RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 POLD2P49005 469 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 SF3A2Q15428 464 aaKnown RBP19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 SMAD1Q15797 465 aaKnown RBP19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 WDR93Q6P2C0 686 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 ZNF449Q6P9G9 518 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 PACS1Q6VY07 963 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 C3orf62Q6ZUJ4 267 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 ASCL5Q7RTU5 278 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 MINDY1Q8N5J2 469 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 OR1E3Q8WZA6 343 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 OR2M4Q96R27 311 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 EDEM2Q9BV94 578 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 NSMCE4AQ9NXX6 385 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 IL1RAPL1Q9NZN1 696 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 SPASTQ9UBP0 616 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 ZNHIT2Q9UHR6 403 aa19.95■□□□□ 0.78
RHBDD3-201ENST00000216085 EP300Q09472 2414 aaPredicted RBP19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 IGLV3-16A0A075B6K0 115 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 PRSS56P0CW18 603 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 ATP1B2P14415 290 aaPredicted RBP19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 ZNF8P17098 575 aaPredicted RBP19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 MGAT5Q09328 741 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 TYSND1Q2T9J0 566 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 ZNF542PQ5EBM4 170 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 LRRTM4Q86VH4 590 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 CILP2Q8IUL8 1156 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 FSTL5Q8N475 847 aaPredicted RBP19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 SCARF2Q96GP6 870 aaPredicted RBP19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 TSSK1BQ9BXA7 367 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 CLPBQ9H078 707 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 MRPL40Q9NQ50 206 aaKnown RBP19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 IARS2Q9NSE4 1012 aaKnown RBP19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 INTS10Q9NVR2 710 aaKnown RBP19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 MARCH4Q9P2E8 410 aaPredicted RBP19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 GPR34Q9UPC5 381 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 GPSM3Q9Y4H4 160 aa19.94■□□□□ 0.78
RHBDD3-201ENST00000216085 A0A1B0GTQ1 180 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 KMOO15229 486 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 GRID2O43424 1007 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 AP2A2O94973 939 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 ERVK-10P10266 1014 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 VCLP18206 1134 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 SSTR1P30872 391 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 LRP8Q14114 963 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 ELOCQ15369 112 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 ZNF648Q5T619 568 aaPredicted RBP19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 KIAA0408Q6ZU52 694 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 LRRC6Q86X45 466 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 DCLK2Q8N568 766 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 TMEM9BQ9NQ34 198 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 TRNAU1APQ9NX07 287 aaKnown RBP19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 PCDH15Q96QU1 1955 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 TP53BP1Q12888 1972 aaPredicted RBP19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 KLHL33A6NCF5 533 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 CHUKO15111 745 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 GFRA3O60609 400 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 DNAJC6O75061 913 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 OR56A5P0C7T3 313 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 ILF3Q12906 894 aaKnown RBP eCLIP19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 SUZ12Q15022 739 aaKnown RBP19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 KHDC1Q4VXA5 237 aaKnown RBP19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 CCNI2Q6ZMN8 369 aaPredicted RBP19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 CYS1Q717R9 158 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 CNTN4Q8IWV2 1026 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 SDR16C5Q8N3Y7 309 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 RASGEF1AQ8N9B8 481 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 CDC42EP4Q9H3Q1 356 aaKnown RBP19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 LRRC4CQ9HCJ2 640 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 TXNDC16Q9P2K2 825 aa19.93■□□□□ 0.78
RHBDD3-201ENST00000216085 RIF1Q5UIP0 2472 aaKnown RBP19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 UBA6A0AVT1 1052 aaPredicted RBP19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 NEMP2A6NFY4 417 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 PRMT5O14744 637 aaPredicted RBP19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 ZNF883P0CG24 379 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 EPHA8P29322 1005 aaPredicted RBP19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 CA5AP35218 305 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 SLC1A2P43004 574 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 VSNL1P62760 191 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 ILF2Q12905 390 aaKnown RBP19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 SEMA3AQ14563 771 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 INAVAQ3KP66 663 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 PYCR3Q53H96 274 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 PRRT3Q5FWE3 981 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 PRAMEF14Q5SWL7 426 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 CRTC3Q6UUV7 619 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 TRMT10CQ7L0Y3 403 aaKnown RBP19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 DET1Q7L5Y6 550 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 GSPT2Q8IYD1 628 aaKnown RBP19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 GSDMCQ9BYG8 508 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 CCDC68Q9H2F9 335 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 PARD6AQ9NPB6 346 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 MOCS1Q9NZB8 636 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 NINJ2Q9NZG7 142 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 GNPTGQ9UJJ9 305 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 FBXO5Q9UKT4 447 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 DOLKQ9UPQ8 538 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 DNMT3AQ9Y6K1 912 aaPredicted RBP19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 PLXNB3Q9ULL4 1909 aa19.92■□□□□ 0.78
RHBDD3-201ENST00000216085 TCRBV9S1A1TA0A576 114 aa19.91■□□□□ 0.78
RHBDD3-201ENST00000216085 OR2AG2A6NM03 316 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms