RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PRMT9Q6P2P2 845 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 TMEM154Q6P9G4 183 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 CYHR1Q6ZMK1 362 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 SPATA19Q7Z5L4 167 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PDSS2Q86YH6 399 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 ZNF557Q8N988 423 aaPredicted RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 ICA1LQ8NDH6 482 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PDLIM5Q96HC4 596 aaKnown RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 NR1H4Q96RI1 486 aaPredicted RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 CCT7Q99832 543 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 EIF2B4Q9UI10 523 aaKnown RBP8.18□□□□□ -1.1
VAMP3-201ENST00000054666 SARDHQ9UL12 918 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 NDUFAF1Q9Y375 327 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 PTGDR2Q9Y5Y4 395 aa8.18□□□□□ -1.1
VAMP3-201ENST00000054666 IQCF5A8MTL0 148 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 FBP2O00757 339 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 CCL16O15467 120 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 MATN4O95460 622 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 PRAMEF12O95522 483 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 CXCL14O95715 111 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 HSPA8P11142 646 aaKnown RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 GJA1P17302 382 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 GPX3P22352 226 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 DGKAP23743 735 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 ACRV1P26436 265 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 AGTR2P50052 363 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 LRRC26Q2I0M4 334 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 TTLL9Q3SXZ7 439 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 GPR33Q49SQ1 333 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 PITRM1Q5JRX3 1037 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 LPCAT4Q643R3 524 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 OGFOD2Q6N063 350 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 C22orf39Q6P5X5 142 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 LAYNQ6UX15 382 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 OTOP2Q7RTS6 562 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 TMEM126BQ8IUX1 230 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 APLFQ8IW19 511 aaPredicted RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 SNX31Q8N9S9 440 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 GRIN3AQ8TCU5 1115 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 ASIC4Q96FT7 647 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 TUBGCP5Q96RT8 1024 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 ZNF382Q96SR6 550 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 FAM126AQ9BYI3 521 aaPredicted RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 CIPCQ9C0C6 399 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 ZDHHC7Q9NXF8 308 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 TSR3Q9UJK0 312 aaKnown RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 DTNAQ9Y4J8 743 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 HELZP42694 1942 aaKnown RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 ZNF106Q9H2Y7 1883 aaKnown RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 E7ENX8 843 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 GRM6O15303 877 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 PEX1O43933 1283 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 BNIP3LO60238 219 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 CSPG5O95196 566 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 TRIM16O95361 564 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 CLDN7O95471 211 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 FGF19O95750 216 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 DDX6P26196 483 aaKnown RBP eCLIP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 GKP32189 559 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 HNF1BP35680 557 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 ATXN3P54252 364 aaPredicted RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 NME5P56597 212 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 KCNK10P57789 538 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 ADGRE1Q14246 886 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 TRIM25Q14258 630 aaKnown RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 GRB7Q14451 532 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 ARHGAP15Q53QZ3 475 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 SYVN1Q86TM6 617 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 PHYKPLQ8IUZ5 450 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 CMTM8Q8IZV2 173 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 ATP6V1E2Q96A05 226 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 EID2BQ96D98 161 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 PAWRQ96IZ0 340 aaKnown RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 RPL10LQ96L21 214 aaKnown RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 TCF25Q9BQ70 676 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 HTATIP2Q9BUP3 242 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 LRRC3Q9BY71 257 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 TRIM15Q9C019 465 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 TUBB1Q9H4B7 451 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 Q9H521 79 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 SDR39U1Q9NRG7 319 aaPredicted RBP8.17□□□□□ -1.1
VAMP3-201ENST00000054666 GID8Q9NWU2 228 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 GIMAP2Q9UG22 337 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 SUN2Q9UH99 717 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 TIMM22Q9Y584 194 aa8.17□□□□□ -1.1
VAMP3-201ENST00000054666 SCN8AQ9UQD0 1980 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 TRIM43BA6NCK2 446 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 E2F3O00716 465 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 KIAA0355O15063 1070 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 TRIM24O15164 1050 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 FFAR2O15552 330 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 SRCP12931 536 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 BPIP17213 487 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 ITGB6P18564 788 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 ITGB8P26012 769 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 MSX2P35548 267 aaPredicted RBP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 STK19P49842 368 aaPredicted RBP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 SLC7A2P52569 658 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 HK3P52790 923 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 PTPN5P54829 565 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms