RNA–Protein interactions for RNA: ENST00000641539.1

C19orf48-215, Transcript of chromosome 19 open reading frame 48, humanhuman

Gene C19orf48, Length 717 nt, Biotype transcribed unitary pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-215ENST00000641539 MSL1Q68DK7 614 aa17■□□□□ 0.31
C19orf48-215ENST00000641539 ZNF526Q8TF50 670 aaPredicted RBP16.99■□□□□ 0.31
C19orf48-215ENST00000641539 LTV1Q96GA3 475 aaPredicted RBP16.99■□□□□ 0.31
C19orf48-215ENST00000641539 FAM208AQ9UK61 1670 aaKnown RBP16.99■□□□□ 0.31
C19orf48-215ENST00000641539 ROCK2O75116 1388 aaKnown RBP16.99■□□□□ 0.31
C19orf48-215ENST00000641539 NSD2O96028 1365 aa16.99■□□□□ 0.31
C19orf48-215ENST00000641539 SBNO2Q9Y2G9 1366 aa16.99■□□□□ 0.31
C19orf48-215ENST00000641539 L3MBTL2Q969R5 705 aa16.98■□□□□ 0.31
C19orf48-215ENST00000641539 CD2APQ9Y5K6 639 aa16.98■□□□□ 0.31
C19orf48-215ENST00000641539 ADCY9O60503 1353 aa16.98■□□□□ 0.31
C19orf48-215ENST00000641539 IP6K1Q92551 441 aa16.97■□□□□ 0.31
C19orf48-215ENST00000641539 CD163L1Q9NR16 1453 aa16.97■□□□□ 0.31
C19orf48-215ENST00000641539 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
C19orf48-215ENST00000641539 TMC1Q8TDI8 760 aa16.96■□□□□ 0.31
C19orf48-215ENST00000641539 USP47Q96K76 1375 aa16.96■□□□□ 0.31
C19orf48-215ENST00000641539 ZCRB1Q8TBF4 217 aaKnown RBP16.95■□□□□ 0.3
C19orf48-215ENST00000641539 EDC4Q6P2E9 1401 aaKnown RBP16.94■□□□□ 0.3
C19orf48-215ENST00000641539 C5P01031 1676 aa16.93■□□□□ 0.3
C19orf48-215ENST00000641539 FLAD1Q8NFF5 587 aa16.92■□□□□ 0.3
C19orf48-215ENST00000641539 SLC12A5Q9H2X9 1139 aa16.92■□□□□ 0.3
C19orf48-215ENST00000641539 MEGF6O75095 1541 aa16.91■□□□□ 0.3
C19orf48-215ENST00000641539 RGPD2P0DJD1 1756 aa16.9■□□□□ 0.3
C19orf48-215ENST00000641539 HMGB2P26583 209 aaKnown RBP16.9■□□□□ 0.3
C19orf48-215ENST00000641539 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
C19orf48-215ENST00000641539 HOXC9P31274 260 aa16.89■□□□□ 0.29
C19orf48-215ENST00000641539 WWC3Q9ULE0 1092 aa16.89■□□□□ 0.29
C19orf48-215ENST00000641539 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.29
C19orf48-215ENST00000641539 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
C19orf48-215ENST00000641539 KIF3CO14782 793 aa16.88■□□□□ 0.29
C19orf48-215ENST00000641539 AMPHP49418 695 aa16.88■□□□□ 0.29
C19orf48-215ENST00000641539 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
C19orf48-215ENST00000641539 MAP3K19Q56UN5 1328 aa16.88■□□□□ 0.29
C19orf48-215ENST00000641539 APLP1P51693 650 aa16.87■□□□□ 0.29
C19orf48-215ENST00000641539 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
C19orf48-215ENST00000641539 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
C19orf48-215ENST00000641539 COG3Q96JB2 828 aa16.85■□□□□ 0.29
C19orf48-215ENST00000641539 AK7Q96M32 723 aa16.85■□□□□ 0.29
C19orf48-215ENST00000641539 FBLN1P23142 703 aa16.84■□□□□ 0.29
C19orf48-215ENST00000641539 RAPGEF4Q8WZA2 1011 aa16.84■□□□□ 0.29
C19orf48-215ENST00000641539 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
C19orf48-215ENST00000641539 C4BP0C0L5 1744 aa16.84■□□□□ 0.29
C19orf48-215ENST00000641539 PHF14O94880 888 aa16.83■□□□□ 0.28
C19orf48-215ENST00000641539 NBPF6Q5VWK0 638 aa16.83■□□□□ 0.28
C19orf48-215ENST00000641539 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
C19orf48-215ENST00000641539 USHBP1Q8N6Y0 703 aa16.83■□□□□ 0.28
C19orf48-215ENST00000641539 NBPF4Q96M43 638 aa16.83■□□□□ 0.28
C19orf48-215ENST00000641539 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
C19orf48-215ENST00000641539 CARD11Q9BXL7 1154 aa16.82■□□□□ 0.28
C19orf48-215ENST00000641539 UBR3Q6ZT12 1888 aa16.82■□□□□ 0.28
C19orf48-215ENST00000641539 TOGARAM1Q9Y4F4 1720 aa16.82■□□□□ 0.28
C19orf48-215ENST00000641539 NSD3Q9BZ95 1437 aa16.81■□□□□ 0.28
C19orf48-215ENST00000641539 RTL1A6NKG5 1358 aa16.81■□□□□ 0.28
C19orf48-215ENST00000641539 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
C19orf48-215ENST00000641539 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
C19orf48-215ENST00000641539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.81■□□□□ 0.28
C19orf48-215ENST00000641539 TOMM70O94826 608 aa16.81■□□□□ 0.28
C19orf48-215ENST00000641539 TATP17735 454 aaPredicted RBP16.81■□□□□ 0.28
C19orf48-215ENST00000641539 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
C19orf48-215ENST00000641539 DNAJC5GQ8N7S2 189 aa16.81■□□□□ 0.28
C19orf48-215ENST00000641539 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
C19orf48-215ENST00000641539 CICQ96RK0 1608 aaPredicted RBP16.8■□□□□ 0.28
C19orf48-215ENST00000641539 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
C19orf48-215ENST00000641539 RRS1Q15050 365 aaKnown RBP16.79■□□□□ 0.28
C19orf48-215ENST00000641539 SMIM5Q71RC9 77 aa16.79■□□□□ 0.28
C19orf48-215ENST00000641539 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
C19orf48-215ENST00000641539 ITGB4P16144 1822 aa16.78■□□□□ 0.28
C19orf48-215ENST00000641539 SSFA2P28290 1259 aa16.78■□□□□ 0.28
C19orf48-215ENST00000641539 CYP27B1O15528 508 aa16.75■□□□□ 0.27
C19orf48-215ENST00000641539 WDR90Q96KV7 1748 aa16.74■□□□□ 0.27
C19orf48-215ENST00000641539 LINC00116Q8NCU8 138 aa16.74■□□□□ 0.27
C19orf48-215ENST00000641539 PIGBQ92521 554 aa16.74■□□□□ 0.27
C19orf48-215ENST00000641539 NMRK2Q9NPI5 230 aa16.74■□□□□ 0.27
C19orf48-215ENST00000641539 BCS1LQ9Y276 419 aa16.74■□□□□ 0.27
C19orf48-215ENST00000641539 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
C19orf48-215ENST00000641539 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
C19orf48-215ENST00000641539 LOC102724428A0A0B4J2F2 783 aa16.73■□□□□ 0.27
C19orf48-215ENST00000641539 GNPATO15228 680 aa16.73■□□□□ 0.27
C19orf48-215ENST00000641539 MMP10P09238 476 aa16.73■□□□□ 0.27
C19orf48-215ENST00000641539 SIK1P57059 783 aa16.73■□□□□ 0.27
C19orf48-215ENST00000641539 N4BP2Q86UW6 1770 aaPredicted RBP16.73■□□□□ 0.27
C19orf48-215ENST00000641539 MAP2P11137 1827 aaKnown RBP16.73■□□□□ 0.27
C19orf48-215ENST00000641539 COL13A1Q5TAT6 717 aaPredicted RBP16.72■□□□□ 0.27
C19orf48-215ENST00000641539 ARHGAP27Q6ZUM4 889 aa16.72■□□□□ 0.27
C19orf48-215ENST00000641539 PCGF6Q9BYE7 350 aa16.72■□□□□ 0.27
C19orf48-215ENST00000641539 INSRP06213 1382 aa16.72■□□□□ 0.27
C19orf48-215ENST00000641539 TGFB2P61812 414 aa16.71■□□□□ 0.27
C19orf48-215ENST00000641539 HSP90AB2PQ58FF8 381 aa16.71■□□□□ 0.27
C19orf48-215ENST00000641539 C16orf71Q8IYS4 520 aaPredicted RBP16.71■□□□□ 0.27
C19orf48-215ENST00000641539 RBM46Q8TBY0 533 aaKnown RBP16.71■□□□□ 0.27
C19orf48-215ENST00000641539 KLRG1Q96E93 195 aa16.71■□□□□ 0.27
C19orf48-215ENST00000641539 GGNBP2Q9H3C7 697 aa16.71■□□□□ 0.27
C19orf48-215ENST00000641539 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
C19orf48-215ENST00000641539 A0A0G2JLW4 131 aa16.7■□□□□ 0.26
C19orf48-215ENST00000641539 FYB1O15117 783 aa16.7■□□□□ 0.26
C19orf48-215ENST00000641539 CAPN15O75808 1086 aa16.7■□□□□ 0.26
C19orf48-215ENST00000641539 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
C19orf48-215ENST00000641539 FLT4P35916 1363 aa16.69■□□□□ 0.26
C19orf48-215ENST00000641539 HTRA3P83110 453 aa16.69■□□□□ 0.26
C19orf48-215ENST00000641539 ATP6V1AP38606 617 aa16.68■□□□□ 0.26
C19orf48-215ENST00000641539 ITPK1Q13572 414 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms