RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 RBM12BQ8IXT5 1001 aaKnown RBP15.64■□□□□ 0.09
ERCC1-201ENST00000013807 SPATA22Q8NHS9 363 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 RNF25Q96BH1 459 aaPredicted RBP15.64■□□□□ 0.09
ERCC1-201ENST00000013807 C9orf72Q96LT7 481 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 TBC1D10AQ9BXI6 508 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 CEP41Q9BYV8 373 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 GPR63Q9BZJ6 419 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 RAB33BQ9H082 229 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 CLMPQ9H6B4 373 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 SLC40A1Q9NP59 571 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 SPTLC3Q9NUV7 552 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 POT1Q9NUX5 634 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.64■□□□□ 0.09
ERCC1-201ENST00000013807 SCHIP1Q9P0W5 487 aaPredicted RBP15.64■□□□□ 0.09
ERCC1-201ENST00000013807 HECTD1Q9ULT8 2610 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 MAST4O15021 2626 aa15.64■□□□□ 0.09
ERCC1-201ENST00000013807 SEC16AO15027 2179 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 A8MU76 341 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 POLR1CO15160 346 aaPredicted RBP15.63■□□□□ 0.09
ERCC1-201ENST00000013807 SNX2O60749 519 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 PPFIA2O75334 1257 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 CDK14O94921 469 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 DLGAP3O95886 979 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 KRT1P04264 644 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 TPM1P09493 284 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 BRAFP15056 766 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 CD68P34810 354 aaPredicted RBP15.63■□□□□ 0.09
ERCC1-201ENST00000013807 ZNF648Q5T619 568 aaPredicted RBP15.63■□□□□ 0.09
ERCC1-201ENST00000013807 ZDHHC20Q5W0Z9 365 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 ALS2CLQ60I27 953 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 KDELC1Q6UW63 502 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 ATG14Q6ZNE5 492 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 KDELC2Q7Z4H8 507 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 BRSK1Q8TDC3 778 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 VAT1Q99536 393 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 ARFGAP3Q9NP61 516 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 SEMA5BQ9P283 1151 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 EPHA6Q9UF33 1036 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 FAM153AQ9UHL3 310 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 SPO11Q9Y5K1 396 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 HEMK1Q9Y5R4 338 aaPredicted RBP15.63■□□□□ 0.09
ERCC1-201ENST00000013807 NAV2Q8IVL1 2488 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 PIKFYVEQ9Y2I7 2098 aa15.63■□□□□ 0.09
ERCC1-201ENST00000013807 GOLGA6L3A6NEY3 463 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 AURKAO14965 403 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 PSTPIP1O43586 416 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 UBXN7O94888 489 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 COMTP21964 271 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 DMPKQ09013 629 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 TMEM115Q12893 351 aaPredicted RBP15.62■□□□□ 0.09
ERCC1-201ENST00000013807 TBX2Q13207 712 aaPredicted RBP15.62■□□□□ 0.09
ERCC1-201ENST00000013807 PCSK7Q16549 785 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 INSCQ1MX18 579 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 SKOR2Q2VWA4 1001 aaPredicted RBP15.62■□□□□ 0.09
ERCC1-201ENST00000013807 ATP13A5Q4VNC0 1218 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 KHDC1Q4VXA5 237 aaKnown RBP15.62■□□□□ 0.09
ERCC1-201ENST00000013807 SNAP47Q5SQN1 464 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 RFX6Q8HWS3 928 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 CNGA4Q8IV77 575 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 TTC30BQ8N4P2 665 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 TFB1MQ8WVM0 346 aaKnown RBP15.62■□□□□ 0.09
ERCC1-201ENST00000013807 FCRL5Q96RD9 977 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 ZNF768Q9H5H4 540 aaKnown RBP15.62■□□□□ 0.09
ERCC1-201ENST00000013807 APMAPQ9HDC9 416 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 IL26Q9NPH9 171 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 HACD3Q9P035 362 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 IL17CQ9P0M4 197 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 IL17BQ9UHF5 180 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 ALG6Q9Y672 507 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 SLC30A1Q9Y6M5 507 aa15.62■□□□□ 0.09
ERCC1-201ENST00000013807 LOC101059948A0A1B0GTJ6 334 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 CST8O60676 142 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 PMPCBO75439 489 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 STK17BO94768 372 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 LCA5LO95447 670 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 VIPP01282 170 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 IDSP22304 550 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 NOP2P46087 812 aaKnown RBP15.61■□□□□ 0.09
ERCC1-201ENST00000013807 IL11RAQ14626 422 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 ODF2Q5BJF6 829 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 TFDP3Q5H9I0 405 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 FAM182AQ5T1J6 154 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 PRICKLE2Q7Z3G6 844 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 KIAA1143Q96AT1 154 aaPredicted RBP15.61■□□□□ 0.09
ERCC1-201ENST00000013807 CTRCQ99895 268 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 ANP32EQ9BTT0 268 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 ZMYND15Q9H091 742 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 OSGEPL1Q9H4B0 414 aa15.61■□□□□ 0.09
ERCC1-201ENST00000013807 GPN2Q9H9Y4 310 aaPredicted RBP15.61■□□□□ 0.09
ERCC1-201ENST00000013807 SAE1Q9UBE0 346 aaPredicted RBP15.61■□□□□ 0.09
ERCC1-201ENST00000013807 DNMT3AQ9Y6K1 912 aaPredicted RBP15.61■□□□□ 0.09
ERCC1-201ENST00000013807 PECAM1P16284 738 aaPredicted RBP15.6■□□□□ 0.09
ERCC1-201ENST00000013807 STAT5AP42229 794 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 CCR10P46092 362 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 GFERP55789 205 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 POLE2P56282 527 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 WNT3AP56704 352 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 DYNLT1P63172 113 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 MC1RQ01726 317 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 ADCY2Q08462 1091 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms