RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CLDN25C9JDP6 229 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 UPK3BL2E5RIL1 263 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 KPNA4O00629 521 aaPredicted RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 TBX1O43435 398 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 DEAF1O75398 565 aaPredicted RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 CHEK2O96017 543 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 AXLP30530 894 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 HK2P52789 917 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 HERVK_113P63132 956 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 SMN1Q16637 294 aaKnown RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 AQP12AQ8IXF9 295 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 DTWD1Q8N5C7 304 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 METTL6Q8TCB7 284 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 SEMA3CQ99985 751 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 APOL5Q9BWW9 433 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ERVK-6Q9BXR3 956 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ABHD16BQ9H3Z7 469 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ATAD3AQ9NVI7 634 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ABI2Q9NYB9 513 aaPredicted RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 AFF4Q9UHB7 1163 aaKnown RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 POLR3HQ9Y535 204 aaPredicted RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ASB1Q9Y576 335 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 MAFKO60675 156 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 TCEA1P23193 301 aaKnown RBP16.6■□□□□ 0.25
CTDP1-201ENST00000075430 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 ZNF362Q5T0B9 420 aaPredicted RBP16.6■□□□□ 0.25
CTDP1-201ENST00000075430 CILP2Q8IUL8 1156 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 DCP1BQ8IZD4 617 aaKnown RBP16.6■□□□□ 0.25
CTDP1-201ENST00000075430 UBE2FQ969M7 185 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 AGO3Q9H9G7 860 aaKnown RBP16.6■□□□□ 0.25
CTDP1-201ENST00000075430 NRCAMQ92823 1304 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 CCDC162PA2VCL2 907 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 A8MV72 311 aaPredicted RBP16.6■□□□□ 0.25
CTDP1-201ENST00000075430 PIRO00625 290 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 TLR5O60602 858 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 SLC2A4P14672 509 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 DCKP27707 260 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 HTR6P50406 440 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 PTGR1Q14914 329 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 GNASQ5JWF2 1037 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 ANKS6Q68DC2 871 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 TAS2R42Q7RTR8 314 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 HMCESQ96FZ2 354 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 VAT1Q99536 393 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 GPR21Q99679 349 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 ADGRE2Q9UHX3 823 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 PDE10AQ9Y233 779 aa16.6■□□□□ 0.25
CTDP1-201ENST00000075430 OAS3Q9Y6K5 1087 aaKnown RBP16.6■□□□□ 0.25
CTDP1-201ENST00000075430 DFNA5O60443 496 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 DBTP11182 482 aaKnown RBP16.59■□□□□ 0.25
CTDP1-201ENST00000075430 CD47Q08722 323 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 EFEMP1Q12805 493 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 TRIP4Q15650 581 aaPredicted RBP16.59■□□□□ 0.25
CTDP1-201ENST00000075430 TBC1D21Q8IYX1 336 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 C3orf58Q8NDZ4 430 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 SLC22A17Q8WUG5 538 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 BRI3BPQ8WY22 251 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 ROPN1LQ96C74 230 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 RERGLQ9H628 205 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 HACD3Q9P035 362 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 NOD1Q9Y239 953 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 LOC100506127A0A0U1RQW1 187 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 NDUFB5O43674 189 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 CAPN15O75808 1086 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 MBL2P11226 248 aaPredicted RBP16.59■□□□□ 0.25
CTDP1-201ENST00000075430 HLCSP50747 726 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 CLCN5P51795 746 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 DGKEP52429 567 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 INTS11Q5TA45 600 aaKnown RBP16.59■□□□□ 0.25
CTDP1-201ENST00000075430 ZNF773Q6PK81 442 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 SPARTQ8N0X7 666 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 CALML6Q8TD86 181 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.59■□□□□ 0.25
CTDP1-201ENST00000075430 CPQQ9Y646 472 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 SOAT2O75908 522 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 PRKD3O94806 890 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 G6PDP11413 515 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 IL12AP29459 219 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 HMGCS1Q01581 520 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 SEMA3AQ14563 771 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 PTPRNQ16849 979 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 ZNF792Q3KQV3 632 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 MFSD4BQ5TF39 518 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 DET1Q7L5Y6 550 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 ARHGAP12Q8IWW6 846 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 MFSD2AQ8NA29 543 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 OR13J1Q8NGT2 312 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 OSCP1Q8WVF1 389 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 FEM1CQ96JP0 617 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 ALOXE3Q9BYJ1 711 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 IKZF3Q9UKT9 509 aa16.59■□□□□ 0.25
CTDP1-201ENST00000075430 RRN3P2A6NIE6 340 aa16.58■□□□□ 0.25
CTDP1-201ENST00000075430 CD3EAPO15446 510 aaKnown RBP16.58■□□□□ 0.25
CTDP1-201ENST00000075430 NIPSNAP2O75323 286 aa16.58■□□□□ 0.25
CTDP1-201ENST00000075430 NDUFS3O75489 264 aa16.58■□□□□ 0.25
CTDP1-201ENST00000075430 LRATO95237 230 aa16.58■□□□□ 0.25
CTDP1-201ENST00000075430 B3GALT4O96024 378 aa16.58■□□□□ 0.25
CTDP1-201ENST00000075430 GDF5P43026 501 aa16.58■□□□□ 0.25
CTDP1-201ENST00000075430 BNIP2Q12982 314 aa16.58■□□□□ 0.25
CTDP1-201ENST00000075430 BTG3Q14201 252 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms