RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Gpr174Q3U507 335 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 LchnQ3UHG7 455 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vwa3aQ3UVV9 1148 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 CfiQ61129 603 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Lingo3Q6GQU6 589 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 PapolgQ6PCL9 739 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mtmr12Q80TA6 747 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc4a7Q8BTY2 1034 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 IlvblQ8BU33 632 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc35e2Q8C811 405 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slfn5Q8CBA2 884 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ddx52Q8K301 598 aaKnown RBP9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Stard7Q8R1R3 373 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 EsamQ925F2 394 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 KlbQ99N32 1043 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tspan17Q9D7W4 270 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rnf14Q9JI90 485 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Stap1Q9JM90 297 aaKnown RBP9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tmem115Q9WUH1 350 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gria4Q9Z2W8 902 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Keap1Q9Z2X8 624 aaKnown RBP9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 1700025B11RikA0A087WNZ6 93 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm13023A2A8N2 498 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Klhl15A2AAX3 604 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 LexmA2AVQ5 414 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr1305A2AVW3 312 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Lrrc63A6H694 637 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hsbp1l1B2RXB2 72 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 D830030K20RikE9PYQ5 218 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Maml2F6U238 1170 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zfp141G3UY09 685 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vmn2r38G3UYA8 861 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Shisa8J3QNX5 399 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm3043K7N693 218 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vmn2r33K7N705 861 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 NapsaO09043 419 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 NsmafO35242 920 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Prl6a1O35257 230 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gstm6O35660 218 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mapkapk5O54992 473 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Prkar1bP12849 381 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 CrklP47941 303 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ptpn5P54830 541 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Entpd1P55772 510 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 CtswP56203 371 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Isl1P61372 349 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 SnrpfP62307 86 aaKnown RBP9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 NfibP97863 570 aaKnown RBP9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ankrd53Q3V0J4 497 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Larp4bQ6A0A2 741 aaKnown RBP9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tas2r102Q7M717 329 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Adam39Q7M762 756 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ldoc1Q7TPY9 151 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr1101Q7TR59 310 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Got1l1Q7TSV6 404 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hyal5Q812F3 526 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Nars2Q8BGV0 477 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc9a7Q8BLV3 726 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 LipmQ8K2A6 422 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Casc3Q8K3W3 698 aaKnown RBP9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Prokr2Q8K458 381 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tmem82Q8R115 356 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Setd7Q8VHL1 366 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Trim8Q99PJ2 551 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Sp2Q9D2H6 612 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Lrrc46Q9DAP0 323 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 TrmuQ9DAT5 417 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gpr63Q9EQQ3 425 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pidd1Q9ERV7 915 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm5751A2AHC8 147 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm11127A7VMS2 374 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Skint2A7XUX6 400 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm3095E9Q058 166 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm42421F6X8D5 166 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Cops3O88543 423 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 AfmO89020 608 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 H2-D1P14427 368 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Dynlt1P51807 113 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Xlr4cQ3TKR2 215 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Q3TYS2 187 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm5592Q3V0A6 857 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mrm3Q5ND52 418 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 OclnQ61146 521 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Laptm5Q61168 261 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Msantd2Q6NZR2 559 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tnpo3Q6P2B1 923 aaKnown RBP9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Prrg3Q6PAQ9 231 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zc3hc1Q80YV2 501 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc6a17Q8BJI1 727 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Fam131aQ8BWU3 361 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 TpbglQ8C013 384 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Frs2Q8C180 508 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Trmt6Q8CE96 497 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Smtnl2Q8CI12 456 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 St7lQ8K4P7 559 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tspan8Q8R3G9 235 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vps39Q8R5L3 886 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Paip1Q8VE62 400 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Sfxn2Q925N2 322 aa9.65□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rpl17Q9CPR4 184 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms