RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 SMOC2Q9H3U7 446 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 PSME2Q9UL46 239 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 NEUROG3Q9Y4Z2 214 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 ST14Q9Y5Y6 855 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 A0A1W2PQH9 124 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 UBA6A0AVT1 1052 aaPredicted RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 TRIM43BA6NCK2 446 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 IQCA1LA6NCM1 817 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 NPEPPSL1A6NEC2 478 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 CFAP99D6REC4 459 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 TOR1BO14657 336 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 ALDH2P05091 517 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 JUNBP17275 347 aaPredicted RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 HTR1BP28222 390 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 FMO4P31512 558 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 HALP42357 657 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 RENBPP51606 427 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 ALDH3A2P51648 485 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 SUOXP51687 545 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 CRYBB1P53674 252 aaPredicted RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 EMX2Q04743 252 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 UPP1Q16831 310 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 XKR7Q5GH72 579 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 ENPP6Q6UWR7 440 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 RNF168Q8IYW5 571 aaPredicted RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 CLEC4FQ8N1N0 589 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 ABHD11Q8NFV4 315 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 RHEBL1Q8TAI7 183 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 TRUB1Q8WWH5 349 aaKnown RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 FUBP1Q96AE4 644 aaKnown RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 MYEOVQ96EZ4 313 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 ITCHQ96J02 903 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 NSMCE3Q96MG7 304 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 BDH2Q9BUT1 245 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 FUNDC2Q9BWH2 189 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 ACTL8Q9H568 366 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 PAK1IP1Q9NWT1 392 aaPredicted RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.29□□□□□ -0.44
NUP88-201ENST00000225696 TMEM9Q9P0T7 183 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 RNF112Q9ULX5 631 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 SLC30A1Q9Y6M5 507 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 LOC285095A0A1B0GVY8 99 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 H0YAE9 185 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 BCAS1O75363 584 aaPredicted RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 B3GAT3O94766 335 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 INMTO95050 263 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 TBX18O95935 607 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 POMCP01189 267 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 THRBP10828 461 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 PRKACGP22612 351 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 HTR1EP28566 365 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 PCSK1P29120 753 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 KPNA1P52294 538 aaPredicted RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 HK3P52790 923 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 EEFSECP57772 596 aaKnown RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 IFITM3Q01628 133 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 DAG1Q14118 895 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 FXNQ16595 210 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 RGS21Q2M5E4 152 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 C18orf21Q32NC0 220 aaPredicted RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 C6orf136Q5SQH8 315 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 BROXQ5VW32 411 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 CD300LGQ6UXG3 332 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 AGMOQ6ZNB7 445 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 Q6ZSR9 355 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 ZNF683Q8IZ20 524 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 ABI1Q8IZP0 508 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 CDYL2Q8N8U2 506 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 PDZD8Q8NEN9 1154 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 OR52B6Q8NGF0 335 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 RSPH1Q8WYR4 309 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 IGSF8Q969P0 613 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 SLC35B4Q969S0 331 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 KIAA1191Q96A73 305 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 MBOAT4Q96T53 435 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 AARSD1Q9BTE6 412 aaKnown RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 BRINP2Q9C0B6 783 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 TFB2MQ9H5Q4 396 aaKnown RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 ABCC13Q9NSE7 274 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 GNPTGQ9UJJ9 305 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 FBXO10Q9UK96 956 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 PCDHB3Q9Y5E6 796 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 A0A0U1RQS6 177 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 TNFRSF10BO14763 440 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 KERAO60938 352 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 ABCB7O75027 752 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 RPS17P08708 135 aaKnown RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 UMPSP11172 480 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 CDH3P22223 829 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 ACVRL1P37023 503 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 MTHFRP42898 656 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 YWHAHQ04917 246 aaPredicted RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 PERM1Q5SV97 790 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 GPR142Q7Z601 462 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 THAP5Q7Z6K1 395 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 UMODL1-AS1Q8N2C9 162 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 TERB1Q8NA31 727 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 FNDC5Q8NAU1 212 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 OSCP1Q8WVF1 389 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 CNDP2Q96KP4 475 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms