RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Hat1Q8BY71 416 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Micu1Q8VCX5 477 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Olfr474Q8VFC9 310 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 DgkgQ91WG7 788 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Rin1Q921Q7 763 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Fam45aQ9D8N2 357 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 NckipsdQ9ESJ4 714 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mageb4A2A9R3 556 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Sema3aO08665 772 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 EdnrbP48302 442 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Krt76Q3UV17 594 aaKnown RBP15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 AbrQ5SSL4 859 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Fam169aQ5XG69 665 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tmem209Q8BRG8 561 aaKnown RBP15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Asb2Q8K0L0 634 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Arl2Q9D0J4 184 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Paqr5Q9DCU0 330 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ralgps2Q9ERD6 590 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Sae1Q9R1T2 350 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Greb1lB9EJV3 1913 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm28363A0A087WQW2 129 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Rnf169E9Q7F2 694 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 PrnpP04925 254 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Slc6a13P31649 602 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 TktP40142 623 aaKnown RBP15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Nlgn2Q69ZK9 836 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Rps27lQ6ZWY3 84 aaKnown RBP15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 R3hcc1lQ8BJM3 775 aaKnown RBP15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Svs2Q8BS30 375 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Wdsub1Q9D0I6 474 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Slc25a14Q9Z2B2 325 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 AccsA2AIG8 502 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 SmoktcrA2KF29 484 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gml2G5E8L7 176 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 P01650 108 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 P01653 108 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cbx3P23198 183 aaKnown RBP15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Znf865Q3U3I9 1058 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cfhr2Q4LDF6 332 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Slc43a1Q8BSM7 564 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Fam163bQ8BUM6 167 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 4931406P16RikQ8C5X1 1059 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Nck1Q99M51 377 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Trim8Q99PJ2 551 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Atp6v1g1Q9CR51 118 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Q9D3J9 298 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Bloc1s6Q9R0C0 172 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Rps24P62849 133 aaKnown RBP15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Dlx3Q64205 287 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Klhl5Q6PFE1 708 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Olfr1152Q7TR34 310 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 PvrQ8K094 408 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Slco1a5Q91YY5 670 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gpn3Q9D3W4 284 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Col2a1P28481 1487 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Smpd2O70572 419 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tead2P48301 445 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tsc22d1P62500 1077 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Nudcd1Q6PIP5 582 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Svs1Q6WIZ7 820 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 MtdhQ80WJ7 579 aaKnown RBP15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tmem121Q80XA0 318 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ubash3bQ8BGG7 638 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Isl2Q9CXV0 359 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tex22Q9D9U4 189 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Nmnat1Q9EPA7 285 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Olfr742A2RTP5 311 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Reps1O54916 795 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 SiaeP70665 541 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Foxr1Q3UTB7 268 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 2900092C05RikQ5I0V9 184 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Kcna4Q61423 654 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 TsnQ62348 228 aaKnown RBP15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Man1c1Q6NXK9 625 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Q8BH50 245 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Usp45Q8K387 813 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Prrg2Q8R182 198 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 2610042L04RikQ9D073 150 aa15.42■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm13089A2AGW7 455 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 NfycP70353 335 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Irf7P70434 457 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Klra8Q60682 266 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cep78Q6IRU7 790 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mrps26Q80ZS3 200 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Q8BL95 290 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Slc7a4Q8BLQ7 635 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Slco6c1Q8C0X7 706 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Psapl1Q8C1C1 522 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ifnl3Q8CGK6 193 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tma7Q8K003 64 aaKnown RBP15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Far1Q922J9 515 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cyp4f13Q99N19 523 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Serpinb1aQ9D154 379 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm45233A0A0N4SVE0 221 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Znf518bB2RRE4 1077 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Zscan4bE9Q3G0 505 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 CenpcP49452 906 aaKnown RBP15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Brsk1Q5RJI5 778 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Lag3Q61790 521 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Vwa2Q70UZ7 791 aa15.41■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms