RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 AHSGP02765 367 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 ITGB6P18564 788 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 SOX9P48436 509 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 SEC13P55735 322 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 SULT2A1Q06520 285 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 GRIN2CQ14957 1233 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 TBCCQ15814 346 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 C5orf22Q49AR2 442 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 ARSIQ5FYB1 569 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 ANKRD54Q6NXT1 300 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 CNSTQ6PJW8 725 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 BNC2Q6ZN30 1099 aaPredicted RBP11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 LYSMD3Q7Z3D4 306 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 ZNF554Q86TJ5 538 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 CDCA3Q99618 268 aaPredicted RBP11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 RPP25Q9BUL9 199 aaKnown RBP11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 TRMT61BQ9BVS5 477 aaKnown RBP11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 C1orf21Q9H246 121 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 DYRK4Q9NR20 520 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 FKBPLQ9UIM3 349 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 ZMYM5Q9UJ78 669 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 DMTF1Q9Y222 760 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 PTPRDP23468 1912 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 CCDC162PA2VCL2 907 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 PLIN3O60664 434 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 CHRM3P20309 590 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 FMO4P31512 558 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 ADRA1AP35348 466 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 AP1S1P61966 158 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 C2orf27AQ580R0 203 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 PARM1Q6UWI2 310 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 NAPRTQ6XQN6 538 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 ZNF783Q6ZMS7 281 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 SUSD6Q92537 303 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 SORT1Q99523 831 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 MRPS26Q9BYN8 205 aaKnown RBP11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 TCF7L2Q9NQB0 619 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 STOML2Q9UJZ1 356 aa11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 ARIH1Q9Y4X5 557 aaPredicted RBP11.62□□□□□ -0.55
TNFAIP1-201ENST00000226225 FAM95CA0A1B0GW59 222 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 E5RI56 91 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 PFDN6O15212 129 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 GPR39O43194 453 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CLDN7O95471 211 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CLIC3O95833 236 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 EPHX1P07099 455 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 STMN1P16949 149 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 MTX3Q5HYI7 312 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 UTS2BQ765I0 119 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 AHI1Q8N157 1196 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 OR4L1Q8NH43 312 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CSGALNACT1Q8TDX6 532 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 OTUB2Q96DC9 234 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 MYADMQ96S97 322 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 IL1RL2Q9HB29 575 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 ZFYVE1Q9HBF4 777 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 SNX15Q9NRS6 342 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CATSPERZQ9NTU4 200 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 ELOVL2Q9NXB9 296 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 NDUFA13Q9P0J0 144 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CD84Q9UIB8 345 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CD3EAPO15446 510 aaKnown RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 POP4O95707 220 aaKnown RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CKMT2P17540 419 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 PFKLP17858 780 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CES1P23141 567 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 PIK3R1P27986 724 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 MC4RP32245 332 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 PLOD1Q02809 727 aaPredicted RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CSHL1Q14406 222 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CARD16Q5EG05 197 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 OGFRL1Q5TC84 451 aaPredicted RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 IL23RQ5VWK5 629 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 PGM2L1Q6PCE3 622 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 NUDT18Q6ZVK8 323 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 RBM12BQ8IXT5 1001 aaKnown RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 ZNF786Q8N393 782 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 ZNF557Q8N988 423 aaPredicted RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 LRTOMTQ8WZ04 291 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 POLR3BQ9NW08 1133 aaPredicted RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 GDE1Q9NZC3 331 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 LHX3Q9UBR4 397 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 EBF1Q9UH73 591 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 RSL24D1Q9UHA3 163 aaKnown RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CRLS1Q9UJA2 301 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 ATG2BQ96BY7 2078 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 SRP72O76094 671 aaKnown RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 BMP1P13497 986 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CDH2P19022 906 aaPredicted RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 MTTPP55157 894 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 SH3BGRP55822 239 aaPredicted RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 XKR5Q6UX68 686 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 C12orf40Q86WS4 652 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CPA6Q8N4T0 437 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 KYQ8NBH2 561 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 CDKN2AIPNLQ96HQ2 116 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 SUV39H2Q9H5I1 410 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 COQ10BQ9H8M1 238 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms