RNA–Protein interactions for RNA: ENST00000641715.1

SAMMSON-221, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-221ENST00000641715 NSD2O96028 1365 aa16.16■□□□□ 0.18
SAMMSON-221ENST00000641715 DDX54Q8TDD1 881 aaKnown RBP16.16■□□□□ 0.18
SAMMSON-221ENST00000641715 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
SAMMSON-221ENST00000641715 NUP188Q5SRE5 1749 aa16.15■□□□□ 0.18
SAMMSON-221ENST00000641715 R3HDM1Q15032 1099 aaKnown RBP16.14■□□□□ 0.18
SAMMSON-221ENST00000641715 ZCRB1Q8TBF4 217 aaKnown RBP16.14■□□□□ 0.18
SAMMSON-221ENST00000641715 RGPD3A6NKT7 1758 aaPredicted RBP16.14■□□□□ 0.17
SAMMSON-221ENST00000641715 RGPD4Q7Z3J3 1758 aa16.14■□□□□ 0.17
SAMMSON-221ENST00000641715 SHANK3Q9BYB0 1731 aa16.14■□□□□ 0.17
SAMMSON-221ENST00000641715 NHSQ6T4R5 1651 aa16.14■□□□□ 0.17
SAMMSON-221ENST00000641715 AMER1Q5JTC6 1135 aaPredicted RBP16.14■□□□□ 0.17
SAMMSON-221ENST00000641715 MORC1Q86VD1 984 aa16.14■□□□□ 0.17
SAMMSON-221ENST00000641715 RAPGEF4Q8WZA2 1011 aa16.14■□□□□ 0.17
SAMMSON-221ENST00000641715 PER1O15534 1290 aaPredicted RBP16.13■□□□□ 0.17
SAMMSON-221ENST00000641715 PROM2Q8N271 834 aa16.13■□□□□ 0.17
SAMMSON-221ENST00000641715 TATP17735 454 aaPredicted RBP16.12■□□□□ 0.17
SAMMSON-221ENST00000641715 EYA1Q99502 592 aa16.11■□□□□ 0.17
SAMMSON-221ENST00000641715 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
SAMMSON-221ENST00000641715 BTAF1O14981 1849 aa16.1■□□□□ 0.17
SAMMSON-221ENST00000641715 EIF4A2Q14240 407 aaKnown RBP16.1■□□□□ 0.17
SAMMSON-221ENST00000641715 NBPF14Q5TI25 921 aa16.09■□□□□ 0.17
SAMMSON-221ENST00000641715 TXNRD1Q16881 649 aa16.09■□□□□ 0.17
SAMMSON-221ENST00000641715 DOT1LQ8TEK3 1739 aa16.07■□□□□ 0.16
SAMMSON-221ENST00000641715 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
SAMMSON-221ENST00000641715 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
SAMMSON-221ENST00000641715 PCDH11XQ9BZA7 1347 aa16.07■□□□□ 0.16
SAMMSON-221ENST00000641715 PCDH11YQ9BZA8 1340 aa16.07■□□□□ 0.16
SAMMSON-221ENST00000641715 CYP27B1O15528 508 aa16.06■□□□□ 0.16
SAMMSON-221ENST00000641715 CC2D1BQ5T0F9 858 aaKnown RBP16.06■□□□□ 0.16
SAMMSON-221ENST00000641715 PKD1L3Q7Z443 1732 aa16.06■□□□□ 0.16
SAMMSON-221ENST00000641715 ANO8Q9HCE9 1232 aaPredicted RBP16.06■□□□□ 0.16
SAMMSON-221ENST00000641715 IGSF1Q8N6C5 1336 aa16.05■□□□□ 0.16
SAMMSON-221ENST00000641715 LRP5O75197 1615 aa16.04■□□□□ 0.16
SAMMSON-221ENST00000641715 SPG7Q9UQ90 795 aa16.03■□□□□ 0.16
SAMMSON-221ENST00000641715 MTHFSP49914 203 aa16.02■□□□□ 0.15
SAMMSON-221ENST00000641715 CNGB1Q14028 1251 aaPredicted RBP16.02■□□□□ 0.15
SAMMSON-221ENST00000641715 LRRC4BQ9NT99 713 aa16.02■□□□□ 0.15
SAMMSON-221ENST00000641715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.02■□□□□ 0.15
SAMMSON-221ENST00000641715 NPC1L1Q9UHC9 1359 aa16.02■□□□□ 0.15
SAMMSON-221ENST00000641715 IL13P35225 146 aa16■□□□□ 0.15
SAMMSON-221ENST00000641715 TOGARAM1Q9Y4F4 1720 aa16■□□□□ 0.15
SAMMSON-221ENST00000641715 NKX1-1Q15270 411 aaPredicted RBP15.99■□□□□ 0.15
SAMMSON-221ENST00000641715 SLC15A2Q16348 729 aa15.99■□□□□ 0.15
SAMMSON-221ENST00000641715 AEBP1Q8IUX7 1158 aa15.99■□□□□ 0.15
SAMMSON-221ENST00000641715 PDGFDQ9GZP0 370 aaPredicted RBP15.99■□□□□ 0.15
SAMMSON-221ENST00000641715 STK32BQ9NY57 414 aa15.99■□□□□ 0.15
SAMMSON-221ENST00000641715 ITGB4P16144 1822 aa15.99■□□□□ 0.15
SAMMSON-221ENST00000641715 LY75O60449 1722 aa15.99■□□□□ 0.15
SAMMSON-221ENST00000641715 PAPPAQ13219 1627 aa15.99■□□□□ 0.15
SAMMSON-221ENST00000641715 KCNQ4P56696 695 aa15.99■□□□□ 0.15
SAMMSON-221ENST00000641715 PLEKHG2Q9H7P9 1386 aa15.98■□□□□ 0.15
SAMMSON-221ENST00000641715 PHKG2P15735 406 aa15.98■□□□□ 0.15
SAMMSON-221ENST00000641715 SLC27A3Q5K4L6 730 aa15.98■□□□□ 0.15
SAMMSON-221ENST00000641715 MPRIPQ6WCQ1 1025 aa15.98■□□□□ 0.15
SAMMSON-221ENST00000641715 SULT6B1Q6IMI4 303 aa15.97■□□□□ 0.15
SAMMSON-221ENST00000641715 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
SAMMSON-221ENST00000641715 IFNL2Q8IZJ0 200 aa15.97■□□□□ 0.15
SAMMSON-221ENST00000641715 CASZ1Q86V15 1759 aa15.97■□□□□ 0.15
SAMMSON-221ENST00000641715 ZNF827Q17R98 1081 aa15.96■□□□□ 0.15
SAMMSON-221ENST00000641715 KDRP35968 1356 aa15.95■□□□□ 0.14
SAMMSON-221ENST00000641715 PLEKHO1Q53GL0 409 aaPredicted RBP15.95■□□□□ 0.14
SAMMSON-221ENST00000641715 PIGBQ92521 554 aa15.95■□□□□ 0.14
SAMMSON-221ENST00000641715 SPON1Q9HCB6 807 aa15.94■□□□□ 0.14
SAMMSON-221ENST00000641715 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
SAMMSON-221ENST00000641715 AMOTQ4VCS5 1084 aa15.94■□□□□ 0.14
SAMMSON-221ENST00000641715 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
SAMMSON-221ENST00000641715 CCNL1Q9UK58 526 aaPredicted RBP15.94■□□□□ 0.14
SAMMSON-221ENST00000641715 DIAPH1O60610 1272 aaKnown RBP15.93■□□□□ 0.14
SAMMSON-221ENST00000641715 ZNF530Q6P9A1 599 aaPredicted RBP15.93■□□□□ 0.14
SAMMSON-221ENST00000641715 PALLDQ8WX93 1383 aa15.92■□□□□ 0.14
SAMMSON-221ENST00000641715 ZBTB7AO95365 584 aa15.92■□□□□ 0.14
SAMMSON-221ENST00000641715 HMOX1P09601 288 aa15.92■□□□□ 0.14
SAMMSON-221ENST00000641715 TMOD3Q9NYL9 352 aa15.92■□□□□ 0.14
SAMMSON-221ENST00000641715 COL3A1P02461 1466 aaPredicted RBP15.91■□□□□ 0.14
SAMMSON-221ENST00000641715 DCAF5Q96JK2 942 aa15.91■□□□□ 0.14
SAMMSON-221ENST00000641715 SMARCC1Q92922 1105 aaPredicted RBP15.9■□□□□ 0.14
SAMMSON-221ENST00000641715 HSP90AB1P08238 724 aaKnown RBP15.89■□□□□ 0.13
SAMMSON-221ENST00000641715 TFCP2L1Q9NZI6 479 aa15.89■□□□□ 0.13
SAMMSON-221ENST00000641715 ASAP1Q9ULH1 1129 aa15.89■□□□□ 0.13
SAMMSON-221ENST00000641715 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
SAMMSON-221ENST00000641715 TUBGCP6Q96RT7 1819 aa15.89■□□□□ 0.13
SAMMSON-221ENST00000641715 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
SAMMSON-221ENST00000641715 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
SAMMSON-221ENST00000641715 ERVV-2B6SEH9 535 aa15.89■□□□□ 0.13
SAMMSON-221ENST00000641715 C1orf141Q5JVX7 400 aa15.89■□□□□ 0.13
SAMMSON-221ENST00000641715 QSER1Q2KHR3 1735 aa15.88■□□□□ 0.13
SAMMSON-221ENST00000641715 PNPLA7Q6ZV29 1317 aa15.88■□□□□ 0.13
SAMMSON-221ENST00000641715 C5P01031 1676 aa15.88■□□□□ 0.13
SAMMSON-221ENST00000641715 PPP2R1AP30153 589 aa15.88■□□□□ 0.13
SAMMSON-221ENST00000641715 PTGER2P43116 358 aa15.88■□□□□ 0.13
SAMMSON-221ENST00000641715 U2SURPO15042 1029 aaKnown RBP15.87■□□□□ 0.13
SAMMSON-221ENST00000641715 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
SAMMSON-221ENST00000641715 ATG3Q9NT62 314 aa15.87■□□□□ 0.13
SAMMSON-221ENST00000641715 PPP1R1BQ9UD71 204 aaPredicted RBP15.87■□□□□ 0.13
SAMMSON-221ENST00000641715 LOC102724428A0A0B4J2F2 783 aa15.85■□□□□ 0.13
SAMMSON-221ENST00000641715 SIK1P57059 783 aa15.85■□□□□ 0.13
SAMMSON-221ENST00000641715 CABP4P57796 275 aa15.85■□□□□ 0.13
SAMMSON-221ENST00000641715 MTHFSDQ2M296 383 aaKnown RBP15.84■□□□□ 0.13
SAMMSON-221ENST00000641715 AKAP4Q5JQC9 854 aa15.84■□□□□ 0.13
SAMMSON-221ENST00000641715 CFAP53Q96M91 514 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms