RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 LRRTM4Q86VH4 590 aa14.79□□□□□ -0.04
UPK3A-201ENST00000216211 RHOT1Q8IXI2 618 aa14.79□□□□□ -0.04
UPK3A-201ENST00000216211 CCDC170Q8IYT3 715 aa14.79□□□□□ -0.04
UPK3A-201ENST00000216211 PLEKHG4BQ96PX9 1271 aa14.79□□□□□ -0.04
UPK3A-201ENST00000216211 TEFMQ96QE5 360 aaKnown RBP14.79□□□□□ -0.04
UPK3A-201ENST00000216211 BPIFA1Q9NP55 256 aa14.79□□□□□ -0.04
UPK3A-201ENST00000216211 RAD18Q9NS91 495 aa14.79□□□□□ -0.04
UPK3A-201ENST00000216211 STARD5Q9NSY2 213 aa14.79□□□□□ -0.04
UPK3A-201ENST00000216211 DDX56Q9NY93 547 aaKnown RBP14.79□□□□□ -0.04
UPK3A-201ENST00000216211 NFKBIL1Q9UBC1 381 aaPredicted RBP14.79□□□□□ -0.04
UPK3A-201ENST00000216211 SAE1Q9UBE0 346 aaPredicted RBP14.79□□□□□ -0.04
UPK3A-201ENST00000216211 PILRAQ9UKJ1 303 aa14.79□□□□□ -0.04
UPK3A-201ENST00000216211 DNAJC16Q9Y2G8 782 aa14.79□□□□□ -0.04
UPK3A-201ENST00000216211 SPO11Q9Y5K1 396 aa14.79□□□□□ -0.04
UPK3A-201ENST00000216211 LILRA5A6NI73 299 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 AURKAO14965 403 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 KMOO15229 486 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 NDST3O95803 873 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 ZNF7P17097 686 aaPredicted RBP14.78□□□□□ -0.04
UPK3A-201ENST00000216211 BPIP17213 487 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 COMTP21964 271 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 PTPN3P26045 913 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 SLC1A1P43005 524 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 CLCNKAP51800 687 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 GFERP55789 205 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 NOMO1Q15155 1222 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 LLGL1Q15334 1064 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 SLC14A2Q15849 920 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 SEPT7Q16181 437 aaKnown RBP14.78□□□□□ -0.04
UPK3A-201ENST00000216211 LRRC38Q5VT99 294 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 PDPK2PQ6A1A2 396 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 CCDC70Q6NSX1 233 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 CEACAM20Q6UY09 585 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 C16orf45Q96MC5 204 aaPredicted RBP14.78□□□□□ -0.04
UPK3A-201ENST00000216211 TRIM4Q9C037 500 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 OGFRQ9NZT2 677 aa14.78□□□□□ -0.04
UPK3A-201ENST00000216211 EPN1Q9Y6I3 576 aaPredicted RBP14.78□□□□□ -0.04
UPK3A-201ENST00000216211 MN1Q10571 1320 aaPredicted RBP14.77□□□□□ -0.04
UPK3A-201ENST00000216211 LOC101059948A0A1B0GTJ6 334 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 GPR89AB7ZAQ6 455 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 SPOPO43791 374 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 VIPP01282 170 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 GPR89BP0CG08 455 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 SFTPCP11686 197 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 PECAM1P16284 738 aaPredicted RBP14.77□□□□□ -0.05
UPK3A-201ENST00000216211 TYRP1P17643 537 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 XRCC1P18887 633 aaPredicted RBP14.77□□□□□ -0.05
UPK3A-201ENST00000216211 CD68P34810 354 aaPredicted RBP14.77□□□□□ -0.05
UPK3A-201ENST00000216211 SLC19A1P41440 591 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 CDKN2BP42772 138 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 PRKD1Q15139 912 aaPredicted RBP14.77□□□□□ -0.05
UPK3A-201ENST00000216211 KHDC1Q4VXA5 237 aaKnown RBP14.77□□□□□ -0.05
UPK3A-201ENST00000216211 KAZNQ674X7 775 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 TIPARPQ7Z3E1 657 aaKnown RBP14.77□□□□□ -0.05
UPK3A-201ENST00000216211 TRIM48Q8IWZ4 208 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 NLGN4XQ8N0W4 816 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 AVL9Q8NBF6 648 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 NLGN4YQ8NFZ3 816 aaPredicted RBP14.77□□□□□ -0.05
UPK3A-201ENST00000216211 TEKT5Q96M29 485 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 SPRY4Q9C004 299 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 EPB41L1Q9H4G0 881 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 FBXO8Q9NRD0 319 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 ZNF624Q9P2J8 865 aaPredicted RBP14.77□□□□□ -0.05
UPK3A-201ENST00000216211 TMPRSS11EQ9UL52 423 aa14.77□□□□□ -0.05
UPK3A-201ENST00000216211 TLN1Q9Y490 2541 aaKnown RBP14.77□□□□□ -0.05
UPK3A-201ENST00000216211 PDZK1P1A8MUH7 402 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 F5H423 210 aaPredicted RBP14.76□□□□□ -0.05
UPK3A-201ENST00000216211 VEGFDO43915 354 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 CST8O60676 142 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 PPFIA2O75334 1257 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 CDK14O94921 469 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 NDUFA10O95299 355 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 WISP1O95388 367 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 NFKB1P19838 968 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 RPL10P27635 214 aaKnown RBP14.76□□□□□ -0.05
UPK3A-201ENST00000216211 CYLC1P35663 651 aaPredicted RBP14.76□□□□□ -0.05
UPK3A-201ENST00000216211 ADCY2Q08462 1091 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 WASHC5Q12768 1159 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 ATP13A5Q4VNC0 1218 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 BORAQ6PGQ7 559 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 SPOCD1Q6ZMY3 1216 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 TMEM26Q6ZUK4 368 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 PLXDC1Q8IUK5 500 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 ZNF547Q8IVP9 402 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 UNC5BQ8IZJ1 945 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 GDAP1Q8TB36 358 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 TFB1MQ8WVM0 346 aaKnown RBP14.76□□□□□ -0.05
UPK3A-201ENST00000216211 RNF31Q96EP0 1072 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 C9orf72Q96LT7 481 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 SRPK1Q96SB4 655 aaKnown RBP14.76□□□□□ -0.05
UPK3A-201ENST00000216211 ZPBPQ9BS86 351 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 TIMM29Q9BSF4 260 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 DESI2Q9BSY9 194 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 CLMPQ9H6B4 373 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 GPN2Q9H9Y4 310 aaPredicted RBP14.76□□□□□ -0.05
UPK3A-201ENST00000216211 UCK1Q9HA47 277 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 TRIM10Q9UDY6 481 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 SLC30A1Q9Y6M5 507 aa14.76□□□□□ -0.05
UPK3A-201ENST00000216211 PRR19A6NJB7 356 aa14.75□□□□□ -0.05
UPK3A-201ENST00000216211 ZNF891A8MT65 544 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms