RNA–Protein interactions for RNA: ENST00000640055.1

PRICKLE1-215, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-215ENST00000640055 TBX22Q9Y458 520 aa15.15■□□□□ 0.02
PRICKLE1-215ENST00000640055 PA2G4Q9UQ80 394 aaKnown RBP15.14■□□□□ 0.01
PRICKLE1-215ENST00000640055 UPF3BQ9BZI7 483 aaKnown RBP15.14■□□□□ 0.01
PRICKLE1-215ENST00000640055 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
PRICKLE1-215ENST00000640055 TULP4Q9NRJ4 1543 aa15.14■□□□□ 0.01
PRICKLE1-215ENST00000640055 INSRP06213 1382 aa15.14■□□□□ 0.01
PRICKLE1-215ENST00000640055 CCDC30Q5VVM6 783 aa15.13■□□□□ 0.01
PRICKLE1-215ENST00000640055 AXIN2Q9Y2T1 843 aa15.13■□□□□ 0.01
PRICKLE1-215ENST00000640055 DIP2CQ9Y2E4 1556 aa15.13■□□□□ 0.01
PRICKLE1-215ENST00000640055 KDM5AP29375 1690 aaKnown RBP15.13■□□□□ 0.01
PRICKLE1-215ENST00000640055 NDUFB9Q9Y6M9 179 aa15.13■□□□□ 0.01
PRICKLE1-215ENST00000640055 ZBTB7BO15156 539 aaPredicted RBP15.12■□□□□ 0.01
PRICKLE1-215ENST00000640055 FOSBP53539 338 aa15.12■□□□□ 0.01
PRICKLE1-215ENST00000640055 IL27Q8NEV9 243 aa15.12■□□□□ 0.01
PRICKLE1-215ENST00000640055 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
PRICKLE1-215ENST00000640055 MROH2AA6NES4 1674 aa15.12■□□□□ 0.01
PRICKLE1-215ENST00000640055 MYOM2P54296 1465 aa15.11■□□□□ 0.01
PRICKLE1-215ENST00000640055 HMMRO75330 724 aa15.11■□□□□ 0.01
PRICKLE1-215ENST00000640055 BRPF3Q9ULD4 1205 aa15.11■□□□□ 0.01
PRICKLE1-215ENST00000640055 PLCB2Q00722 1185 aa15.11■□□□□ 0.01
PRICKLE1-215ENST00000640055 PLEKHO1Q53GL0 409 aaPredicted RBP15.11■□□□□ 0.01
PRICKLE1-215ENST00000640055 CHAMP1Q96JM3 812 aa15.11■□□□□ 0.01
PRICKLE1-215ENST00000640055 TBC1D2Q9BYX2 928 aa15.11■□□□□ 0.01
PRICKLE1-215ENST00000640055 CASC1Q6TDU7 716 aa15.11■□□□□ 0.01
PRICKLE1-215ENST00000640055 CHMP4CQ96CF2 233 aa15.11■□□□□ 0.01
PRICKLE1-215ENST00000640055 NEUROD6Q96NK8 337 aa15.1■□□□□ 0.01
PRICKLE1-215ENST00000640055 GLI2P10070 1586 aa15.1■□□□□ 0.01
PRICKLE1-215ENST00000640055 NPC1L1Q9UHC9 1359 aa15.1■□□□□ 0.01
PRICKLE1-215ENST00000640055 ZBTB3Q9H5J0 574 aa15.1■□□□□ 0.01
PRICKLE1-215ENST00000640055 STK11IPQ8N1F8 1099 aa15.1■□□□□ 0.01
PRICKLE1-215ENST00000640055 CCDC8Q9H0W5 538 aaPredicted RBP15.1■□□□□ 0.01
PRICKLE1-215ENST00000640055 PNMA6EA0A0J9YXQ4 647 aa15.09■□□□□ 0.01
PRICKLE1-215ENST00000640055 CCDC27Q2M243 656 aa15.09■□□□□ 0.01
PRICKLE1-215ENST00000640055 GNAI2P04899 355 aa15.09■□□□□ 0.01
PRICKLE1-215ENST00000640055 PROSER3Q2NL68 480 aa15.09■□□□□ 0.01
PRICKLE1-215ENST00000640055 NPHP1O15259 732 aa15.09■□□□□ 0.01
PRICKLE1-215ENST00000640055 TBC1D9Q6ZT07 1266 aa15.08■□□□□ 0.01
PRICKLE1-215ENST00000640055 SIRT2Q8IXJ6 389 aa15.08■□□□□ 0.01
PRICKLE1-215ENST00000640055 NBPF7P0C2Y1 421 aaPredicted RBP15.08■□□□□ 0
PRICKLE1-215ENST00000640055 NSD2O96028 1365 aa15.08■□□□□ 0
PRICKLE1-215ENST00000640055 SRCIN1Q9C0H9 1055 aa15.08■□□□□ 0
PRICKLE1-215ENST00000640055 ADGRB3O60242 1522 aa15.08■□□□□ 0
PRICKLE1-215ENST00000640055 MROH1Q8NDA8 1641 aa15.08■□□□□ 0
PRICKLE1-215ENST00000640055 FGD1P98174 961 aa15.07■□□□□ 0
PRICKLE1-215ENST00000640055 MPNDQ8N594 471 aa15.07■□□□□ 0
PRICKLE1-215ENST00000640055 CABP4P57796 275 aa15.07■□□□□ 0
PRICKLE1-215ENST00000640055 ALKQ9UM73 1620 aa15.07■□□□□ 0
PRICKLE1-215ENST00000640055 CWC27Q6UX04 472 aaKnown RBP15.07■□□□□ 0
PRICKLE1-215ENST00000640055 MAP3K2Q9Y2U5 619 aa15.07■□□□□ 0
PRICKLE1-215ENST00000640055 TATP17735 454 aaPredicted RBP15.06■□□□□ 0
PRICKLE1-215ENST00000640055 TCEANC2Q96MN5 208 aa15.06■□□□□ 0
PRICKLE1-215ENST00000640055 PLEKHG3A1L390 1219 aa15.06■□□□□ 0
PRICKLE1-215ENST00000640055 NEK4P51957 841 aa15.06■□□□□ 0
PRICKLE1-215ENST00000640055 PPP1R42Q7Z4L9 355 aa15.06■□□□□ 0
PRICKLE1-215ENST00000640055 GPTP24298 496 aa15.06■□□□□ 0
PRICKLE1-215ENST00000640055 CHMP4BQ9H444 224 aaKnown RBP15.06■□□□□ 0
PRICKLE1-215ENST00000640055 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
PRICKLE1-215ENST00000640055 KCNQ4P56696 695 aa15.05■□□□□ 0
PRICKLE1-215ENST00000640055 MYD88Q99836 296 aa15.05■□□□□ 0
PRICKLE1-215ENST00000640055 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.05■□□□□ 0
PRICKLE1-215ENST00000640055 SPG7Q9UQ90 795 aa15.05■□□□□ 0
PRICKLE1-215ENST00000640055 USP19O94966 1318 aa15.05■□□□□ -0
PRICKLE1-215ENST00000640055 CHL1O00533 1208 aa15.05■□□□□ -0
PRICKLE1-215ENST00000640055 ALDH1L2Q3SY69 923 aa15.05■□□□□ -0
PRICKLE1-215ENST00000640055 ACSBG1Q96GR2 724 aa15.05■□□□□ -0
PRICKLE1-215ENST00000640055 DNAJC2Q99543 621 aaKnown RBP15.05■□□□□ -0
PRICKLE1-215ENST00000640055 MSH6P52701 1360 aa15.05■□□□□ -0
PRICKLE1-215ENST00000640055 FAM182BQ5T319 152 aa15.04■□□□□ -0
PRICKLE1-215ENST00000640055 PTPRMP28827 1452 aa15.04■□□□□ -0
PRICKLE1-215ENST00000640055 CPS1P31327 1500 aa15.04■□□□□ -0
PRICKLE1-215ENST00000640055 FLT4P35916 1363 aa15.03■□□□□ -0
PRICKLE1-215ENST00000640055 NEXMIFQ5QGS0 1516 aa15.03■□□□□ -0
PRICKLE1-215ENST00000640055 TAF7LQ5H9L4 462 aa15.03■□□□□ -0
PRICKLE1-215ENST00000640055 COPS6Q7L5N1 327 aa15.03■□□□□ -0
PRICKLE1-215ENST00000640055 BOLA2Q9H3K6 86 aa15.03■□□□□ -0
PRICKLE1-215ENST00000640055 ADGRB1O14514 1584 aa15.03■□□□□ -0
PRICKLE1-215ENST00000640055 CLTCQ00610 1675 aaKnown RBP15.03■□□□□ -0
PRICKLE1-215ENST00000640055 IFIT2P09913 472 aaKnown RBP15.03■□□□□ -0
PRICKLE1-215ENST00000640055 CPA1P15085 419 aa15.03■□□□□ -0
PRICKLE1-215ENST00000640055 GORABQ5T7V8 394 aa15.03■□□□□ -0
PRICKLE1-215ENST00000640055 KIAA1211Q6ZU35 1233 aa15.03■□□□□ -0
PRICKLE1-215ENST00000640055 CAMSAP1Q5T5Y3 1602 aa15.03■□□□□ -0
PRICKLE1-215ENST00000640055 SDSP20132 328 aa15.02■□□□□ -0
PRICKLE1-215ENST00000640055 PIK3C2BO00750 1634 aa15.02■□□□□ -0
PRICKLE1-215ENST00000640055 ARAP3Q8WWN8 1544 aa15.02□□□□□ -0.01
PRICKLE1-215ENST00000640055 NUCB1Q02818 461 aa15.02□□□□□ -0.01
PRICKLE1-215ENST00000640055 CEP85Q6P2H3 762 aa15.02□□□□□ -0.01
PRICKLE1-215ENST00000640055 UBE3BQ7Z3V4 1068 aa15.02□□□□□ -0.01
PRICKLE1-215ENST00000640055 LRRCC1Q9C099 1032 aa15.02□□□□□ -0.01
PRICKLE1-215ENST00000640055 C19orf44Q9H6X5 657 aa15.02□□□□□ -0.01
PRICKLE1-215ENST00000640055 NEXNQ0ZGT2 675 aa15.01□□□□□ -0.01
PRICKLE1-215ENST00000640055 USP16Q9Y5T5 823 aa15.01□□□□□ -0.01
PRICKLE1-215ENST00000640055 QRICH2Q9H0J4 1663 aa15.01□□□□□ -0.01
PRICKLE1-215ENST00000640055 ZNF335Q9H4Z2 1342 aaPredicted RBP15.01□□□□□ -0.01
PRICKLE1-215ENST00000640055 PTPRUQ92729 1446 aa15□□□□□ -0.01
PRICKLE1-215ENST00000640055 CDC45O75419 566 aa15□□□□□ -0.01
PRICKLE1-215ENST00000640055 BICDL1Q6ZP65 573 aa15□□□□□ -0.01
PRICKLE1-215ENST00000640055 XAGE3Q8WTP9 111 aa15□□□□□ -0.01
PRICKLE1-215ENST00000640055 EDC3Q96F86 508 aaKnown RBP15□□□□□ -0.01
PRICKLE1-215ENST00000640055 GSE1Q14687 1217 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms