RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 CAVIN4Q5BKX8 364 aa11.19□□□□□ -0.62
CACNA1D-230ENST00000640483 TSR2Q969E8 191 aaKnown RBP11.19□□□□□ -0.62
CACNA1D-230ENST00000640483 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
CACNA1D-230ENST00000640483 VPS37CA5D8V6 355 aaPredicted RBP11.19□□□□□ -0.62
CACNA1D-230ENST00000640483 BICD2Q8TD16 824 aa11.19□□□□□ -0.62
CACNA1D-230ENST00000640483 BIN2Q9UBW5 565 aaPredicted RBP11.19□□□□□ -0.62
CACNA1D-230ENST00000640483 FANCIQ9NVI1 1328 aa11.18□□□□□ -0.62
CACNA1D-230ENST00000640483 CDK5RAP3Q96JB5 506 aa11.18□□□□□ -0.62
CACNA1D-230ENST00000640483 LRP2BPQ9P2M1 347 aa11.18□□□□□ -0.62
CACNA1D-230ENST00000640483 RFC4P35249 363 aa11.18□□□□□ -0.62
CACNA1D-230ENST00000640483 IFNL2Q8IZJ0 200 aa11.18□□□□□ -0.62
CACNA1D-230ENST00000640483 IPO7O95373 1038 aaKnown RBP11.18□□□□□ -0.62
CACNA1D-230ENST00000640483 ADGRF5Q8IZF2 1346 aa11.17□□□□□ -0.62
CACNA1D-230ENST00000640483 FKBP4Q02790 459 aaKnown RBP eCLIP11.17□□□□□ -0.62
CACNA1D-230ENST00000640483 TAF7Q15545 349 aaPredicted RBP11.17□□□□□ -0.62
CACNA1D-230ENST00000640483 WDR78Q5VTH9 848 aa11.17□□□□□ -0.62
CACNA1D-230ENST00000640483 LARP1Q6PKG0 1096 aaKnown RBP11.17□□□□□ -0.62
CACNA1D-230ENST00000640483 ZNF428Q96B54 188 aa11.17□□□□□ -0.62
CACNA1D-230ENST00000640483 FMNL2Q96PY5 1086 aa11.17□□□□□ -0.62
CACNA1D-230ENST00000640483 A2MP01023 1474 aa11.17□□□□□ -0.62
CACNA1D-230ENST00000640483 GCC1Q96CN9 775 aa11.17□□□□□ -0.62
CACNA1D-230ENST00000640483 LRRCC1Q9C099 1032 aa11.17□□□□□ -0.62
CACNA1D-230ENST00000640483 TTC21BQ7Z4L5 1316 aa11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 GOLGA6L3A6NEY3 463 aa11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 HSPA2P54652 639 aa11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 METTL24Q5JXM2 366 aa11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 AKAP2Q9Y2D5 859 aa11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 ST5P78524 1137 aa11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 IFIT1P09914 478 aaKnown RBP11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 LMOD1P29536 600 aaPredicted RBP11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 CFAP43Q8NDM7 1665 aa11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 CA8P35219 290 aa11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 TRMT112Q9UI30 125 aaKnown RBP11.16□□□□□ -0.62
CACNA1D-230ENST00000640483 CCDC73Q6ZRK6 1079 aa11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 ANKRD24Q8TF21 1146 aa11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 CCDC85AQ96PX6 553 aaPredicted RBP11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 ZNF287Q9HBT7 754 aa11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 ZNF219Q9P2Y4 722 aaPredicted RBP11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 NCKAP5LQ9HCH0 1330 aa11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 CCDC69A6NI79 296 aa11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 EPS15P42566 896 aa11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 TDO2P48775 406 aa11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 CT47A1Q5JQC4 288 aaPredicted RBP11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 AACSQ86V21 672 aa11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 SLF2Q8IX21 1173 aa11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 VTI1AQ96AJ9 217 aa11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.15□□□□□ -0.62
CACNA1D-230ENST00000640483 NAIPQ13075 1403 aa11.15□□□□□ -0.63
CACNA1D-230ENST00000640483 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.15□□□□□ -0.63
CACNA1D-230ENST00000640483 CHRNA2Q15822 529 aa11.15□□□□□ -0.63
CACNA1D-230ENST00000640483 SKOR2Q2VWA4 1001 aaPredicted RBP11.15□□□□□ -0.63
CACNA1D-230ENST00000640483 CRACR2BQ8N4Y2 399 aaPredicted RBP11.15□□□□□ -0.63
CACNA1D-230ENST00000640483 SRGAP3O43295 1099 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 KDM4AO75164 1064 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 LRRC59Q96AG4 307 aaKnown RBP11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 C1orf115Q9H7X2 142 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 C14orf93Q9H972 538 aaKnown RBP11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 RIMS2Q9UQ26 1411 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 TXLNAP40222 546 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 CHMP4BP1P59074 171 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 IPO9Q96P70 1041 aaKnown RBP11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 UHRF1BP1Q6BDS2 1440 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 ACEP12821 1306 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 PDE4AP27815 886 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 ZNF622Q969S3 477 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 SCLT1Q96NL6 688 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 MYD88Q99836 296 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 DDX49Q9Y6V7 483 aaKnown RBP11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 KRT18P05783 430 aaKnown RBP11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 SMARCC1Q92922 1105 aaPredicted RBP11.14□□□□□ -0.63
CACNA1D-230ENST00000640483 C19orf44Q9H6X5 657 aa11.13□□□□□ -0.63
CACNA1D-230ENST00000640483 MCM10Q7L590 875 aa11.13□□□□□ -0.63
CACNA1D-230ENST00000640483 TRIM22Q8IYM9 498 aa11.13□□□□□ -0.63
CACNA1D-230ENST00000640483 DUSP27Q5VZP5 1158 aa11.13□□□□□ -0.63
CACNA1D-230ENST00000640483 MPHOSPH6Q99547 160 aaKnown RBP11.13□□□□□ -0.63
CACNA1D-230ENST00000640483 PPP1R42Q7Z4L9 355 aa11.13□□□□□ -0.63
CACNA1D-230ENST00000640483 ABCF2Q9UG63 623 aa11.13□□□□□ -0.63
CACNA1D-230ENST00000640483 CTNNA3Q9UI47 895 aa11.13□□□□□ -0.63
CACNA1D-230ENST00000640483 TTC21AQ8NDW8 1320 aa11.13□□□□□ -0.63
CACNA1D-230ENST00000640483 DUOX2Q9NRD8 1548 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 USP5P45974 858 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 IFIT5Q13325 482 aaKnown RBP11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 DDB1Q16531 1140 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 SPINK5Q9NQ38 1064 aaPredicted RBP11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 HYPKQ9NX55 129 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 DDX46Q7L014 1031 aaKnown RBP11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 DZIP1Q86YF9 867 aaKnown RBP11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 DRC1Q96MC2 740 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 SLC5A1P13866 664 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 TMPOP42166 694 aaKnown RBP11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 CCDC70Q6NSX1 233 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 AIDAQ96BJ3 306 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 UBAC1Q9BSL1 405 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 ANKRD18BA2A2Z9 1011 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 MYO1BO43795 1136 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 IDH1O75874 414 aaKnown RBP11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 GOLGA6L1Q8N7Z2 621 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms