RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 CCDC172P0C7W6 258 aa9.71□□□□□ -0.85
NECAP1-227ENST00000640648 EIF5P55010 431 aaKnown RBP9.71□□□□□ -0.85
NECAP1-227ENST00000640648 MAPKBP1O60336 1514 aa9.71□□□□□ -0.85
NECAP1-227ENST00000640648 USP25Q9UHP3 1055 aa9.71□□□□□ -0.86
NECAP1-227ENST00000640648 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.86
NECAP1-227ENST00000640648 CASQ1P31415 396 aa9.71□□□□□ -0.86
NECAP1-227ENST00000640648 MPNDQ8N594 471 aa9.71□□□□□ -0.86
NECAP1-227ENST00000640648 ERO1AQ96HE7 468 aa9.71□□□□□ -0.86
NECAP1-227ENST00000640648 FSD2A1L4K1 749 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 LRRCC1Q9C099 1032 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 ANKRD18AQ8IVF6 992 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 RNF168Q8IYW5 571 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-227ENST00000640648 TSPYL4Q9UJ04 414 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 TROQ12816 1431 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-227ENST00000640648 SCAPERQ9BY12 1400 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 SUPT6HQ7KZ85 1726 aaKnown RBP9.7□□□□□ -0.86
NECAP1-227ENST00000640648 TOPBP1Q92547 1522 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 NEK4P51957 841 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 TEFQ10587 303 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 TUBB2AQ13885 445 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 MVPQ14764 893 aaKnown RBP9.7□□□□□ -0.86
NECAP1-227ENST00000640648 PIBF1Q8WXW3 757 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 TUBB2BQ9BVA1 445 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 CEP83Q9Y592 693 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 SATB1Q01826 763 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 ZKSCAN8Q15776 578 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-227ENST00000640648 CCDC73Q6ZRK6 1079 aa9.7□□□□□ -0.86
NECAP1-227ENST00000640648 SPATS2LQ9NUQ6 558 aaKnown RBP9.7□□□□□ -0.86
NECAP1-227ENST00000640648 C9orf78Q9NZ63 289 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-227ENST00000640648 ICE2Q659A1 982 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 NCAPGQ9BPX3 1015 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 RSPH14Q9UHP6 348 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 ARHGAP5Q13017 1502 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 SLU7O95391 586 aaKnown RBP9.69□□□□□ -0.86
NECAP1-227ENST00000640648 ZNF445P59923 1031 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 ATF7IPQ6VMQ6 1270 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 ZKSCAN1P17029 563 aaPredicted RBP9.69□□□□□ -0.86
NECAP1-227ENST00000640648 CEP112Q8N8E3 955 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 GCC1Q96CN9 775 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 SMC3Q9UQE7 1217 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 B4GALNT4Q76KP1 1039 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 SMARCE1Q969G3 411 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 TBC1D32Q96NH3 1257 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 GRIN2BQ13224 1484 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 SH2D4BQ5SQS7 431 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 SEPT14Q6ZU15 432 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 ARFGAP3Q9NP61 516 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 TOMM22Q9NS69 142 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 EID1Q9Y6B2 187 aa9.69□□□□□ -0.86
NECAP1-227ENST00000640648 EPRSP07814 1512 aaKnown RBP9.68□□□□□ -0.86
NECAP1-227ENST00000640648 PIP4K2AP48426 406 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-227ENST00000640648 BICD2Q8TD16 824 aa9.68□□□□□ -0.86
NECAP1-227ENST00000640648 RUFY2Q8WXA3 655 aa9.68□□□□□ -0.86
NECAP1-227ENST00000640648 SPDYE4A6NLX3 237 aa9.68□□□□□ -0.86
NECAP1-227ENST00000640648 EBAG9O00559 213 aa9.68□□□□□ -0.86
NECAP1-227ENST00000640648 TWISTNBQ3B726 338 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-227ENST00000640648 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
NECAP1-227ENST00000640648 FOSBP53539 338 aa9.68□□□□□ -0.86
NECAP1-227ENST00000640648 LRRFIP2Q9Y608 721 aaKnown RBP9.68□□□□□ -0.86
NECAP1-227ENST00000640648 PPFIA3O75145 1194 aa9.68□□□□□ -0.86
NECAP1-227ENST00000640648 IFIT2P09913 472 aaKnown RBP9.68□□□□□ -0.86
NECAP1-227ENST00000640648 NBPF11Q86T75 865 aa9.68□□□□□ -0.86
NECAP1-227ENST00000640648 CCDC83Q8IWF9 413 aa9.68□□□□□ -0.86
NECAP1-227ENST00000640648 CRACR2AQ9BSW2 395 aa9.68□□□□□ -0.86
NECAP1-227ENST00000640648 CCDC27Q2M243 656 aa9.67□□□□□ -0.86
NECAP1-227ENST00000640648 CTCFLQ8NI51 663 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-227ENST00000640648 GOLGA5Q8TBA6 731 aa9.67□□□□□ -0.86
NECAP1-227ENST00000640648 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
NECAP1-227ENST00000640648 CEP135Q66GS9 1140 aa9.67□□□□□ -0.86
NECAP1-227ENST00000640648 VGLL3A8MV65 326 aa9.67□□□□□ -0.86
NECAP1-227ENST00000640648 CTAGE5O15320 804 aa9.67□□□□□ -0.86
NECAP1-227ENST00000640648 AEBP2Q6ZN18 517 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-227ENST00000640648 TNPO1Q92973 898 aaKnown RBP9.67□□□□□ -0.86
NECAP1-227ENST00000640648 NUCKS1Q9H1E3 243 aaKnown RBP9.67□□□□□ -0.86
NECAP1-227ENST00000640648 LMAN1P49257 510 aa9.67□□□□□ -0.86
NECAP1-227ENST00000640648 WDR63Q8IWG1 891 aa9.67□□□□□ -0.86
NECAP1-227ENST00000640648 TRHP20396 242 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-227ENST00000640648 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 ABCC5O15440 1437 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 ARHGAP25P42331 645 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 DUSP27Q5VZP5 1158 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 PTPN23Q9H3S7 1636 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 IRX1P78414 480 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-227ENST00000640648 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-227ENST00000640648 CNPY4Q8N129 248 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 CCDC150Q8NCX0 1101 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 SMARCC1Q92922 1105 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-227ENST00000640648 PTPRKQ15262 1439 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 NUTM2GQ5VZR2 741 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 SMC5Q8IY18 1101 aa9.66□□□□□ -0.86
NECAP1-227ENST00000640648 HECW1Q76N89 1606 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 CHD1LQ86WJ1 897 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 C10orf67Q8IYJ2 551 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 TMEM57Q8N5G2 664 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 ZNF526Q8TF50 670 aaPredicted RBP9.65□□□□□ -0.86
NECAP1-227ENST00000640648 CCDC102AQ96A19 550 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 PRAM1Q96QH2 718 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 INSRP06213 1382 aa9.65□□□□□ -0.86
NECAP1-227ENST00000640648 HSPA4P34932 840 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms