RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 PPM1GO15355 546 aaPredicted RBP24.25■■□□□ 1.47
PTPN11-207ENST00000639857 NBPF14Q5TI25 921 aa24.25■■□□□ 1.47
PTPN11-207ENST00000639857 ZCRB1Q8TBF4 217 aaKnown RBP24.25■■□□□ 1.47
PTPN11-207ENST00000639857 PTF1AQ7RTS3 328 aa24.24■■□□□ 1.47
PTPN11-207ENST00000639857 PLEKHG2Q9H7P9 1386 aa24.24■■□□□ 1.47
PTPN11-207ENST00000639857 TATP17735 454 aaPredicted RBP24.23■■□□□ 1.47
PTPN11-207ENST00000639857 SRCAPQ6ZRS2 3230 aa24.22■■□□□ 1.47
PTPN11-207ENST00000639857 PSDA5PKW4 1024 aaPredicted RBP24.22■■□□□ 1.47
PTPN11-207ENST00000639857 USHBP1Q8N6Y0 703 aa24.22■■□□□ 1.47
PTPN11-207ENST00000639857 DDX54Q8TDD1 881 aaKnown RBP24.22■■□□□ 1.47
PTPN11-207ENST00000639857 KCNQ2O43526 872 aa24.21■■□□□ 1.47
PTPN11-207ENST00000639857 R3HDM1Q15032 1099 aaKnown RBP24.21■■□□□ 1.47
PTPN11-207ENST00000639857 AMER1Q5JTC6 1135 aaPredicted RBP24.21■■□□□ 1.47
PTPN11-207ENST00000639857 MORC1Q86VD1 984 aa24.21■■□□□ 1.47
PTPN11-207ENST00000639857 PCDH11XQ9BZA7 1347 aa24.2■■□□□ 1.46
PTPN11-207ENST00000639857 PCDH11YQ9BZA8 1340 aa24.2■■□□□ 1.46
PTPN11-207ENST00000639857 TNNT2P45379 298 aaPredicted RBP24.19■■□□□ 1.46
PTPN11-207ENST00000639857 ACSBG1Q96GR2 724 aa24.19■■□□□ 1.46
PTPN11-207ENST00000639857 NPC1L1Q9UHC9 1359 aa24.17■■□□□ 1.46
PTPN11-207ENST00000639857 PER1O15534 1290 aaPredicted RBP24.17■■□□□ 1.46
PTPN11-207ENST00000639857 TXNRD1Q16881 649 aa24.17■■□□□ 1.46
PTPN11-207ENST00000639857 EYA1Q99502 592 aa24.17■■□□□ 1.46
PTPN11-207ENST00000639857 LY75O60449 1722 aa24.17■■□□□ 1.46
PTPN11-207ENST00000639857 PAPPAQ13219 1627 aa24.17■■□□□ 1.46
PTPN11-207ENST00000639857 EIF4A2Q14240 407 aaKnown RBP24.16■■□□□ 1.46
PTPN11-207ENST00000639857 PROM2Q8N271 834 aa24.16■■□□□ 1.46
PTPN11-207ENST00000639857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.15■■□□□ 1.465e-7■■□□□ 12.6
PTPN11-207ENST00000639857 CASZ1Q86V15 1759 aa24.14■■□□□ 1.45
PTPN11-207ENST00000639857 IGSF1Q8N6C5 1336 aa24.13■■□□□ 1.45
PTPN11-207ENST00000639857 ITGB4P16144 1822 aa24.13■■□□□ 1.45
PTPN11-207ENST00000639857 TOGARAM1Q9Y4F4 1720 aa24.13■■□□□ 1.45
PTPN11-207ENST00000639857 SPG7Q9UQ90 795 aa24.12■■□□□ 1.45
PTPN11-207ENST00000639857 QSER1Q2KHR3 1735 aa24.1■■□□□ 1.45
PTPN11-207ENST00000639857 PRIM1P49642 420 aaKnown RBP24.1■■□□□ 1.45
PTPN11-207ENST00000639857 ANO8Q9HCE9 1232 aaPredicted RBP24.09■■□□□ 1.45
PTPN11-207ENST00000639857 CYP27B1O15528 508 aa24.08■■□□□ 1.45
PTPN11-207ENST00000639857 SLC27A3Q5K4L6 730 aa24.08■■□□□ 1.45
PTPN11-207ENST00000639857 SYTL4Q96C24 671 aaPredicted RBP24.08■■□□□ 1.45
PTPN11-207ENST00000639857 NKX1-1Q15270 411 aaPredicted RBP24.07■■□□□ 1.44
PTPN11-207ENST00000639857 STK32BQ9NY57 414 aa24.07■■□□□ 1.44
PTPN11-207ENST00000639857 KDRP35968 1356 aa24.04■■□□□ 1.44
PTPN11-207ENST00000639857 SLC15A2Q16348 729 aa24.04■■□□□ 1.44
PTPN11-207ENST00000639857 CC2D1BQ5T0F9 858 aaKnown RBP24.03■■□□□ 1.44
PTPN11-207ENST00000639857 HMGB2P26583 209 aaKnown RBP24.02■■□□□ 1.44
PTPN11-207ENST00000639857 IFNL2Q8IZJ0 200 aa24.02■■□□□ 1.44
PTPN11-207ENST00000639857 IL13P35225 146 aa24.01■■□□□ 1.43
PTPN11-207ENST00000639857 MTHFSP49914 203 aa24.01■■□□□ 1.43
PTPN11-207ENST00000639857 TAF1LQ8IZX4 1826 aa24■■□□□ 1.43
PTPN11-207ENST00000639857 C5P01031 1676 aa24■■□□□ 1.43
PTPN11-207ENST00000639857 PHKG2P15735 406 aa24■■□□□ 1.43
PTPN11-207ENST00000639857 AMOTQ4VCS5 1084 aa24■■□□□ 1.43
PTPN11-207ENST00000639857 SPON1Q9HCB6 807 aa24■■□□□ 1.43
PTPN11-207ENST00000639857 LRRC4BQ9NT99 713 aa24■■□□□ 1.43
PTPN11-207ENST00000639857 TUBGCP6Q96RT7 1819 aa24■■□□□ 1.43
PTPN11-207ENST00000639857 PLEKHO1Q53GL0 409 aaPredicted RBP23.98■■□□□ 1.43
PTPN11-207ENST00000639857 HSP90AB1P08238 724 aaKnown RBP23.97■■□□□ 1.43
PTPN11-207ENST00000639857 COL3A1P02461 1466 aaPredicted RBP23.96■■□□□ 1.43
PTPN11-207ENST00000639857 PALLDQ8WX93 1383 aa23.96■■□□□ 1.43
PTPN11-207ENST00000639857 MPRIPQ6WCQ1 1025 aa23.96■■□□□ 1.43
PTPN11-207ENST00000639857 SMARCC1Q92922 1105 aaPredicted RBP23.96■■□□□ 1.43
PTPN11-207ENST00000639857 SULT6B1Q6IMI4 303 aa23.95■■□□□ 1.42
PTPN11-207ENST00000639857 AKT1S1Q96B36 256 aa23.95■■□□□ 1.42
PTPN11-207ENST00000639857 CCNL1Q9UK58 526 aaPredicted RBP23.95■■□□□ 1.42
PTPN11-207ENST00000639857 AEBP1Q8IUX7 1158 aa23.94■■□□□ 1.42
PTPN11-207ENST00000639857 SCN11AQ9UI33 1791 aa23.93■■□□□ 1.42
PTPN11-207ENST00000639857 ZNF831Q5JPB2 1677 aa23.93■■□□□ 1.42
PTPN11-207ENST00000639857 DIAPH1O60610 1272 aaKnown RBP23.93■■□□□ 1.42
PTPN11-207ENST00000639857 ZNF827Q17R98 1081 aa23.93■■□□□ 1.42
PTPN11-207ENST00000639857 VIRMAQ69YN4 1812 aaKnown RBP23.93■■□□□ 1.42
PTPN11-207ENST00000639857 COL24A1Q17RW2 1714 aa23.93■■□□□ 1.42
PTPN11-207ENST00000639857 PIGBQ92521 554 aa23.92■■□□□ 1.42
PTPN11-207ENST00000639857 DCAF5Q96JK2 942 aa23.92■■□□□ 1.42
PTPN11-207ENST00000639857 TMOD3Q9NYL9 352 aa23.92■■□□□ 1.42
PTPN11-207ENST00000639857 ERVV-2B6SEH9 535 aa23.91■■□□□ 1.42
PTPN11-207ENST00000639857 ZNF530Q6P9A1 599 aaPredicted RBP23.91■■□□□ 1.42
PTPN11-207ENST00000639857 PDGFDQ9GZP0 370 aaPredicted RBP23.9■■□□□ 1.42
PTPN11-207ENST00000639857 MTFR1LQ9H019 292 aa23.9■■□□□ 1.42
PTPN11-207ENST00000639857 C4BP0C0L5 1744 aa23.9■■□□□ 1.42
PTPN11-207ENST00000639857 C1orf141Q5JVX7 400 aa23.89■■□□□ 1.41
PTPN11-207ENST00000639857 KDM6AO15550 1401 aaPredicted RBP23.89■■□□□ 1.41
PTPN11-207ENST00000639857 SLC16A10Q8TF71 515 aa23.88■■□□□ 1.41
PTPN11-207ENST00000639857 PPP1R1BQ9UD71 204 aaPredicted RBP23.87■■□□□ 1.41
PTPN11-207ENST00000639857 ADAMTS7Q9UKP4 1686 aa23.86■■□□□ 1.41
PTPN11-207ENST00000639857 ZBTB7AO95365 584 aa23.86■■□□□ 1.41
PTPN11-207ENST00000639857 KCNQ4P56696 695 aa23.86■■□□□ 1.41
PTPN11-207ENST00000639857 TFCP2L1Q9NZI6 479 aa23.86■■□□□ 1.41
PTPN11-207ENST00000639857 PNPLA7Q6ZV29 1317 aa23.85■■□□□ 1.41
PTPN11-207ENST00000639857 UBR3Q6ZT12 1888 aa23.85■■□□□ 1.41
PTPN11-207ENST00000639857 CFAP53Q96M91 514 aa23.85■■□□□ 1.41
PTPN11-207ENST00000639857 PTGER2P43116 358 aa23.84■■□□□ 1.41
PTPN11-207ENST00000639857 AKAP4Q5JQC9 854 aa23.83■■□□□ 1.41
PTPN11-207ENST00000639857 CICQ96RK0 1608 aaPredicted RBP23.83■■□□□ 1.41
PTPN11-207ENST00000639857 MRC1P22897 1456 aa23.82■■□□□ 1.4
PTPN11-207ENST00000639857 LOC102724428A0A0B4J2F2 783 aa23.82■■□□□ 1.4
PTPN11-207ENST00000639857 HMOX1P09601 288 aa23.82■■□□□ 1.4
PTPN11-207ENST00000639857 SIK1P57059 783 aa23.82■■□□□ 1.4
PTPN11-207ENST00000639857 CNGB1Q14028 1251 aaPredicted RBP23.82■■□□□ 1.4
PTPN11-207ENST00000639857 SGIP1Q9BQI5 828 aa23.82■■□□□ 1.4
PTPN11-207ENST00000639857 COL5A3P25940 1745 aaPredicted RBP23.81■■□□□ 1.4
PTPN11-207ENST00000639857 PPP2R1AP30153 589 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms