RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 MipepA6H611 711 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Sod3O09164 251 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Grk6O70293 576 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 NagluO88325 739 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Tk1P04184 233 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Mup11P04938 181 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Tcea3P23881 347 aaKnown RBP18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 PpargP37238 505 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Atxn1P54254 791 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Defb48Q3UW22 87 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Gm21320Q4FZE8 181 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Prr18Q6PAN7 307 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Nmur2Q8BZ39 395 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Hdac7Q8C2B3 938 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Lgi4Q8K1S1 537 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Plcl2Q8K394 1128 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Dedd2Q8QZV0 330 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Irf2bp1Q8R3Y8 584 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Smyd2Q8R5A0 433 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Olfr615Q8VGY4 313 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Laptm4bQ91XQ6 227 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Syf2Q9D198 242 aaKnown RBP18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Pkmyt1Q9ESG9 490 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Mnx1Q9QZW9 404 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Usp18Q9WTV6 368 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Notch4P31695 1964 aa18.3■□□□□ 0.52
Vti1b-201ENSMUST00000055262 A0A286YDP4 300 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Serpinb5P70124 375 aaKnown RBP18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Smad1P70340 465 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Pfdn6Q03958 127 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 StimateQ3UF25 288 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Exoc3l4Q6DIA2 721 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Acat3Q80X81 397 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Znf770Q8BIQ8 705 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Pabpc5Q8C7D3 381 aaKnown RBP18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 SuoxQ8R086 546 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Nipal2Q91WC7 383 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Pcdha6Q91Y14 946 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Pcdha5Q91Y15 934 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Smc6Q924W5 1097 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Clcc1Q99LI2 539 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Q9CQM1 111 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Lrrc40Q9CRC8 602 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Ndst3Q9EQH7 873 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Gtf3c1Q8K284 2101 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Atg2bQ80XK6 2075 aa18.29■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Dmxl1Q6PNC0 3013 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Gm29554A0A087WNW4 188 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Vmn1r76F8VQ63 324 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Gap43P06837 227 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 MdkP12025 140 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 CtsdP18242 410 aaKnown RBP18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Pou5f1P20263 352 aaKnown RBP18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Sstr4P49660 385 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Fam98aQ3TJZ6 515 aaKnown RBP18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Nxph1Q61200 271 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Zfp91Q62511 572 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Sf1Q64213 653 aaKnown RBP18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Brsk2Q69Z98 735 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Fastkd1Q6DI86 829 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Rab7bQ8VEA8 199 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Atad3Q925I1 591 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Edem1Q925U4 652 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Wdr73Q9CWR1 371 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Commd8Q9CZG3 183 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Lcn9Q9D267 178 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Prl8a6Q9DAY2 240 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Dgat2Q9DCV3 388 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Dock6Q8VDR9 2080 aa18.28■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Tnfrsf14A0A1W2P7D5 276 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Grin3aA2AIR5 1135 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 4930455H04RikD3Z622 58 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Zfp871G5E905 615 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Scamp3O35609 349 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Mtnd3P03899 115 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Mmp13P33435 472 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Ly6fP35460 134 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Ldb1P70662 411 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Dab2P98078 766 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Hoxc4Q08624 264 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Lingo4Q149C3 593 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Garem1Q3UFT3 876 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Skap2Q3UND0 358 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Otol1Q4ZJM7 482 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Fam160a1Q505K2 1081 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Mc2rQ64326 296 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Ubfd1Q78JW9 368 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Rtp2Q80ZI2 223 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Klhl38Q8BSF5 581 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Zfp398Q8BV16 643 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Dcun1d2Q8BZJ7 259 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Npsr1Q8BZP8 371 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Clptm1Q8VBZ3 664 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Tbrg4Q91YM4 630 aaKnown RBP18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Ilf2Q9CXY6 390 aaKnown RBP18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Creb3l4Q9D2A5 370 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Phf6Q9D4J7 364 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Slc25a14Q9Z2B2 325 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 RgrQ9Z2B3 291 aa18.27■□□□□ 0.52
Vti1b-201ENSMUST00000055262 Gm3409A0A0G2JE67 319 aa18.26■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms