RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 CLASP2O75122 1294 aaKnown RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 OLFM2O95897 454 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 HSD17B1P14061 328 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 PKMP14618 531 aaKnown RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 CDH2P19022 906 aaPredicted RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 ALDH3B2P48448 385 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 PRKCQQ04759 706 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 LCP2Q13094 533 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 PTPRNQ16849 979 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 KIF19Q2TAC6 998 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 INO80DQ53TQ3 878 aaPredicted RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 ZBTB49Q6ZSB9 765 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 ITIH5Q86UX2 942 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 AQP12AQ8IXF9 295 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 MYO1HQ8N1T3 1032 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 MIER2Q8N344 545 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 GOLM1Q8NBJ4 401 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 DIS3LQ8TF46 1054 aaKnown RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 TWIST2Q8WVJ9 160 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 GPR21Q99679 349 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.99■■□□□ 1.116e-6■■■■□ 24.2
CCDC9-201ENST00000221922 GMPR2Q9P2T1 348 aaKnown RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 TMCO1Q9UM00 188 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 COMMD10Q9Y6G5 202 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 GFRA2O00451 464 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 PPP6CO00743 305 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 TIPRLO75663 272 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 MATN4O95460 622 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 MC4RP32245 332 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 GRIA3P42263 894 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 SETMARQ53H47 684 aaPredicted RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 PITRM1Q5JRX3 1037 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 ANKS6Q68DC2 871 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 NCEH1Q6PIU2 408 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 PACRGLQ8N7B6 248 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 HJURPQ8NCD3 748 aaPredicted RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 PPWD1Q96BP3 646 aaKnown RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 CCT7Q99832 543 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 ZNF334Q9HCZ1 680 aaPredicted RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 MRPL17Q9NRX2 175 aaKnown RBP21.99■■□□□ 1.11
CCDC9-201ENST00000221922 MYRFQ9Y2G1 1151 aa21.99■■□□□ 1.11
CCDC9-201ENST00000221922 TYW5A2RUC4 315 aaKnown RBP21.98■■□□□ 1.11
CCDC9-201ENST00000221922 H3BSA7 217 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 H7C0S8 307 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 NR5A2O00482 541 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 STX16O14662 325 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 PIP5K1BO14986 540 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 GREM1O60565 184 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 EFCAB14O75071 495 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 VPS4BO75351 444 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 CD160O95971 181 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 EEF1DP29692 281 aaKnown RBP21.98■■□□□ 1.11
CCDC9-201ENST00000221922 SLC5A2P31639 672 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 CLCN4P51793 760 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 WDR5P61964 334 aaKnown RBP21.98■■□□□ 1.11
CCDC9-201ENST00000221922 CLCQ05315 142 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 TRAF2Q12933 501 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 TXNDC11Q6PKC3 985 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 SLC15A3Q8IY34 581 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 EFHBQ8N7U6 833 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 AUTS2Q8WXX7 1259 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 LRCH3Q96II8 777 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 IL21Q9HBE4 155 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 SDR39U1Q9NRG7 319 aaPredicted RBP21.98■■□□□ 1.11
CCDC9-201ENST00000221922 FKBPLQ9UIM3 349 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 TRMT6Q9UJA5 497 aaKnown RBP21.98■■□□□ 1.11
CCDC9-201ENST00000221922 KIAA1671Q9BY89 1806 aa21.98■■□□□ 1.11
CCDC9-201ENST00000221922 H0Y626 953 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 TBL1XO60907 577 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 ECI2O75521 394 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 CKMT2P17540 419 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 CAPN3P20807 821 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 FOXA1P55317 472 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 TUBA4AP68366 448 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 CREMQ03060 361 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 GRB7Q14451 532 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 SPATS1Q496A3 300 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 COQ5Q5HYK3 327 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 Q6ZNB5 142 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 TTC30BQ8N4P2 665 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 HM13Q8TCT9 377 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 ADAMTS19Q8TE59 1207 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 TRPC4APQ8TEL6 797 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 TFAP2CQ92754 450 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.97■■□□□ 1.11
CCDC9-201ENST00000221922 BIRC8Q96P09 236 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 SLC22A12Q96S37 553 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 TRIM15Q9C019 465 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 TUBB1Q9H4B7 451 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 PTGDR2Q9Y5Y4 395 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 FXYD1O00168 92 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 SOCS2O14508 198 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 HNRNPRO43390 633 aaKnown RBP21.97■■□□□ 1.11
CCDC9-201ENST00000221922 RPS17P08708 135 aaKnown RBP21.97■■□□□ 1.11
CCDC9-201ENST00000221922 PPM1AP35813 382 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 BNIP2Q12982 314 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 TSNQ15631 228 aaKnown RBP21.97■■□□□ 1.11
CCDC9-201ENST00000221922 VPS26BQ4G0F5 336 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 ZRANB3Q5FWF4 1079 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 INTS11Q5TA45 600 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms