RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Srek1ip1Q4V9W2 153 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 ProcrQ64695 242 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Brsk2Q69Z98 735 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Trim17Q7TPM3 477 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Olfr664Q7TRP5 306 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 H2-M10.2Q85ZW9 329 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Tmem72Q8C3K5 275 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Mettl3Q8C3P7 580 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 IlkapQ8R0F6 392 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Pou5f2Q9DAC9 329 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Abcb9Q9JJ59 762 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Sh2d3cQ9QZS8 854 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Insl5Q9WUG6 135 aa11.95□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Fndc3c1Q6DFV6 1356 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Pkd2l1A2A259 760 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 BC049352E9Q2Z6 85 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Zfp277E9Q6D6 583 aaKnown RBP11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Itgb1P09055 798 aaKnown RBP11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Upp1P52624 311 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Kpnb1P70168 876 aaKnown RBP11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Trafd1Q3UDK1 580 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Cxcl17Q5UW37 119 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 HrQ61645 1182 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Rab3ipQ68EF0 428 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Awat2Q6E1M8 333 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Olfr1313Q7TQW8 311 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 C2cd2lQ80X80 706 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 FicdQ8BIX9 458 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Mapkap1Q8BKH7 522 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Rell1Q8K2J7 272 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Olfr606Q8VGZ8 319 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Dtnbp1Q91WZ8 352 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Pcdhb4Q91XZ6 784 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Gins4Q99LZ3 223 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Cops7aQ9CZ04 275 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Cfap44E9Q5M6 1843 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Tgm7A2ART8 616 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Gm14459A2BI73 179 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 DgkdE9PUQ8 1220 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 F830016B08RikG3UWE2 416 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Gm5814J3QP80 125 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Olfr319L7MTY4 306 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Pim3P58750 326 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Myadml2Q08AU7 307 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Cyp2r1Q6VVW9 501 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Prpf38bQ80SY5 542 aaKnown RBP11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Crls1Q80ZM8 303 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Ap5m1Q8BJ63 490 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Ptk7Q8BKG3 1062 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Gk5Q8BX05 534 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Arhgap25Q8BYW1 648 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Ugt2b1Q8R084 529 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Scd3Q99PL7 359 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Glod4Q9CPV4 298 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Q9CQF4 240 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Stx11Q9D3G5 287 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Rrp8Q9DB85 457 aaKnown RBP11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Jph3Q9ET77 744 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Dlc1Q9R0Z9 1092 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Ankrd31A0A140LI88 1765 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Gm31371A0A1D5RM70 265 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Vmn2r84D3YWE3 849 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Zbtb11G5E8B9 1050 aaKnown RBP11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Vmn2r21K7N6Y7 853 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Vmn2r20L7N2B1 853 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Sult3a1O35403 293 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Ptch2O35595 1182 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Msh2P43247 935 aaKnown RBP11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Flt3Q00342 1000 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Sgo2Q7TSY8 1164 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Clec2eQ80XD9 204 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Zfp263Q8CF60 680 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Snx8Q8CFD4 459 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Pcdhb16Q91Y03 802 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Cyp4f3Q99N16 524 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Mrpl46Q9EQI8 283 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 EefsecQ9JHW4 583 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Sars2Q9JJL8 518 aa11.94□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Rpl7a-ps3A0A140T8L1 270 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Sh3pxd2bA2AAY5 908 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Tubb1A2AQ07 451 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 EXOC1LB9EK06 172 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Ifrd1P19182 449 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Bmp2P21274 394 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Tbc1d10aP58802 500 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Hrh2P97292 397 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Krt76Q3UV17 594 aaKnown RBP11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Clec4a4Q5YIR8 236 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Q6P1I3 445 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Deup1Q7M6Y5 601 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Atl1Q8BH66 558 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 SynpoQ8CC35 929 aaKnown RBP11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Slc29a4Q8R139 528 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Tmbim4Q9DA39 238 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Gtf2h2Q9JIB4 396 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Extl1Q9JKV7 669 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 IL36RNQ9QYY1 156 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Map7d3A2AEY4 876 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 Tex13aA2AFS9 377 aa11.93□□□□□ -0.5
Ctr9-201ENSMUST00000005749 TriqkB2B9E1 86 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms