RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 NGDNQ8NEJ9 315 aaKnown RBP23.76■■□□□ 1.39
CROCCP2-206ENST00000639594 SLKQ9H2G2 1235 aaPredicted RBP23.76■■□□□ 1.39
CROCCP2-206ENST00000639594 ARHGEF10O15013 1369 aa23.75■■□□□ 1.39
CROCCP2-206ENST00000639594 HSPA2P54652 639 aa23.74■■□□□ 1.39
CROCCP2-206ENST00000639594 GSE1Q14687 1217 aa23.74■■□□□ 1.39
CROCCP2-206ENST00000639594 CRB1P82279 1406 aa23.73■■□□□ 1.39
CROCCP2-206ENST00000639594 SBNO1A3KN83 1393 aa23.73■■□□□ 1.39
CROCCP2-206ENST00000639594 ANTXR1Q9H6X2 564 aa23.73■■□□□ 1.39
CROCCP2-206ENST00000639594 KIF24Q5T7B8 1368 aa23.73■■□□□ 1.39
CROCCP2-206ENST00000639594 KIAA0232Q92628 1395 aa23.73■■□□□ 1.39
CROCCP2-206ENST00000639594 FLT4P35916 1363 aa23.72■■□□□ 1.39
CROCCP2-206ENST00000639594 MARF1Q9Y4F3 1742 aaKnown RBP23.71■■□□□ 1.39
CROCCP2-206ENST00000639594 RGS12O14924 1447 aa23.71■■□□□ 1.39
CROCCP2-206ENST00000639594 FOXO3O43524 673 aa23.71■■□□□ 1.39
CROCCP2-206ENST00000639594 MTHFSDQ2M296 383 aaKnown RBP23.71■■□□□ 1.39
CROCCP2-206ENST00000639594 INTS3Q68E01 1043 aaKnown RBP23.71■■□□□ 1.39
CROCCP2-206ENST00000639594 BMP2KLQ5H9B9 411 aa23.7■■□□□ 1.38
CROCCP2-206ENST00000639594 AMPHP49418 695 aa23.69■■□□□ 1.38
CROCCP2-206ENST00000639594 HAP1P54257 671 aaPredicted RBP23.69■■□□□ 1.38
CROCCP2-206ENST00000639594 MIS18AQ9NYP9 233 aa23.69■■□□□ 1.38
CROCCP2-206ENST00000639594 EYA1Q99502 592 aa23.68■■□□□ 1.38
CROCCP2-206ENST00000639594 KDRP35968 1356 aa23.67■■□□□ 1.38
CROCCP2-206ENST00000639594 NWD1Q149M9 1564 aa23.67■■□□□ 1.38
CROCCP2-206ENST00000639594 NLRP6P59044 892 aa23.66■■□□□ 1.38
CROCCP2-206ENST00000639594 IGSF1Q8N6C5 1336 aa23.66■■□□□ 1.38
CROCCP2-206ENST00000639594 SPRYD3Q8NCJ5 442 aa23.65■■□□□ 1.38
CROCCP2-206ENST00000639594 ANKARQ7Z5J8 1434 aa23.65■■□□□ 1.38
CROCCP2-206ENST00000639594 LMTK3Q96Q04 1460 aa23.65■■□□□ 1.38
CROCCP2-206ENST00000639594 RTF1Q92541 710 aaKnown RBP23.65■■□□□ 1.38
CROCCP2-206ENST00000639594 NUTM2GQ5VZR2 741 aa23.64■■□□□ 1.38
CROCCP2-206ENST00000639594 RBM25P49756 843 aaKnown RBP23.64■■□□□ 1.37
CROCCP2-206ENST00000639594 PTPRCP08575 1304 aa23.64■■□□□ 1.37
CROCCP2-206ENST00000639594 STRCP1A6NGW2 1772 aa23.64■■□□□ 1.37
CROCCP2-206ENST00000639594 USP54Q70EL1 1684 aa23.63■■□□□ 1.37
CROCCP2-206ENST00000639594 DCTPP1Q9H773 170 aa23.63■■□□□ 1.37
CROCCP2-206ENST00000639594 TSPYL4Q9UJ04 414 aa23.62■■□□□ 1.37
CROCCP2-206ENST00000639594 MSH6P52701 1360 aa23.62■■□□□ 1.37
CROCCP2-206ENST00000639594 ADGRL3Q9HAR2 1447 aa23.62■■□□□ 1.37
CROCCP2-206ENST00000639594 ATP10DQ9P241 1426 aa23.62■■□□□ 1.37
CROCCP2-206ENST00000639594 SLC4A2P04920 1241 aa23.62■■□□□ 1.37
CROCCP2-206ENST00000639594 ANKRD44Q8N8A2 993 aa23.61■■□□□ 1.37
CROCCP2-206ENST00000639594 GAS2L2Q8NHY3 880 aa23.61■■□□□ 1.37
CROCCP2-206ENST00000639594 HOXC9P31274 260 aa23.59■■□□□ 1.37
CROCCP2-206ENST00000639594 TBC1D9Q6ZT07 1266 aa23.59■■□□□ 1.37
CROCCP2-206ENST00000639594 STRCQ7RTU9 1775 aa23.59■■□□□ 1.37
CROCCP2-206ENST00000639594 LRRC37A3O60309 1634 aa23.59■■□□□ 1.37
CROCCP2-206ENST00000639594 RTL1A6NKG5 1358 aa23.59■■□□□ 1.37
CROCCP2-206ENST00000639594 CEP85Q6P2H3 762 aa23.58■■□□□ 1.37
CROCCP2-206ENST00000639594 G2E3Q7L622 706 aa23.58■■□□□ 1.37
CROCCP2-206ENST00000639594 PLEKHM2Q8IWE5 1019 aa23.58■■□□□ 1.37
CROCCP2-206ENST00000639594 MEIS3Q99687 375 aa23.58■■□□□ 1.37
CROCCP2-206ENST00000639594 RPAP2Q8IXW5 612 aaPredicted RBP23.58■■□□□ 1.36
CROCCP2-206ENST00000639594 LTN1O94822 1766 aa23.57■■□□□ 1.36
CROCCP2-206ENST00000639594 HSCBQ8IWL3 235 aa23.57■■□□□ 1.36
CROCCP2-206ENST00000639594 ABTB2Q8N961 1025 aa23.57■■□□□ 1.36
CROCCP2-206ENST00000639594 GSPT1P15170 499 aaKnown RBP23.56■■□□□ 1.36
CROCCP2-206ENST00000639594 C14orf37Q86TY3 774 aa23.56■■□□□ 1.36
CROCCP2-206ENST00000639594 PROSER2Q86WR7 435 aaPredicted RBP23.56■■□□□ 1.36
CROCCP2-206ENST00000639594 C16orf71Q8IYS4 520 aaPredicted RBP23.55■■□□□ 1.36
CROCCP2-206ENST00000639594 CACNA1FO60840 1977 aa23.55■■□□□ 1.36
CROCCP2-206ENST00000639594 HTATSF1O43719 755 aaKnown RBP23.54■■□□□ 1.36
CROCCP2-206ENST00000639594 FAM208AQ9UK61 1670 aaKnown RBP23.54■■□□□ 1.36
CROCCP2-206ENST00000639594 GNAT3A8MTJ3 354 aa23.54■■□□□ 1.36
CROCCP2-206ENST00000639594 F6X3S4 739 aa23.54■■□□□ 1.36
CROCCP2-206ENST00000639594 LTV1Q96GA3 475 aaPredicted RBP23.54■■□□□ 1.36
CROCCP2-206ENST00000639594 KIF2CQ99661 725 aa23.54■■□□□ 1.36
CROCCP2-206ENST00000639594 SNX21Q969T3 373 aa23.53■■□□□ 1.36
CROCCP2-206ENST00000639594 CDC45O75419 566 aa23.52■■□□□ 1.36
CROCCP2-206ENST00000639594 CHMP5Q9NZZ3 219 aa23.52■■□□□ 1.36
CROCCP2-206ENST00000639594 SLC4A10Q6U841 1118 aa23.52■■□□□ 1.36
CROCCP2-206ENST00000639594 TTC22Q5TAA0 569 aa23.51■■□□□ 1.35
CROCCP2-206ENST00000639594 OTUD7AQ8TE49 926 aaPredicted RBP23.5■■□□□ 1.35
CROCCP2-206ENST00000639594 PHF8Q9UPP1 1060 aa23.5■■□□□ 1.35
CROCCP2-206ENST00000639594 NCOA3Q9Y6Q9 1424 aa23.5■■□□□ 1.35
CROCCP2-206ENST00000639594 SMARCA5O60264 1052 aaPredicted RBP23.5■■□□□ 1.35
CROCCP2-206ENST00000639594 IL17REQ8NFR9 667 aa23.49■■□□□ 1.35
CROCCP2-206ENST00000639594 APBB1O00213 710 aa23.48■■□□□ 1.35
CROCCP2-206ENST00000639594 CCT4P50991 539 aaKnown RBP23.48■■□□□ 1.35
CROCCP2-206ENST00000639594 MAP3K5Q99683 1374 aa23.48■■□□□ 1.35
CROCCP2-206ENST00000639594 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
CROCCP2-206ENST00000639594 USHBP1Q8N6Y0 703 aa23.48■■□□□ 1.35
CROCCP2-206ENST00000639594 IL27Q8NEV9 243 aa23.48■■□□□ 1.35
CROCCP2-206ENST00000639594 STK31Q9BXU1 1019 aa23.48■■□□□ 1.35
CROCCP2-206ENST00000639594 TMEM94Q12767 1356 aa23.47■■□□□ 1.35
CROCCP2-206ENST00000639594 RGPD2P0DJD1 1756 aa23.47■■□□□ 1.35
CROCCP2-206ENST00000639594 NECTIN2Q92692 538 aa23.47■■□□□ 1.35
CROCCP2-206ENST00000639594 ORAI2Q96SN7 254 aa23.46■■□□□ 1.35
CROCCP2-206ENST00000639594 CCDC30Q5VVM6 783 aa23.45■■□□□ 1.35
CROCCP2-206ENST00000639594 MCM4P33991 863 aa23.45■■□□□ 1.34
CROCCP2-206ENST00000639594 DDIT3P35638 169 aa23.45■■□□□ 1.34
CROCCP2-206ENST00000639594 CD2BP2O95400 341 aaKnown RBP23.44■■□□□ 1.34
CROCCP2-206ENST00000639594 FLIIQ13045 1269 aa23.44■■□□□ 1.34
CROCCP2-206ENST00000639594 TAF7Q15545 349 aaPredicted RBP23.44■■□□□ 1.34
CROCCP2-206ENST00000639594 RBM42Q9BTD8 480 aaKnown RBP23.44■■□□□ 1.34
CROCCP2-206ENST00000639594 N4BP2Q86UW6 1770 aaPredicted RBP23.44■■□□□ 1.34
CROCCP2-206ENST00000639594 XIRP1Q702N8 1843 aaKnown RBP23.44■■□□□ 1.34
CROCCP2-206ENST00000639594 C19orf44Q9H6X5 657 aa23.44■■□□□ 1.34
CROCCP2-206ENST00000639594 NFAT5O94916 1531 aa23.43■■□□□ 1.34
CROCCP2-206ENST00000639594 HMMRO75330 724 aa23.43■■□□□ 1.34
CROCCP2-206ENST00000639594 HSP90AB1P08238 724 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms