RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 HK3P52790 923 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 ARPP19P56211 112 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 TRIM32Q13049 653 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 SCIMPQ6UWF3 145 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 SLC24A5Q71RS6 500 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 GPR141Q7Z602 305 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 IFNL1Q8IU54 200 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 OR56A4Q8NGH8 313 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 PPP1R14BQ96C90 147 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 EXOC2Q96KP1 924 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 SMIM14Q96QK8 99 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 ZBED2Q9BTP6 218 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 C1orf50Q9BV19 199 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 TDRD1Q9BXT4 1180 aaKnown RBP16.12■□□□□ 0.17
LTBR-201ENST00000228918 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.12■□□□□ 0.173e-6■■■□□ 16.6
LTBR-201ENST00000228918 CD320Q9NPF0 282 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 ZIM2Q9NZV7 527 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 ANAPC2Q9UJX6 822 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 MTMR11A4FU01 709 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 OR6C75A6NL08 312 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 INSIG1O15503 277 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 NIPSNAP2O75323 286 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 PRLP01236 227 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 ZDHHC11BP0C7U3 371 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 UMPSP11172 480 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 EMP3P54852 163 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 MTA1Q13330 715 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 TIGD2Q4W5G0 525 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 CTSL3PQ5NE16 218 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 PSAPL1Q6NUJ1 521 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 PIANPQ8IYJ0 282 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 SIDT2Q8NBJ9 832 aaKnown RBP16.12■□□□□ 0.17
LTBR-201ENST00000228918 FBXL20Q96IG2 436 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 RPL10LQ96L21 214 aaKnown RBP16.12■□□□□ 0.17
LTBR-201ENST00000228918 B3GALT6Q96L58 329 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 TMEM74Q96NL1 305 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 ACOX2Q99424 681 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 SEPT5Q99719 369 aaPredicted RBP16.12■□□□□ 0.17
LTBR-201ENST00000228918 INTS7Q9NVH2 962 aaKnown RBP16.12■□□□□ 0.17
LTBR-201ENST00000228918 SLAMF8Q9P0V8 285 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 VPS9D1Q9Y2B5 631 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 ASB1Q9Y576 335 aa16.12■□□□□ 0.17
LTBR-201ENST00000228918 FAM234BA2RU67 622 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 C2orf81A6NN90 581 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 ATP6V1G1O75348 118 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 VNN2O95498 520 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 IL12AP29459 219 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 ZNF157P51786 506 aaPredicted RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 KPNA1P52294 538 aaPredicted RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 DCTN2Q13561 401 aaKnown RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 FXNQ16595 210 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 FUT11Q495W5 492 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 FAM171A1Q5VUB5 890 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 GPRIN3Q6ZVF9 776 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 TBC1D21Q8IYX1 336 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 CD200R1Q8TD46 325 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 CYGBQ8WWM9 190 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 SPATA17Q96L03 361 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 EIF2B4Q9UI10 523 aaKnown RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 TRMT6Q9UJA5 497 aaKnown RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 ARIH1Q9Y4X5 557 aaPredicted RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 KANSL1LA0AUZ9 987 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 E2F3O00716 465 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 OR1I1O60431 355 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 CD9P21926 228 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 CES1P23141 567 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 HTR1EP28566 365 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 ESRRGP62508 458 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 ZBED5Q49AG3 693 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 AASDHQ4L235 1098 aaPredicted RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 C6orf136Q5SQH8 315 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 NANOGP8Q6NSW7 305 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 ESAMQ96AP7 390 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 LINGO1Q96FE5 620 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 FAM193BQ96PV7 902 aaPredicted RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 ZNF382Q96SR6 550 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 SPON2Q9BUD6 331 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 RPF2Q9H7B2 306 aaKnown RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 NANOGQ9H9S0 305 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 PFDN4Q9NQP4 134 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 RIC8BQ9NVN3 520 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 SMPD3Q9NY59 655 aaPredicted RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 SUN2Q9UH99 717 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 FKBPLQ9UIM3 349 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 USP22Q9UPT9 525 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 FADS3Q9Y5Q0 445 aa16.11■□□□□ 0.17
LTBR-201ENST00000228918 ZFP37Q9Y6Q3 630 aaPredicted RBP16.11■□□□□ 0.17
LTBR-201ENST00000228918 DYTNA2CJ06 578 aa16.1■□□□□ 0.17
LTBR-201ENST00000228918 H3BNC9 293 aa16.1■□□□□ 0.17
LTBR-201ENST00000228918 GIPC1O14908 333 aa16.1■□□□□ 0.17
LTBR-201ENST00000228918 CLOCKO15516 846 aa16.1■□□□□ 0.17
LTBR-201ENST00000228918 ACSL4O60488 711 aa16.1■□□□□ 0.17
LTBR-201ENST00000228918 SEC24DO94855 1032 aaPredicted RBP16.1■□□□□ 0.17
LTBR-201ENST00000228918 OR4F21O95013 312 aa16.1■□□□□ 0.17
LTBR-201ENST00000228918 CLIC3O95833 236 aa16.1■□□□□ 0.17
LTBR-201ENST00000228918 ENO2P09104 434 aaPredicted RBP16.1■□□□□ 0.17
LTBR-201ENST00000228918 LPOP22079 712 aaPredicted RBP16.1■□□□□ 0.17
LTBR-201ENST00000228918 HRH2P25021 359 aa16.1■□□□□ 0.17
LTBR-201ENST00000228918 VARSP26640 1264 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms