RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 CFAP44Q96MT7 982 aa13.98□□□□□ -0.17
PAX6-257ENST00000639409 USP54Q70EL1 1684 aa13.98□□□□□ -0.17
PAX6-257ENST00000639409 NLRP6P59044 892 aa13.98□□□□□ -0.17
PAX6-257ENST00000639409 LMOD3Q0VAK6 560 aa13.98□□□□□ -0.17
PAX6-257ENST00000639409 C8orf58Q8NAV2 365 aa13.98□□□□□ -0.17
PAX6-257ENST00000639409 MCM10Q7L590 875 aa13.97□□□□□ -0.17
PAX6-257ENST00000639409 ARHGEF10O15013 1369 aa13.96□□□□□ -0.17
PAX6-257ENST00000639409 DDX19BQ9UMR2 479 aa13.96□□□□□ -0.17
PAX6-257ENST00000639409 FOXO3O43524 673 aa13.96□□□□□ -0.18
PAX6-257ENST00000639409 TWISTNBQ3B726 338 aaPredicted RBP13.96□□□□□ -0.18
PAX6-257ENST00000639409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.96□□□□□ -0.18
PAX6-257ENST00000639409 AMPHP49418 695 aa13.95□□□□□ -0.18
PAX6-257ENST00000639409 KRT24Q2M2I5 525 aa13.95□□□□□ -0.18
PAX6-257ENST00000639409 MRPL50Q8N5N7 158 aaKnown RBP13.95□□□□□ -0.18
PAX6-257ENST00000639409 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
PAX6-257ENST00000639409 LTN1O94822 1766 aa13.95□□□□□ -0.18
PAX6-257ENST00000639409 IGSF3O75054 1194 aa13.95□□□□□ -0.18
PAX6-257ENST00000639409 PDZRN3Q9UPQ7 1066 aa13.95□□□□□ -0.18
PAX6-257ENST00000639409 KDRP35968 1356 aa13.94□□□□□ -0.18
PAX6-257ENST00000639409 NPHP4O75161 1426 aaPredicted RBP13.94□□□□□ -0.18
PAX6-257ENST00000639409 ADGRL3Q9HAR2 1447 aa13.94□□□□□ -0.18
PAX6-257ENST00000639409 BRPF1P55201 1214 aaPredicted RBP13.94□□□□□ -0.18
PAX6-257ENST00000639409 ZNF428Q96B54 188 aa13.94□□□□□ -0.18
PAX6-257ENST00000639409 EYA1Q99502 592 aa13.94□□□□□ -0.18
PAX6-257ENST00000639409 NWD1Q149M9 1564 aa13.94□□□□□ -0.18
PAX6-257ENST00000639409 IPO8O15397 1037 aaKnown RBP13.93□□□□□ -0.18
PAX6-257ENST00000639409 RWDD1Q9H446 243 aaPredicted RBP13.93□□□□□ -0.18
PAX6-257ENST00000639409 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
PAX6-257ENST00000639409 PHF8Q9UPP1 1060 aa13.93□□□□□ -0.18
PAX6-257ENST00000639409 IGSF1Q8N6C5 1336 aa13.93□□□□□ -0.18
PAX6-257ENST00000639409 MTHFSDQ2M296 383 aaKnown RBP13.93□□□□□ -0.18
PAX6-257ENST00000639409 ZBTB40Q9NUA8 1239 aa13.93□□□□□ -0.18
PAX6-257ENST00000639409 HOXC9P31274 260 aa13.92□□□□□ -0.18
PAX6-257ENST00000639409 CRB1P82279 1406 aa13.92□□□□□ -0.18
PAX6-257ENST00000639409 CHL1O00533 1208 aa13.9□□□□□ -0.18
PAX6-257ENST00000639409 ESCO1Q5FWF5 840 aa13.9□□□□□ -0.18
PAX6-257ENST00000639409 HDAC1Q13547 482 aaPredicted RBP13.9□□□□□ -0.18
PAX6-257ENST00000639409 VSIG10Q8N0Z9 540 aa13.9□□□□□ -0.18
PAX6-257ENST00000639409 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
PAX6-257ENST00000639409 ABCC4O15439 1325 aa13.89□□□□□ -0.19
PAX6-257ENST00000639409 NFAT5O94916 1531 aa13.89□□□□□ -0.19
PAX6-257ENST00000639409 SEC24BO95487 1268 aa13.89□□□□□ -0.19
PAX6-257ENST00000639409 LTV1Q96GA3 475 aaPredicted RBP13.89□□□□□ -0.19
PAX6-257ENST00000639409 C1orf115Q9H7X2 142 aa13.89□□□□□ -0.19
PAX6-257ENST00000639409 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
PAX6-257ENST00000639409 LRRC37A3O60309 1634 aa13.88□□□□□ -0.19
PAX6-257ENST00000639409 ARHGAP45Q92619 1136 aa13.88□□□□□ -0.19
PAX6-257ENST00000639409 ZBTB7BO15156 539 aaPredicted RBP13.88□□□□□ -0.19
PAX6-257ENST00000639409 ORAI2Q96SN7 254 aa13.88□□□□□ -0.19
PAX6-257ENST00000639409 XPCQ01831 940 aaPredicted RBP13.87□□□□□ -0.19
PAX6-257ENST00000639409 USHBP1Q8N6Y0 703 aa13.87□□□□□ -0.19
PAX6-257ENST00000639409 NAP1L2Q9ULW6 460 aaPredicted RBP13.87□□□□□ -0.19
PAX6-257ENST00000639409 KIF24Q5T7B8 1368 aa13.87□□□□□ -0.19
PAX6-257ENST00000639409 USP19O94966 1318 aa13.87□□□□□ -0.19
PAX6-257ENST00000639409 RGS12O14924 1447 aa13.87□□□□□ -0.19
PAX6-257ENST00000639409 RGPD2P0DJD1 1756 aa13.87□□□□□ -0.19
PAX6-257ENST00000639409 SMC5Q8IY18 1101 aa13.86□□□□□ -0.19
PAX6-257ENST00000639409 KIAA0232Q92628 1395 aa13.85□□□□□ -0.19
PAX6-257ENST00000639409 PSME1Q06323 249 aa13.85□□□□□ -0.19
PAX6-257ENST00000639409 SLC4A3P48751 1232 aa13.85□□□□□ -0.19
PAX6-257ENST00000639409 NBR1Q14596 966 aa13.85□□□□□ -0.19
PAX6-257ENST00000639409 RTL1A6NKG5 1358 aa13.84□□□□□ -0.19
PAX6-257ENST00000639409 RTF1Q92541 710 aaKnown RBP13.84□□□□□ -0.19
PAX6-257ENST00000639409 MSH6P52701 1360 aa13.84□□□□□ -0.19
PAX6-257ENST00000639409 GAS2L2Q8NHY3 880 aa13.84□□□□□ -0.19
PAX6-257ENST00000639409 TSPYL4Q9UJ04 414 aa13.84□□□□□ -0.19
PAX6-257ENST00000639409 ZBTB7CA1YPR0 619 aa13.83□□□□□ -0.2
PAX6-257ENST00000639409 TRPM3Q9HCF6 1732 aaPredicted RBP13.83□□□□□ -0.2
PAX6-257ENST00000639409 SIRT2Q8IXJ6 389 aa13.83□□□□□ -0.2
PAX6-257ENST00000639409 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
PAX6-257ENST00000639409 STRCP1A6NGW2 1772 aa13.82□□□□□ -0.2
PAX6-257ENST00000639409 PHRF1Q9P1Y6 1649 aaKnown RBP13.82□□□□□ -0.2
PAX6-257ENST00000639409 DDRGK1Q96HY6 314 aa13.82□□□□□ -0.2
PAX6-257ENST00000639409 API5Q9BZZ5 524 aaKnown RBP13.82□□□□□ -0.2
PAX6-257ENST00000639409 NBPF6Q5VWK0 638 aa13.81□□□□□ -0.2
PAX6-257ENST00000639409 IP6K1Q92551 441 aa13.81□□□□□ -0.2
PAX6-257ENST00000639409 NBPF4Q96M43 638 aa13.81□□□□□ -0.2
PAX6-257ENST00000639409 LNPKQ9C0E8 428 aa13.81□□□□□ -0.2
PAX6-257ENST00000639409 FAM208AQ9UK61 1670 aaKnown RBP13.81□□□□□ -0.2
PAX6-257ENST00000639409 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
PAX6-257ENST00000639409 MAP3K5Q99683 1374 aa13.81□□□□□ -0.2
PAX6-257ENST00000639409 NUCB1Q02818 461 aa13.8□□□□□ -0.2
PAX6-257ENST00000639409 PROSER2Q86WR7 435 aaPredicted RBP13.8□□□□□ -0.2
PAX6-257ENST00000639409 IL17REQ8NFR9 667 aa13.8□□□□□ -0.2
PAX6-257ENST00000639409 LRRC59Q96AG4 307 aaKnown RBP13.8□□□□□ -0.2
PAX6-257ENST00000639409 SLIT3O75094 1523 aa13.8□□□□□ -0.2
PAX6-257ENST00000639409 C1orf167Q5SNV9 1468 aa13.8□□□□□ -0.2
PAX6-257ENST00000639409 SLC4A2P04920 1241 aa13.79□□□□□ -0.2
PAX6-257ENST00000639409 G2E3Q7L622 706 aa13.79□□□□□ -0.2
PAX6-257ENST00000639409 IPO4Q8TEX9 1081 aaKnown RBP13.79□□□□□ -0.2
PAX6-257ENST00000639409 LMOD2Q6P5Q4 547 aa13.79□□□□□ -0.2
PAX6-257ENST00000639409 ATP10DQ9P241 1426 aa13.78□□□□□ -0.2
PAX6-257ENST00000639409 INTS3Q68E01 1043 aaKnown RBP13.78□□□□□ -0.2
PAX6-257ENST00000639409 CHD1LQ86WJ1 897 aa13.78□□□□□ -0.2
PAX6-257ENST00000639409 TICAM2Q86XR7 235 aa13.78□□□□□ -0.2
PAX6-257ENST00000639409 TEX2Q8IWB9 1127 aa13.78□□□□□ -0.2
PAX6-257ENST00000639409 KCNH5Q8NCM2 988 aa13.78□□□□□ -0.2
PAX6-257ENST00000639409 KIF1AQ12756 1690 aa13.78□□□□□ -0.2
PAX6-257ENST00000639409 GCP02774 474 aa13.78□□□□□ -0.2
PAX6-257ENST00000639409 RGPD5Q99666 1765 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms