RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 APBA3O96018 575 aa24.4■■□□□ 1.5
SPIN3-220ENST00000639257 PTF1AQ7RTS3 328 aa24.4■■□□□ 1.5
SPIN3-220ENST00000639257 EYA1Q99502 592 aa24.4■■□□□ 1.5
SPIN3-220ENST00000639257 ZCRB1Q8TBF4 217 aaKnown RBP24.39■■□□□ 1.49
SPIN3-220ENST00000639257 PLSCR1O15162 318 aa24.38■■□□□ 1.49
SPIN3-220ENST00000639257 EZH2Q15910 746 aaKnown RBP24.38■■□□□ 1.49
SPIN3-220ENST00000639257 IGSF1Q8N6C5 1336 aa24.37■■□□□ 1.49
SPIN3-220ENST00000639257 RAPGEF4Q8WZA2 1011 aa24.37■■□□□ 1.49
SPIN3-220ENST00000639257 NUP188Q5SRE5 1749 aa24.36■■□□□ 1.49
SPIN3-220ENST00000639257 TATP17735 454 aaPredicted RBP24.35■■□□□ 1.49
SPIN3-220ENST00000639257 KCNQ2O43526 872 aa24.34■■□□□ 1.49
SPIN3-220ENST00000639257 CC2D1BQ5T0F9 858 aaKnown RBP24.34■■□□□ 1.49
SPIN3-220ENST00000639257 DDX54Q8TDD1 881 aaKnown RBP24.32■■□□□ 1.48
SPIN3-220ENST00000639257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.32■■□□□ 1.481e-6■□□□□ 10.8
SPIN3-220ENST00000639257 KDRP35968 1356 aa24.31■■□□□ 1.48
SPIN3-220ENST00000639257 BTAF1O14981 1849 aa24.31■■□□□ 1.48
SPIN3-220ENST00000639257 IL13P35225 146 aa24.31■■□□□ 1.48
SPIN3-220ENST00000639257 MTHFSP49914 203 aa24.31■■□□□ 1.48
SPIN3-220ENST00000639257 DOT1LQ8TEK3 1739 aa24.31■■□□□ 1.48
SPIN3-220ENST00000639257 PCDH11XQ9BZA7 1347 aa24.31■■□□□ 1.48
SPIN3-220ENST00000639257 PCDH11YQ9BZA8 1340 aa24.31■■□□□ 1.48
SPIN3-220ENST00000639257 COL3A1P02461 1466 aaPredicted RBP24.3■■□□□ 1.48
SPIN3-220ENST00000639257 CYP27B1O15528 508 aa24.29■■□□□ 1.48
SPIN3-220ENST00000639257 PROM2Q8N271 834 aa24.29■■□□□ 1.48
SPIN3-220ENST00000639257 ACSBG1Q96GR2 724 aa24.28■■□□□ 1.48
SPIN3-220ENST00000639257 NKX1-1Q15270 411 aaPredicted RBP24.26■■□□□ 1.47
SPIN3-220ENST00000639257 TOGARAM1Q9Y4F4 1720 aa24.26■■□□□ 1.47
SPIN3-220ENST00000639257 ZEB1P37275 1124 aaPredicted RBP24.25■■□□□ 1.47
SPIN3-220ENST00000639257 SPG7Q9UQ90 795 aa24.23■■□□□ 1.47
SPIN3-220ENST00000639257 PAPPAQ13219 1627 aa24.22■■□□□ 1.47
SPIN3-220ENST00000639257 PRIM1P49642 420 aaKnown RBP24.22■■□□□ 1.47
SPIN3-220ENST00000639257 TXNRD1Q16881 649 aa24.22■■□□□ 1.47
SPIN3-220ENST00000639257 AEBP1Q8IUX7 1158 aa24.22■■□□□ 1.47
SPIN3-220ENST00000639257 KAT6BQ8WYB5 2073 aa24.21■■□□□ 1.47
SPIN3-220ENST00000639257 LY75O60449 1722 aa24.21■■□□□ 1.47
SPIN3-220ENST00000639257 PHKG2P15735 406 aa24.19■■□□□ 1.46
SPIN3-220ENST00000639257 DIAPH1O60610 1272 aaKnown RBP24.18■■□□□ 1.46
SPIN3-220ENST00000639257 ITGB4P16144 1822 aa24.18■■□□□ 1.46
SPIN3-220ENST00000639257 SULT6B1Q6IMI4 303 aa24.17■■□□□ 1.46
SPIN3-220ENST00000639257 IFNL2Q8IZJ0 200 aa24.17■■□□□ 1.46
SPIN3-220ENST00000639257 PSDA5PKW4 1024 aaPredicted RBP24.16■■□□□ 1.46
SPIN3-220ENST00000639257 PPP2R1AP30153 589 aa24.16■■□□□ 1.46
SPIN3-220ENST00000639257 R3HDM1Q15032 1099 aaKnown RBP24.16■■□□□ 1.46
SPIN3-220ENST00000639257 AMOTQ4VCS5 1084 aa24.16■■□□□ 1.46
SPIN3-220ENST00000639257 ANO8Q9HCE9 1232 aaPredicted RBP24.16■■□□□ 1.46
SPIN3-220ENST00000639257 SRCAPQ6ZRS2 3230 aa24.16■■□□□ 1.46
SPIN3-220ENST00000639257 LRP5O75197 1615 aa24.15■■□□□ 1.46
SPIN3-220ENST00000639257 NBPF14Q5TI25 921 aa24.15■■□□□ 1.46
SPIN3-220ENST00000639257 PLEKHO1Q53GL0 409 aaPredicted RBP24.14■■□□□ 1.45
SPIN3-220ENST00000639257 SYTL4Q96C24 671 aaPredicted RBP24.13■■□□□ 1.45
SPIN3-220ENST00000639257 LRRC4BQ9NT99 713 aa24.13■■□□□ 1.45
SPIN3-220ENST00000639257 SLC27A3Q5K4L6 730 aa24.12■■□□□ 1.45
SPIN3-220ENST00000639257 KDM6AO15550 1401 aaPredicted RBP24.11■■□□□ 1.45
SPIN3-220ENST00000639257 CNGB1Q14028 1251 aaPredicted RBP24.11■■□□□ 1.45
SPIN3-220ENST00000639257 CASZ1Q86V15 1759 aa24.11■■□□□ 1.45
SPIN3-220ENST00000639257 HSP90AB1P08238 724 aaKnown RBP24.08■■□□□ 1.45
SPIN3-220ENST00000639257 ZNF530Q6P9A1 599 aaPredicted RBP24.08■■□□□ 1.45
SPIN3-220ENST00000639257 PIGBQ92521 554 aa24.08■■□□□ 1.45
SPIN3-220ENST00000639257 DCAF5Q96JK2 942 aa24.08■■□□□ 1.45
SPIN3-220ENST00000639257 ADAMTS7Q9UKP4 1686 aa24.08■■□□□ 1.44
SPIN3-220ENST00000639257 HMOX1P09601 288 aa24.07■■□□□ 1.44
SPIN3-220ENST00000639257 DDX10Q13206 875 aaKnown RBP24.07■■□□□ 1.44
SPIN3-220ENST00000639257 SLC15A2Q16348 729 aa24.07■■□□□ 1.44
SPIN3-220ENST00000639257 MPRIPQ6WCQ1 1025 aa24.07■■□□□ 1.44
SPIN3-220ENST00000639257 ERVV-2B6SEH9 535 aa24.06■■□□□ 1.44
SPIN3-220ENST00000639257 CFAP53Q96M91 514 aa24.06■■□□□ 1.44
SPIN3-220ENST00000639257 QSER1Q2KHR3 1735 aa24.06■■□□□ 1.44
SPIN3-220ENST00000639257 PALLDQ8WX93 1383 aa24.05■■□□□ 1.44
SPIN3-220ENST00000639257 SCN11AQ9UI33 1791 aa24.05■■□□□ 1.44
SPIN3-220ENST00000639257 AKT1S1Q96B36 256 aa24.04■■□□□ 1.44
SPIN3-220ENST00000639257 ZNF827Q17R98 1081 aa24.03■■□□□ 1.44
SPIN3-220ENST00000639257 SMARCC1Q92922 1105 aaPredicted RBP24.03■■□□□ 1.44
SPIN3-220ENST00000639257 STK32BQ9NY57 414 aa24.03■■□□□ 1.44
SPIN3-220ENST00000639257 MRC1P22897 1456 aa24.02■■□□□ 1.44
SPIN3-220ENST00000639257 RALBP1Q15311 655 aa24.02■■□□□ 1.44
SPIN3-220ENST00000639257 AKAP4Q5JQC9 854 aa24.02■■□□□ 1.44
SPIN3-220ENST00000639257 TMOD3Q9NYL9 352 aa24.02■■□□□ 1.44
SPIN3-220ENST00000639257 TAF1LQ8IZX4 1826 aa24.02■■□□□ 1.44
SPIN3-220ENST00000639257 MTHFSDQ2M296 383 aaKnown RBP24.01■■□□□ 1.43
SPIN3-220ENST00000639257 RSPH6AQ9H0K4 717 aa24.01■■□□□ 1.43
SPIN3-220ENST00000639257 CCNL1Q9UK58 526 aaPredicted RBP24.01■■□□□ 1.43
SPIN3-220ENST00000639257 C5P01031 1676 aa24.01■■□□□ 1.43
SPIN3-220ENST00000639257 ZNF831Q5JPB2 1677 aa24.01■■□□□ 1.43
SPIN3-220ENST00000639257 U2SURPO15042 1029 aaKnown RBP24■■□□□ 1.43
SPIN3-220ENST00000639257 C1orf141Q5JVX7 400 aa24■■□□□ 1.43
SPIN3-220ENST00000639257 TUBGCP6Q96RT7 1819 aa23.99■■□□□ 1.43
SPIN3-220ENST00000639257 KCNQ4P56696 695 aa23.99■■□□□ 1.43
SPIN3-220ENST00000639257 PDGFDQ9GZP0 370 aaPredicted RBP23.99■■□□□ 1.43
SPIN3-220ENST00000639257 NUDCQ9Y266 331 aa23.99■■□□□ 1.43
SPIN3-220ENST00000639257 ATG3Q9NT62 314 aa23.98■■□□□ 1.43
SPIN3-220ENST00000639257 ASAP1Q9ULH1 1129 aa23.98■■□□□ 1.43
SPIN3-220ENST00000639257 VIRMAQ69YN4 1812 aaKnown RBP23.97■■□□□ 1.43
SPIN3-220ENST00000639257 FCHSD2O94868 740 aa23.95■■□□□ 1.42
SPIN3-220ENST00000639257 HMGB2P26583 209 aaKnown RBP23.95■■□□□ 1.42
SPIN3-220ENST00000639257 CICQ96RK0 1608 aaPredicted RBP23.95■■□□□ 1.42
SPIN3-220ENST00000639257 LOC102724428A0A0B4J2F2 783 aa23.94■■□□□ 1.42
SPIN3-220ENST00000639257 PRKAR2BP31323 418 aa23.94■■□□□ 1.42
SPIN3-220ENST00000639257 SIK1P57059 783 aa23.94■■□□□ 1.42
SPIN3-220ENST00000639257 C4BP0C0L5 1744 aa23.93■■□□□ 1.42
SPIN3-220ENST00000639257 COL24A1Q17RW2 1714 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms