RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	EIF3J	O75822	258 aa	Known RBP	13.16	□□□□□ -0.3
PAX6-256	ENST00000639394	IRX1	P78414	480 aa	Predicted RBP	13.16	□□□□□ -0.3
PAX6-256	ENST00000639394	JAKMIP3	Q5VZ66	844 aa		13.16	□□□□□ -0.3
PAX6-256	ENST00000639394	KRT222	Q8N1A0	295 aa		13.16	□□□□□ -0.3
PAX6-256	ENST00000639394	CCDC97	Q96F63	343 aa	Predicted RBP	13.16	□□□□□ -0.3
PAX6-256	ENST00000639394	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.16	□□□□□ -0.3
PAX6-256	ENST00000639394	ANKRD30B	Q9BXX2	1392 aa		13.15	□□□□□ -0.3
PAX6-256	ENST00000639394	C8orf34	Q49A92	452 aa		13.15	□□□□□ -0.3
PAX6-256	ENST00000639394	FAM184A	Q8NB25	1140 aa		13.15	□□□□□ -0.3
PAX6-256	ENST00000639394	BCL2L12	Q9HB09	334 aa		13.15	□□□□□ -0.3
PAX6-256	ENST00000639394	RPS6KL1	Q9Y6S9	549 aa		13.15	□□□□□ -0.3
PAX6-256	ENST00000639394	BCORL1	Q5H9F3	1711 aa		13.15	□□□□□ -0.31
PAX6-256	ENST00000639394	SETSIP	P0DME0	302 aa		13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	CD151	P48509	253 aa		13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	PKD2	Q13563	968 aa		13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	C1QTNF12	Q5T7M4	302 aa		13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	CWC15	Q9P013	229 aa	Known RBP	13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	MROH1	Q8NDA8	1641 aa		13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	KIF3B	O15066	747 aa		13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	SCP2	P22307	547 aa		13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	U2AF2	P26368	475 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	RRP1	P56182	461 aa	Known RBP	13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	RABEP1	Q15276	862 aa		13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	DNAJC21	Q5F1R6	531 aa	Known RBP	13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	DDX46	Q7L014	1031 aa	Known RBP	13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	TNPO1	Q92973	898 aa	Known RBP	13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	PRDM15	P57071	1507 aa	Predicted RBP	13.14	□□□□□ -0.31
PAX6-256	ENST00000639394	RNF17	Q9BXT8	1623 aa	Known RBP	13.13	□□□□□ -0.31
PAX6-256	ENST00000639394	VWDE	Q8N2E2	1590 aa		13.13	□□□□□ -0.31
PAX6-256	ENST00000639394	ANKRD18B	A2A2Z9	1011 aa		13.13	□□□□□ -0.31
PAX6-256	ENST00000639394	ERCC3	P19447	782 aa		13.13	□□□□□ -0.31
PAX6-256	ENST00000639394	CYP2C19	P33261	490 aa		13.13	□□□□□ -0.31
PAX6-256	ENST00000639394	CEP89	Q96ST8	783 aa		13.13	□□□□□ -0.31
PAX6-256	ENST00000639394	KDM2A	Q9Y2K7	1162 aa		13.13	□□□□□ -0.31
PAX6-256	ENST00000639394	HNRNPH2	P55795	449 aa	Known RBP	13.12	□□□□□ -0.31
PAX6-256	ENST00000639394	ZSCAN26	Q16670	478 aa		13.12	□□□□□ -0.31
PAX6-256	ENST00000639394	KANK1	Q14678	1352 aa		13.12	□□□□□ -0.31
PAX6-256	ENST00000639394	KLHL23	Q8NBE8	558 aa		13.12	□□□□□ -0.31
PAX6-256	ENST00000639394	ATP10A	O60312	1499 aa		13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	RERE	Q9P2R6	1566 aa		13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	CCP110	O43303	1012 aa		13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	MAP9	Q49MG5	647 aa		13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	PAX7	P23759	505 aa		13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	MAP2K2	P36507	400 aa		13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	TXLNB	Q8N3L3	684 aa		13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	ANKRD20A12P	Q8NF67	263 aa		13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	NECTIN2	Q92692	538 aa		13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	SLK	Q9H2G2	1235 aa	Predicted RBP	13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	KDM4C	Q9H3R0	1056 aa		13.11	□□□□□ -0.31
PAX6-256	ENST00000639394	ARHGEF40	Q8TER5	1519 aa		13.1	□□□□□ -0.31
PAX6-256	ENST00000639394	GOLGA6C	A6NDK9	693 aa		13.1	□□□□□ -0.31
PAX6-256	ENST00000639394	GOLGA6B	A6NDN3	693 aa		13.1	□□□□□ -0.31
PAX6-256	ENST00000639394	CTIF	O43310	598 aa	Known RBP	13.1	□□□□□ -0.31
PAX6-256	ENST00000639394	GOLGA6D	P0CG33	693 aa		13.1	□□□□□ -0.31
PAX6-256	ENST00000639394	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.1	□□□□□ -0.31
PAX6-256	ENST00000639394	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.1	□□□□□ -0.31
PAX6-256	ENST00000639394	GAS2L3	Q86XJ1	694 aa		13.1	□□□□□ -0.31
PAX6-256	ENST00000639394	GOLGA6A	Q9NYA3	693 aa		13.1	□□□□□ -0.31
PAX6-256	ENST00000639394	CTNNA3	Q9UI47	895 aa		13.1	□□□□□ -0.31
PAX6-256	ENST00000639394	CT47B1	P0C2W7	299 aa	Predicted RBP	13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	PPP2R5A	Q15172	486 aa		13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	CDC37	Q16543	378 aa	Predicted RBP	13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	NPC1L1	Q9UHC9	1359 aa		13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	TTC31	Q49AM3	519 aa	Predicted RBP	13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	HDGFL1	Q5TGJ6	251 aa		13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	MCTP2	Q6DN12	878 aa		13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	EXOC6	Q8TAG9	804 aa		13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	GBP4	Q96PP9	640 aa		13.09	□□□□□ -0.31
PAX6-256	ENST00000639394	VIRMA	Q69YN4	1812 aa	Known RBP	13.08	□□□□□ -0.32
PAX6-256	ENST00000639394	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
PAX6-256	ENST00000639394	LMTK2	Q8IWU2	1503 aa		13.08	□□□□□ -0.32
PAX6-256	ENST00000639394	TET3	O43151	1660 aa		13.08	□□□□□ -0.32
PAX6-256	ENST00000639394	RPRD2	Q5VT52	1461 aa	Known RBP	13.07	□□□□□ -0.32
PAX6-256	ENST00000639394	AGL	P35573	1532 aa		13.07	□□□□□ -0.32
PAX6-256	ENST00000639394	ABCD1	P33897	745 aa		13.07	□□□□□ -0.32
PAX6-256	ENST00000639394	DRC1	Q96MC2	740 aa		13.07	□□□□□ -0.32
PAX6-256	ENST00000639394	LARP6	Q9BRS8	491 aa	Known RBP	13.07	□□□□□ -0.32
PAX6-256	ENST00000639394	TOMM22	Q9NS69	142 aa		13.07	□□□□□ -0.32
PAX6-256	ENST00000639394	MYO1C	O00159	1063 aa		13.06	□□□□□ -0.32
PAX6-256	ENST00000639394	TNNT1	P13805	278 aa		13.06	□□□□□ -0.32
PAX6-256	ENST00000639394	MAGEA8	P43361	318 aa		13.06	□□□□□ -0.32
PAX6-256	ENST00000639394	TRAF1	Q13077	416 aa		13.06	□□□□□ -0.32
PAX6-256	ENST00000639394	CEP126	Q9P2H0	1117 aa		13.06	□□□□□ -0.32
PAX6-256	ENST00000639394		E9PCH4	1651 aa		13.06	□□□□□ -0.32
PAX6-256	ENST00000639394	ETAA1	Q9NY74	926 aa		13.05	□□□□□ -0.32
PAX6-256	ENST00000639394	FAM53C	Q9NYF3	392 aa		13.05	□□□□□ -0.32
PAX6-256	ENST00000639394	PLA2R1	Q13018	1463 aa		13.05	□□□□□ -0.32
PAX6-256	ENST00000639394	TONSL	Q96HA7	1378 aa		13.05	□□□□□ -0.32
PAX6-256	ENST00000639394	ZNF445	P59923	1031 aa		13.05	□□□□□ -0.32
PAX6-256	ENST00000639394	GGT6	Q6P531	493 aa		13.05	□□□□□ -0.32
PAX6-256	ENST00000639394	SIGLEC1	Q9BZZ2	1709 aa		13.04	□□□□□ -0.32
PAX6-256	ENST00000639394	ERICH4	A6NGS2	130 aa		13.04	□□□□□ -0.32
PAX6-256	ENST00000639394	SRPK2	P78362	688 aa	Known RBP	13.04	□□□□□ -0.32
PAX6-256	ENST00000639394	CCT2	P78371	535 aa	Known RBP	13.04	□□□□□ -0.32
PAX6-256	ENST00000639394	PIBF1	Q8WXW3	757 aa		13.04	□□□□□ -0.32
PAX6-256	ENST00000639394	RANBP17	Q9H2T7	1088 aa	Known RBP	13.04	□□□□□ -0.32
PAX6-256	ENST00000639394	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.04	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms