441 aaKnown RBP9.27□□□□□ -0.93
TGFB3-201ENST00000238682 SLC32A1Q9H598 525 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 A0A1B0GVG6 124 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 OTOL1A6NHN0 477 aaPredicted RBP9.27□□□□□ -0.93
TGFB3-201ENST00000238682 C1QTNF3-AMACRE9PGA6 284 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 RGS16O15492 202 aaPredicted RBP9.27□□□□□ -0.93
TGFB3-201ENST00000238682 SNAP91O60641 907 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 SIN3BO75182 1162 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 FAM155BO75949 473 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 PGLSO95336 258 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 ZNF883P0CG24 379 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 CYP2A6P11509 494 aaPredicted RBP9.27□□□□□ -0.93
TGFB3-201ENST00000238682 ACADSP16219 412 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 COPAP53621 1224 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 DMWDQ09019 674 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 TAF1AQ15573 450 aaPredicted RBP9.27□□□□□ -0.93
TGFB3-201ENST00000238682 DLG2Q15700 870 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 PTPRNQ16849 979 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 GEN1Q17RS7 908 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 PLA2G4EQ3MJ16 856 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 STPG1Q5TH74 334 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 LYSMD4Q5XG99 296 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 IL27RAQ6UWB1 636 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 CBARPQ8N350 705 aaPredicted RBP9.27□□□□□ -0.93
TGFB3-201ENST00000238682 MPP5Q8N3R9 675 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 ARFGAP2Q8N6H7 521 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 GSDMBQ8TAX9 411 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 CALML6Q8TD86 181 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 STYXQ8WUJ0 223 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 CDKL2Q92772 493 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 MYO19Q96H55 970 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 C9orf72Q96LT7 481 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 HHIPQ96QV1 700 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 TMEM9BQ9NQ34 198 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 IL36AQ9UHA7 158 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 PCDHGB2Q9Y5G2 931 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 MUC6Q6W4X9 2439 aa9.27□□□□□ -0.93
TGFB3-201ENST00000238682 GOLGA8MH3BSY2 632 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 H7C0S8 307 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 TRAFD1O14545 582 aaPredicted RBP9.26□□□□□ -0.93
TGFB3-201ENST00000238682 RASGRF2O14827 1237 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 TM4SF5O14894 197 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 ADH1BP00325 375 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 ATXN1LP0C7T5 689 aaKnown RBP9.26□□□□□ -0.93
TGFB3-201ENST00000238682 KRT4P19013 534 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 PRKCHP24723 683 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 HADHAP40939 763 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 TMPRSS15P98073 1019 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 DSC2Q02487 901 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 PDIA2Q13087 525 aaKnown RBP9.26□□□□□ -0.93
TGFB3-201ENST00000238682 DNAJC3Q13217 504 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 CAMK2GQ13555 558 aaPredicted RBP9.26□□□□□ -0.93
TGFB3-201ENST00000238682 ANKRD22Q5VYY1 191 aa9.26□□□□□ -0.93
TGFB3-201ENST00000238682 KIAA0930Q6ICG6 404 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms