RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 PARD3Q8TEW0 1356 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 CABP4P57796 275 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 FAM196AQ6ZSG2 479 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 DDX54Q8TDD1 881 aaKnown RBP7.11□□□□□ -1.27
RTTN-218ENST00000640408 PLEKHG2Q9H7P9 1386 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 PCDH11XQ9BZA7 1347 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 PCDH11YQ9BZA8 1340 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 IFT172Q9UG01 1749 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 HSP90B1P14625 803 aaKnown RBP7.11□□□□□ -1.27
RTTN-218ENST00000640408 SYTL4Q96C24 671 aaPredicted RBP7.11□□□□□ -1.27
RTTN-218ENST00000640408 MAP7D2Q96T17 732 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 ERBB3P21860 1342 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 RIPK4P57078 832 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 NFE2L2Q16236 605 aa7.11□□□□□ -1.27
RTTN-218ENST00000640408 IPO8O15397 1037 aaKnown RBP7.1□□□□□ -1.27
RTTN-218ENST00000640408 BAG6P46379 1132 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 ZNF428Q96B54 188 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 GOLGA6L3A6NEY3 463 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 GNAT3A8MTJ3 354 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 DCAF5Q96JK2 942 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 BABAM1Q9NWV8 329 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 QRICH2Q9H0J4 1663 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 HMOX1P09601 288 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 EIF4A2Q14240 407 aaKnown RBP7.1□□□□□ -1.27
RTTN-218ENST00000640408 TMOD3Q9NYL9 352 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 ITSN1Q15811 1721 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 KAT6BQ8WYB5 2073 aa7.1□□□□□ -1.27
RTTN-218ENST00000640408 AKAP4Q5JQC9 854 aa7.09□□□□□ -1.27
RTTN-218ENST00000640408 NBPF14Q5TI25 921 aa7.09□□□□□ -1.27
RTTN-218ENST00000640408 LTBP4Q8N2S1 1624 aa7.09□□□□□ -1.27
RTTN-218ENST00000640408 GJD4Q96KN9 370 aaPredicted RBP7.09□□□□□ -1.27
RTTN-218ENST00000640408 E9PSI1 815 aa7.09□□□□□ -1.27
RTTN-218ENST00000640408 RRP9O43818 475 aaKnown RBP7.09□□□□□ -1.27
RTTN-218ENST00000640408 FNBP4Q8N3X1 1017 aaPredicted RBP7.09□□□□□ -1.27
RTTN-218ENST00000640408 NRXN3Q9Y4C0 1643 aa7.09□□□□□ -1.27
RTTN-218ENST00000640408 MTERF4Q7Z6M4 381 aaKnown RBP7.09□□□□□ -1.27
RTTN-218ENST00000640408 BARGINQ6ZT62 677 aa7.09□□□□□ -1.28
RTTN-218ENST00000640408 EYA1Q99502 592 aa7.09□□□□□ -1.28
RTTN-218ENST00000640408 DDX58O95786 925 aaKnown RBP7.08□□□□□ -1.28
RTTN-218ENST00000640408 CT47B1P0C2W7 299 aaPredicted RBP7.08□□□□□ -1.28
RTTN-218ENST00000640408 CCDC125Q86Z20 511 aa7.08□□□□□ -1.28
RTTN-218ENST00000640408 ZRANB1Q9UGI0 708 aa7.08□□□□□ -1.28
RTTN-218ENST00000640408 APAF1O14727 1248 aa7.08□□□□□ -1.28
RTTN-218ENST00000640408 NPHP1O15259 732 aa7.08□□□□□ -1.28
RTTN-218ENST00000640408 CALRP27797 417 aaKnown RBP7.08□□□□□ -1.28
RTTN-218ENST00000640408 WDR63Q8IWG1 891 aa7.08□□□□□ -1.28
RTTN-218ENST00000640408 SOS1Q07889 1333 aaPredicted RBP7.08□□□□□ -1.28
RTTN-218ENST00000640408 ARHGEF28Q8N1W1 1705 aaKnown RBP7.08□□□□□ -1.28
RTTN-218ENST00000640408 FAM83GA6ND36 823 aa7.08□□□□□ -1.28
RTTN-218ENST00000640408 FAM43AQ8N2R8 423 aa7.08□□□□□ -1.28
RTTN-218ENST00000640408 STARD3NLO95772 234 aa7.08□□□□□ -1.28
RTTN-218ENST00000640408 KRT27Q7Z3Y8 459 aa7.08□□□□□ -1.28
RTTN-218ENST00000640408 TPM2P07951 284 aa7.07□□□□□ -1.28
RTTN-218ENST00000640408 OVOS2A0A0J9YW53 1432 aa7.07□□□□□ -1.28
RTTN-218ENST00000640408 OVOS2Q6IE36 1432 aa7.07□□□□□ -1.28
RTTN-218ENST00000640408 DCAF8L1A6NGE4 600 aa7.07□□□□□ -1.28
RTTN-218ENST00000640408 CRB1P82279 1406 aa7.07□□□□□ -1.28
RTTN-218ENST00000640408 CDK12Q9NYV4 1490 aaPredicted RBP7.07□□□□□ -1.28
RTTN-218ENST00000640408 TSPYL4Q9UJ04 414 aa7.07□□□□□ -1.28
RTTN-218ENST00000640408 TAF7Q15545 349 aaPredicted RBP7.07□□□□□ -1.28
RTTN-218ENST00000640408 FAM98CQ17RN3 349 aaKnown RBP7.07□□□□□ -1.28
RTTN-218ENST00000640408 ERVV-2B6SEH9 535 aa7.06□□□□□ -1.28
RTTN-218ENST00000640408 IL13P35225 146 aa7.06□□□□□ -1.28
RTTN-218ENST00000640408 LARP1Q6PKG0 1096 aaKnown RBP7.06□□□□□ -1.28
RTTN-218ENST00000640408 ADAMTS8Q9UP79 889 aa7.06□□□□□ -1.28
RTTN-218ENST00000640408 IGSF1Q8N6C5 1336 aa7.06□□□□□ -1.28
RTTN-218ENST00000640408 STRCQ7RTU9 1775 aa7.06□□□□□ -1.28
RTTN-218ENST00000640408 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.06□□□□□ -1.28
RTTN-218ENST00000640408 SEPT12Q8IYM1 358 aa7.06□□□□□ -1.28
RTTN-218ENST00000640408 USP32Q8NFA0 1604 aa7.06□□□□□ -1.28
RTTN-218ENST00000640408 TMPOP42166 694 aaKnown RBP7.06□□□□□ -1.28
RTTN-218ENST00000640408 FLAD1Q8NFF5 587 aa7.06□□□□□ -1.28
RTTN-218ENST00000640408 TMX4Q9H1E5 349 aaPredicted RBP7.06□□□□□ -1.28
RTTN-218ENST00000640408 IL16Q14005 1332 aa7.06□□□□□ -1.28
RTTN-218ENST00000640408 A0A087WZG4 1122 aa7.05□□□□□ -1.28
RTTN-218ENST00000640408 FMNL2Q96PY5 1086 aa7.05□□□□□ -1.28
RTTN-218ENST00000640408 OVOS2A0A0G2JMS6 1433 aa7.05□□□□□ -1.28
RTTN-218ENST00000640408 TCERG1O14776 1098 aaKnown RBP7.05□□□□□ -1.28
RTTN-218ENST00000640408 NEXNQ0ZGT2 675 aa7.05□□□□□ -1.28
RTTN-218ENST00000640408 AHDC1Q5TGY3 1603 aaPredicted RBP7.05□□□□□ -1.28
RTTN-218ENST00000640408 FMN2Q9NZ56 1722 aa7.05□□□□□ -1.28
RTTN-218ENST00000640408 CCDC27Q2M243 656 aa7.05□□□□□ -1.28
RTTN-218ENST00000640408 NBPF6Q5VWK0 638 aa7.05□□□□□ -1.28
RTTN-218ENST00000640408 NBPF4Q96M43 638 aa7.05□□□□□ -1.28
RTTN-218ENST00000640408 SSH2Q76I76 1423 aa7.05□□□□□ -1.28
RTTN-218ENST00000640408 SPATA31A5Q5VU36 1347 aa7.04□□□□□ -1.28
RTTN-218ENST00000640408 SPATA31A7Q8IWB4 1347 aa7.04□□□□□ -1.28
RTTN-218ENST00000640408 B4GALNT3Q6L9W6 998 aa7.04□□□□□ -1.28
RTTN-218ENST00000640408 CCDC146Q8IYE0 955 aa7.04□□□□□ -1.28
RTTN-218ENST00000640408 GTF2E1P29083 439 aaPredicted RBP7.04□□□□□ -1.28
RTTN-218ENST00000640408 RBM42Q9BTD8 480 aaKnown RBP7.04□□□□□ -1.28
RTTN-218ENST00000640408 SPATA31A1Q5TZJ5 1347 aa7.04□□□□□ -1.28
RTTN-218ENST00000640408 GOLGA6L6A8MZA4 724 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 CCDC30Q5VVM6 783 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 ZNF771Q7L3S4 317 aaPredicted RBP7.03□□□□□ -1.28
RTTN-218ENST00000640408 ILDR1Q86SU0 546 aaPredicted RBP7.03□□□□□ -1.28
RTTN-218ENST00000640408 ARID3AQ99856 593 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 ZNF652Q9Y2D9 606 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 BTBD11A6QL63 1104 aa7.03□□□□□ -1.28
RTTN-218ENST00000640408 HOXB7P09629 217 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms