RNA–Protein interactions for RNA: ENST00000640154.1

CGREF1-209, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 5 BASIC

Gene CGREF1, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-209ENST00000640154 USHBP1Q8N6Y0 703 aa16.64■□□□□ 0.25
CGREF1-209ENST00000640154 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.25
CGREF1-209ENST00000640154 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
CGREF1-209ENST00000640154 TNNT2P45379 298 aaPredicted RBP16.63■□□□□ 0.25
CGREF1-209ENST00000640154 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
CGREF1-209ENST00000640154 DDX54Q8TDD1 881 aaKnown RBP16.63■□□□□ 0.25
CGREF1-209ENST00000640154 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
CGREF1-209ENST00000640154 TATP17735 454 aaPredicted RBP16.62■□□□□ 0.25
CGREF1-209ENST00000640154 R3HDM1Q15032 1099 aaKnown RBP16.62■□□□□ 0.25
CGREF1-209ENST00000640154 MORC1Q86VD1 984 aa16.62■□□□□ 0.25
CGREF1-209ENST00000640154 PKD1L3Q7Z443 1732 aa16.62■□□□□ 0.25
CGREF1-209ENST00000640154 LRP5O75197 1615 aa16.61■□□□□ 0.25
CGREF1-209ENST00000640154 PER1O15534 1290 aaPredicted RBP16.61■□□□□ 0.25
CGREF1-209ENST00000640154 PROM2Q8N271 834 aa16.61■□□□□ 0.25
CGREF1-209ENST00000640154 ACSBG1Q96GR2 724 aa16.61■□□□□ 0.25
CGREF1-209ENST00000640154 DOT1LQ8TEK3 1739 aa16.6■□□□□ 0.25
CGREF1-209ENST00000640154 NBPF14Q5TI25 921 aa16.6■□□□□ 0.25
CGREF1-209ENST00000640154 EIF4A2Q14240 407 aaKnown RBP16.59■□□□□ 0.25
CGREF1-209ENST00000640154 EYA1Q99502 592 aa16.59■□□□□ 0.25
CGREF1-209ENST00000640154 PCDH11XQ9BZA7 1347 aa16.57■□□□□ 0.24
CGREF1-209ENST00000640154 PCDH11YQ9BZA8 1340 aa16.57■□□□□ 0.24
CGREF1-209ENST00000640154 TXNRD1Q16881 649 aa16.57■□□□□ 0.24
CGREF1-209ENST00000640154 PLEKHG2Q9H7P9 1386 aa16.56■□□□□ 0.24
CGREF1-209ENST00000640154 NPC1L1Q9UHC9 1359 aa16.56■□□□□ 0.24
CGREF1-209ENST00000640154 IGSF1Q8N6C5 1336 aa16.55■□□□□ 0.24
CGREF1-209ENST00000640154 CYP27B1O15528 508 aa16.55■□□□□ 0.24
CGREF1-209ENST00000640154 PRIM1P49642 420 aaKnown RBP16.55■□□□□ 0.24
CGREF1-209ENST00000640154 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
CGREF1-209ENST00000640154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.55■□□□□ 0.24
CGREF1-209ENST00000640154 LY75O60449 1722 aa16.53■□□□□ 0.24
CGREF1-209ENST00000640154 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
CGREF1-209ENST00000640154 ITGB4P16144 1822 aa16.53■□□□□ 0.24
CGREF1-209ENST00000640154 SPG7Q9UQ90 795 aa16.52■□□□□ 0.24
CGREF1-209ENST00000640154 TOGARAM1Q9Y4F4 1720 aa16.52■□□□□ 0.24
CGREF1-209ENST00000640154 CASZ1Q86V15 1759 aa16.51■□□□□ 0.23
CGREF1-209ENST00000640154 NKX1-1Q15270 411 aaPredicted RBP16.51■□□□□ 0.23
CGREF1-209ENST00000640154 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
CGREF1-209ENST00000640154 SLC27A3Q5K4L6 730 aa16.5■□□□□ 0.23
CGREF1-209ENST00000640154 IL13P35225 146 aa16.49■□□□□ 0.23
CGREF1-209ENST00000640154 SLC15A2Q16348 729 aa16.49■□□□□ 0.23
CGREF1-209ENST00000640154 CC2D1BQ5T0F9 858 aaKnown RBP16.49■□□□□ 0.23
CGREF1-209ENST00000640154 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
CGREF1-209ENST00000640154 STK32BQ9NY57 414 aa16.49■□□□□ 0.23
CGREF1-209ENST00000640154 MTHFSP49914 203 aa16.48■□□□□ 0.23
CGREF1-209ENST00000640154 KDRP35968 1356 aa16.48■□□□□ 0.23
CGREF1-209ENST00000640154 PHKG2P15735 406 aa16.47■□□□□ 0.23
CGREF1-209ENST00000640154 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
CGREF1-209ENST00000640154 QSER1Q2KHR3 1735 aa16.47■□□□□ 0.23
CGREF1-209ENST00000640154 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
CGREF1-209ENST00000640154 AMOTQ4VCS5 1084 aa16.44■□□□□ 0.22
CGREF1-209ENST00000640154 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
CGREF1-209ENST00000640154 SULT6B1Q6IMI4 303 aa16.44■□□□□ 0.22
CGREF1-209ENST00000640154 MPRIPQ6WCQ1 1025 aa16.44■□□□□ 0.22
CGREF1-209ENST00000640154 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
CGREF1-209ENST00000640154 PDGFDQ9GZP0 370 aaPredicted RBP16.44■□□□□ 0.22
CGREF1-209ENST00000640154 SPON1Q9HCB6 807 aa16.44■□□□□ 0.22
CGREF1-209ENST00000640154 TAF1LQ8IZX4 1826 aa16.44■□□□□ 0.22
CGREF1-209ENST00000640154 TUBGCP6Q96RT7 1819 aa16.44■□□□□ 0.22
CGREF1-209ENST00000640154 COL3A1P02461 1466 aaPredicted RBP16.43■□□□□ 0.22
CGREF1-209ENST00000640154 ZNF827Q17R98 1081 aa16.43■□□□□ 0.22
CGREF1-209ENST00000640154 PIGBQ92521 554 aa16.43■□□□□ 0.22
CGREF1-209ENST00000640154 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
CGREF1-209ENST00000640154 CCNL1Q9UK58 526 aaPredicted RBP16.42■□□□□ 0.22
CGREF1-209ENST00000640154 PALLDQ8WX93 1383 aa16.41■□□□□ 0.22
CGREF1-209ENST00000640154 C5P01031 1676 aa16.41■□□□□ 0.22
CGREF1-209ENST00000640154 DIAPH1O60610 1272 aaKnown RBP16.41■□□□□ 0.22
CGREF1-209ENST00000640154 HSP90AB1P08238 724 aaKnown RBP16.41■□□□□ 0.22
CGREF1-209ENST00000640154 KCNQ4P56696 695 aa16.41■□□□□ 0.22
CGREF1-209ENST00000640154 ZNF530Q6P9A1 599 aaPredicted RBP16.41■□□□□ 0.22
CGREF1-209ENST00000640154 ERVV-2B6SEH9 535 aa16.4■□□□□ 0.22
CGREF1-209ENST00000640154 DCAF5Q96JK2 942 aa16.4■□□□□ 0.22
CGREF1-209ENST00000640154 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
CGREF1-209ENST00000640154 HMGB2P26583 209 aaKnown RBP16.39■□□□□ 0.21
CGREF1-209ENST00000640154 CNGB1Q14028 1251 aaPredicted RBP16.39■□□□□ 0.21
CGREF1-209ENST00000640154 SCN11AQ9UI33 1791 aa16.38■□□□□ 0.21
CGREF1-209ENST00000640154 KDM6AO15550 1401 aaPredicted RBP16.38■□□□□ 0.21
CGREF1-209ENST00000640154 ZBTB7AO95365 584 aa16.38■□□□□ 0.21
CGREF1-209ENST00000640154 MTFR1LQ9H019 292 aa16.38■□□□□ 0.21
CGREF1-209ENST00000640154 COL24A1Q17RW2 1714 aa16.37■□□□□ 0.21
CGREF1-209ENST00000640154 PTGER2P43116 358 aa16.37■□□□□ 0.21
CGREF1-209ENST00000640154 VIRMAQ69YN4 1812 aaKnown RBP16.37■□□□□ 0.21
CGREF1-209ENST00000640154 PNPLA7Q6ZV29 1317 aa16.37■□□□□ 0.21
CGREF1-209ENST00000640154 HMOX1P09601 288 aa16.36■□□□□ 0.21
CGREF1-209ENST00000640154 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
CGREF1-209ENST00000640154 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
CGREF1-209ENST00000640154 ASAP1Q9ULH1 1129 aa16.36■□□□□ 0.21
CGREF1-209ENST00000640154 ZNF831Q5JPB2 1677 aa16.35■□□□□ 0.21
CGREF1-209ENST00000640154 PPP2R1AP30153 589 aa16.35■□□□□ 0.21
CGREF1-209ENST00000640154 SLC16A10Q8TF71 515 aa16.35■□□□□ 0.21
CGREF1-209ENST00000640154 SGIP1Q9BQI5 828 aa16.35■□□□□ 0.21
CGREF1-209ENST00000640154 C4BP0C0L5 1744 aa16.35■□□□□ 0.21
CGREF1-209ENST00000640154 LOC102724428A0A0B4J2F2 783 aa16.34■□□□□ 0.21
CGREF1-209ENST00000640154 SIK1P57059 783 aa16.34■□□□□ 0.21
CGREF1-209ENST00000640154 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
CGREF1-209ENST00000640154 CFAP53Q96M91 514 aa16.34■□□□□ 0.21
CGREF1-209ENST00000640154 ATG3Q9NT62 314 aa16.34■□□□□ 0.21
CGREF1-209ENST00000640154 PPP1R1BQ9UD71 204 aaPredicted RBP16.34■□□□□ 0.21
CGREF1-209ENST00000640154 ATF5Q9Y2D1 282 aaPredicted RBP16.34■□□□□ 0.21
CGREF1-209ENST00000640154 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
CGREF1-209ENST00000640154 UBR3Q6ZT12 1888 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms