RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 NOL11Q9H8H0 719 aaKnown RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 MINDY3Q9H8M7 445 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 PTPRJQ12913 1337 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 GSAPA4D1B5 854 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 IQCF5A8MTL0 148 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 FGF19O95750 216 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 LSM3P62310 102 aaKnown RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 XIAPP98170 497 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 VPS26BQ4G0F5 336 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 KCTD21Q4G0X4 260 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 ZNF618Q5T7W0 954 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 DLK2Q6UY11 383 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CNTRLQ7Z7A1 2325 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 ZBTB2Q8N680 514 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 ZNF671Q8TAW3 534 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 LPGAT1Q92604 370 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 SLC38A2Q96QD8 506 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 HBEGFQ99075 208 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 LPIN3Q9BQK8 851 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 EIF2B3Q9NR50 452 aaKnown RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 TRMT13Q9NUP7 481 aaKnown RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 MIOSQ9NXC5 875 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 N6AMT1Q9Y5N5 214 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 GNRH1P01148 92 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 IL1R2P27930 398 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 POLR2JP52435 117 aaKnown RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 ADARP55265 1226 aaKnown RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 CLDN10P78369 228 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 SPIBQ01892 262 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CBX2Q14781 532 aaPredicted RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 LPCAT4Q643R3 524 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 C11orf88Q6PI97 169 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 TMEM110Q86TL2 294 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 COMMD2Q86X83 199 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 ZNF781Q8N8C0 355 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 BANPQ8N9N5 519 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 GLIS1Q8NBF1 620 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 OR10G6Q8NH81 332 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 MYDGFQ969H8 173 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 NTAN1Q96AB6 310 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CAPNS2Q96L46 248 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 AGAP2Q99490 1192 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CIB1Q99828 191 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 RHOBTB2Q9BYZ6 727 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 MIR1-1HGQ9H1L0 117 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 S100A14Q9HCY8 104 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 DNAJC28Q9NX36 388 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CACNG4Q9UBN1 327 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CDH22Q9UJ99 828 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CAPN8A6NHC0 703 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 AGRPO00253 132 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 IRAK2O43187 625 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 NDUFS2O75306 463 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 POP4O95707 220 aaKnown RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 GOT2P00505 430 aaKnown RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 AQP1P29972 269 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 BUD31P41223 144 aaPredicted RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 CHRNA4P43681 627 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 OGDHQ02218 1023 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 ELP6Q0PNE2 266 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 COX10Q12887 443 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 MTX3Q5HYI7 312 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CLEC20AQ6ZU45 233 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 SAPCD2Q86UD0 394 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 HIPK1Q86Z02 1210 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 PGAM4Q8N0Y7 254 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 SMYD1Q8NB12 490 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 SLAIN1Q8ND83 568 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 FBXO22Q8NEZ5 403 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 AIF1LQ9BQI0 150 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 FNDC11Q9BVV2 318 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 RSPH9Q9H1X1 276 aaPredicted RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 EPB41L1Q9H4G0 881 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CLK4Q9HAZ1 481 aaKnown RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 AKAP7Q9P0M2 348 aaPredicted RBP11.43□□□□□ -0.58
NOD1-201ENST00000222823 CNTN6Q9UQ52 1028 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 FADS3Q9Y5Q0 445 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 CCL16O15467 120 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 WBP4O75554 376 aaKnown RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 CLDN9O95484 217 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 ESR1P03372 595 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 NELFEP18615 380 aaKnown RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 ADSLP30566 484 aaPredicted RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 ATP12AP54707 1039 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 ITGADQ13349 1161 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 CDCA2Q69YH5 1023 aaPredicted RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 KIAA0930Q6ICG6 404 aaPredicted RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 RINLQ6ZS11 566 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 PARGQ86W56 976 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 ZDHHC14Q8IZN3 488 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 BRI3BPQ8WY22 251 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 OLFM1Q99784 485 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 MRPS26Q9BYN8 205 aaKnown RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 DENND2DQ9H6A0 471 aaPredicted RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 SLC28A3Q9HAS3 691 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 FKBPLQ9UIM3 349 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 OR2AG2A6NM03 316 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 PRNPP04156 253 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms