RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
MCF2L2-214ENST00000640043 EXOC5O00471 708 aa13.25□□□□□ -0.29
MCF2L2-214ENST00000640043 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
MCF2L2-214ENST00000640043 ARHGEF25Q86VW2 580 aa13.25□□□□□ -0.29
MCF2L2-214ENST00000640043 GOLGB1Q14789 3259 aaKnown RBP13.25□□□□□ -0.29
MCF2L2-214ENST00000640043 PIK3C2AO00443 1686 aa13.24□□□□□ -0.29
MCF2L2-214ENST00000640043 TRPM1Q7Z4N2 1603 aa13.24□□□□□ -0.29
MCF2L2-214ENST00000640043 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
MCF2L2-214ENST00000640043 PDGFDQ9GZP0 370 aaPredicted RBP13.24□□□□□ -0.29
MCF2L2-214ENST00000640043 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
MCF2L2-214ENST00000640043 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
MCF2L2-214ENST00000640043 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
MCF2L2-214ENST00000640043 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
MCF2L2-214ENST00000640043 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
MCF2L2-214ENST00000640043 TTC21AQ8NDW8 1320 aa13.22□□□□□ -0.29
MCF2L2-214ENST00000640043 PAPPAQ13219 1627 aa13.22□□□□□ -0.29
MCF2L2-214ENST00000640043 PTF1AQ7RTS3 328 aa13.22□□□□□ -0.29
MCF2L2-214ENST00000640043 CABP1Q9NZU7 370 aa13.22□□□□□ -0.29
MCF2L2-214ENST00000640043 AXIN2Q9Y2T1 843 aa13.22□□□□□ -0.29
MCF2L2-214ENST00000640043 QSER1Q2KHR3 1735 aa13.22□□□□□ -0.29
MCF2L2-214ENST00000640043 SLC16A10Q8TF71 515 aa13.21□□□□□ -0.29
MCF2L2-214ENST00000640043 CABP2Q9NPB3 220 aa13.21□□□□□ -0.29
MCF2L2-214ENST00000640043 EVC2Q86UK5 1308 aa13.2□□□□□ -0.3
MCF2L2-214ENST00000640043 COL24A1Q17RW2 1714 aa13.2□□□□□ -0.3
MCF2L2-214ENST00000640043 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
MCF2L2-214ENST00000640043 IFFO2Q5TF58 517 aa13.19□□□□□ -0.3
MCF2L2-214ENST00000640043 NFAT5O94916 1531 aa13.18□□□□□ -0.3
MCF2L2-214ENST00000640043 NBPF1Q3BBV0 1214 aa13.18□□□□□ -0.3
MCF2L2-214ENST00000640043 BTAF1O14981 1849 aa13.18□□□□□ -0.3
MCF2L2-214ENST00000640043 TTC21BQ7Z4L5 1316 aa13.17□□□□□ -0.3
MCF2L2-214ENST00000640043 APBB1O00213 710 aa13.17□□□□□ -0.3
MCF2L2-214ENST00000640043 GIGYF1O75420 1035 aaPredicted RBP13.17□□□□□ -0.3
MCF2L2-214ENST00000640043 SLC27A3Q5K4L6 730 aa13.17□□□□□ -0.3
MCF2L2-214ENST00000640043 USP54Q70EL1 1684 aa13.17□□□□□ -0.3
MCF2L2-214ENST00000640043 POLD1P28340 1107 aa13.16□□□□□ -0.3
MCF2L2-214ENST00000640043 GPR162Q16538 588 aa13.16□□□□□ -0.3
MCF2L2-214ENST00000640043 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
MCF2L2-214ENST00000640043 WDR70Q9NW82 654 aa13.16□□□□□ -0.3
MCF2L2-214ENST00000640043 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
MCF2L2-214ENST00000640043 IL2RBP14784 551 aa13.15□□□□□ -0.3
MCF2L2-214ENST00000640043 RYDENQ9NUL5 291 aaKnown RBP13.15□□□□□ -0.3
MCF2L2-214ENST00000640043 ERBB3P21860 1342 aa13.14□□□□□ -0.31
MCF2L2-214ENST00000640043 HMGB2P26583 209 aaKnown RBP13.14□□□□□ -0.31
MCF2L2-214ENST00000640043 USP31Q70CQ4 1352 aa13.14□□□□□ -0.31
MCF2L2-214ENST00000640043 GRIN3BO60391 1043 aa13.13□□□□□ -0.31
MCF2L2-214ENST00000640043 KCTD17Q8N5Z5 321 aa13.13□□□□□ -0.31
MCF2L2-214ENST00000640043 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
MCF2L2-214ENST00000640043 KTN1Q86UP2 1357 aaKnown RBP13.12□□□□□ -0.31
MCF2L2-214ENST00000640043 IGSF3O75054 1194 aa13.12□□□□□ -0.31
MCF2L2-214ENST00000640043 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
MCF2L2-214ENST00000640043 FAM208AQ9UK61 1670 aaKnown RBP13.12□□□□□ -0.31
MCF2L2-214ENST00000640043 MIER1Q8N108 512 aa13.11□□□□□ -0.31
MCF2L2-214ENST00000640043 LTN1O94822 1766 aa13.11□□□□□ -0.31
MCF2L2-214ENST00000640043 SBNO2Q9Y2G9 1366 aa13.1□□□□□ -0.31
MCF2L2-214ENST00000640043 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
MCF2L2-214ENST00000640043 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
MCF2L2-214ENST00000640043 NLRP2Q9NX02 1062 aa13.1□□□□□ -0.31
MCF2L2-214ENST00000640043 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
MCF2L2-214ENST00000640043 ACSBG1Q96GR2 724 aa13.09□□□□□ -0.31
MCF2L2-214ENST00000640043 SOX12O15370 315 aa13.08□□□□□ -0.32
MCF2L2-214ENST00000640043 RAD21O60216 631 aa13.08□□□□□ -0.32
MCF2L2-214ENST00000640043 CDK11BP21127 795 aaKnown RBP13.08□□□□□ -0.32
MCF2L2-214ENST00000640043 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
MCF2L2-214ENST00000640043 TFCP2L1Q9NZI6 479 aa13.08□□□□□ -0.32
MCF2L2-214ENST00000640043 PNPLA7Q6ZV29 1317 aa13.08□□□□□ -0.32
MCF2L2-214ENST00000640043 LY75O60449 1722 aa13.08□□□□□ -0.32
MCF2L2-214ENST00000640043 TUBGCP6Q96RT7 1819 aa13.07□□□□□ -0.32
MCF2L2-214ENST00000640043 HSP90B1P14625 803 aaKnown RBP13.07□□□□□ -0.32
MCF2L2-214ENST00000640043 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
MCF2L2-214ENST00000640043 ANKRD36BQ8N2N9 1353 aa13.06□□□□□ -0.32
MCF2L2-214ENST00000640043 ZMYND10O75800 440 aa13.05□□□□□ -0.32
MCF2L2-214ENST00000640043 ROCK2O75116 1388 aaKnown RBP13.05□□□□□ -0.32
MCF2L2-214ENST00000640043 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
MCF2L2-214ENST00000640043 IL27Q8NEV9 243 aa13.04□□□□□ -0.32
MCF2L2-214ENST00000640043 ZBTB47Q9UFB7 747 aaPredicted RBP13.04□□□□□ -0.32
MCF2L2-214ENST00000640043 HDGFL2Q7Z4V5 671 aaPredicted RBP13.03□□□□□ -0.32
MCF2L2-214ENST00000640043 PUS7Q96PZ0 661 aaKnown RBP13.03□□□□□ -0.32
MCF2L2-214ENST00000640043 CD2APQ9Y5K6 639 aa13.03□□□□□ -0.32
MCF2L2-214ENST00000640043 RGS22Q8NE09 1264 aa13.02□□□□□ -0.33
MCF2L2-214ENST00000640043 FLAD1Q8NFF5 587 aa13.02□□□□□ -0.33
MCF2L2-214ENST00000640043 NLGN2Q8NFZ4 835 aa13.02□□□□□ -0.33
MCF2L2-214ENST00000640043 IP6K1Q92551 441 aa13.02□□□□□ -0.33
MCF2L2-214ENST00000640043 L3MBTL2Q969R5 705 aa13.02□□□□□ -0.33
MCF2L2-214ENST00000640043 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
MCF2L2-214ENST00000640043 CD163L1Q9NR16 1453 aa13.02□□□□□ -0.33
MCF2L2-214ENST00000640043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.01□□□□□ -0.33
MCF2L2-214ENST00000640043 TRAIPQ9BWF2 469 aa13.01□□□□□ -0.33
MCF2L2-214ENST00000640043 TERF2IPQ9NYB0 399 aa13.01□□□□□ -0.33
MCF2L2-214ENST00000640043 DOT1LQ8TEK3 1739 aa13.01□□□□□ -0.33
MCF2L2-214ENST00000640043 ATP10DQ9P241 1426 aa13□□□□□ -0.33
MCF2L2-214ENST00000640043 ADCY9O60503 1353 aa13□□□□□ -0.33
MCF2L2-214ENST00000640043 YBX3P16989 372 aaKnown RBP eCLIP13□□□□□ -0.33
MCF2L2-214ENST00000640043 HSPA6P17066 643 aa13□□□□□ -0.33
MCF2L2-214ENST00000640043 NME9Q86XW9 330 aa13□□□□□ -0.33
MCF2L2-214ENST00000640043 DDX54Q8TDD1 881 aaKnown RBP13□□□□□ -0.33
MCF2L2-214ENST00000640043 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
MCF2L2-214ENST00000640043 CCNL1Q9UK58 526 aaPredicted RBP13□□□□□ -0.33
MCF2L2-214ENST00000640043 NSD2O96028 1365 aa12.99□□□□□ -0.33
MCF2L2-214ENST00000640043 USP47Q96K76 1375 aa12.99□□□□□ -0.33
MCF2L2-214ENST00000640043 STK25O00506 426 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms