RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 PCNAP12004 261 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 PSMA4P25789 261 aaKnown RBP14.48□□□□□ -0.09
CNOT3-201ENST00000221232 ATP4BP51164 291 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 CDH4P55283 916 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 IL27RAQ6UWB1 636 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 FAM151BQ6UXP7 276 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 METTL6Q8TCB7 284 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 TOP1MTQ969P6 601 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 ASB2Q96Q27 587 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 TTPALQ9BTX7 342 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 ALG2Q9H553 416 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 SMOXQ9NWM0 555 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 IRAK4Q9NWZ3 460 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 PLK2Q9NYY3 685 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 FFAR3O14843 346 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 GPR42O15529 346 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 TMCC1O94876 653 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 TSPAN12O95859 305 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 CHEK2O96017 543 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 SREBF2Q12772 1141 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 PLD1Q13393 1074 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 DYNC1I2Q13409 638 aaKnown RBP14.48□□□□□ -0.09
CNOT3-201ENST00000221232 LAMB3Q13751 1172 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 INPP5AQ14642 412 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 NHSL2Q5HYW2 709 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 OTUD3Q5T2D3 398 aaPredicted RBP14.48□□□□□ -0.09
CNOT3-201ENST00000221232 LETMD1Q6P1Q0 360 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 GPRIN3Q6ZVF9 776 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 CARM1Q86X55 608 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 CD200R1Q8TD46 325 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 MAGEE2Q8TD90 523 aaPredicted RBP14.48□□□□□ -0.09
CNOT3-201ENST00000221232 TMEM125Q96AQ2 219 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 RMND5BQ96G75 393 aaPredicted RBP14.48□□□□□ -0.09
CNOT3-201ENST00000221232 SCLYQ96I15 445 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 BOCQ9BWV1 1114 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 APOL5Q9BWW9 433 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 GPR63Q9BZJ6 419 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.48□□□□□ -0.097e-6■□□□□ 10.1
CNOT3-201ENST00000221232 MYRFQ9Y2G1 1151 aa14.48□□□□□ -0.09
CNOT3-201ENST00000221232 A0A1W2PP18 115 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 ZNF840PA6NDX5 716 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 MOXD2PA6NHM9 499 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 SYCE1LA8MT33 242 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 H0Y626 953 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 INPPL1O15357 1258 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 STC2O76061 302 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 TRIM16O95361 564 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 SEC24AO95486 1093 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 ESRRBO95718 433 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 CAPN1P07384 714 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 FASP25445 335 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 POLR2JP52435 117 aaKnown RBP14.47□□□□□ -0.09
CNOT3-201ENST00000221232 NR1H2P55055 460 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 MTPNP58546 118 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 ARF5P84085 180 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 PLCL1Q15111 1095 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 HECTD3Q5T447 861 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 HACD2Q6Y1H2 254 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 FRA10AC1Q70Z53 315 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 LRRC8DQ7L1W4 858 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 CHST15Q7LFX5 561 aaPredicted RBP14.47□□□□□ -0.09
CNOT3-201ENST00000221232 KIAA2013Q8IYS2 634 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 MINDY1Q8N5J2 469 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 EID2BQ96D98 161 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 VPS50Q96JG6 964 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 MRGBPQ9NV56 204 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 GREB1Q4ZG55 1949 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 BBIP1A8MTZ0 92 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 RPS17P08708 135 aaKnown RBP14.47□□□□□ -0.09
CNOT3-201ENST00000221232 UGT1A1P22309 533 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 UGT1A4P22310 534 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 SLC5A2P31639 672 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 UGT1A3P35503 534 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 UGT1A5P35504 534 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 YAP1P46937 504 aaKnown RBP14.47□□□□□ -0.09
CNOT3-201ENST00000221232 ATP6V0D1P61421 351 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 APOFQ13790 326 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 TGFBIQ15582 683 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 ZIK1Q3SY52 487 aaPredicted RBP14.47□□□□□ -0.09
CNOT3-201ENST00000221232 C6orf136Q5SQH8 315 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 KIAA1841Q6NSI8 718 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 TTC33Q6PID6 262 aaPredicted RBP14.47□□□□□ -0.09
CNOT3-201ENST00000221232 LYSMD3Q7Z3D4 306 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 CAMK1DQ8IU85 385 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 NKAPQ8N5F7 415 aaKnown RBP14.47□□□□□ -0.09
CNOT3-201ENST00000221232 MTFMTQ96DP5 389 aaKnown RBP14.47□□□□□ -0.09
CNOT3-201ENST00000221232 RNF145Q96MT1 663 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 NDUFA13Q9P0J0 144 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 SUN2Q9UH99 717 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 PCDHA9Q9Y5H5 950 aa14.47□□□□□ -0.09
CNOT3-201ENST00000221232 OAS3Q9Y6K5 1087 aaKnown RBP14.47□□□□□ -0.09
CNOT3-201ENST00000221232 COL4A4P53420 1690 aaPredicted RBP14.47□□□□□ -0.09
CNOT3-201ENST00000221232 H3BNH8 94 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 EI24O14681 340 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 UROSP10746 265 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 CR2P20023 1033 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 NANOGP8Q6NSW7 305 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 PPP4R4Q6NUP7 873 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 Q6ZSR9 355 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 ADGRG5Q8IZF4 528 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms