RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 CAMTA1Q9Y6Y1 1673 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 CD44P16070 742 aaKnown RBP3.95□□□□□ -1.78
NEK1-209ENST00000638824 NEUROD2Q15784 382 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 SPATA31A6Q5VVP1 1343 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.95□□□□□ -1.78
NEK1-209ENST00000638824 WNK3Q9BYP7 1800 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 MORC1Q86VD1 984 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 C8orf37Q96NL8 207 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 EMILIN1Q9Y6C2 1016 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 MAP3K19Q56UN5 1328 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 PARD3Q8TEW0 1356 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 PPM1GO15355 546 aaPredicted RBP3.95□□□□□ -1.78
NEK1-209ENST00000638824 BRD2P25440 801 aaKnown RBP3.95□□□□□ -1.78
NEK1-209ENST00000638824 MEX3CQ5U5Q3 659 aaKnown RBP3.95□□□□□ -1.78
NEK1-209ENST00000638824 KCTD17Q8N5Z5 321 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 SGIP1Q9BQI5 828 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 PRDM11Q9NQV5 511 aa3.95□□□□□ -1.78
NEK1-209ENST00000638824 CPDO75976 1380 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 NPC1L1Q9UHC9 1359 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 FAM83GA6ND36 823 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 RAD21O60216 631 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 BCL11BQ9C0K0 894 aaPredicted RBP3.94□□□□□ -1.78
NEK1-209ENST00000638824 ZMYND15Q9H091 742 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 AXIN2Q9Y2T1 843 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 FAM208AQ9UK61 1670 aaKnown RBP3.94□□□□□ -1.78
NEK1-209ENST00000638824 COL5A2P05997 1499 aaPredicted RBP3.94□□□□□ -1.78
NEK1-209ENST00000638824 SMG6Q86US8 1419 aaKnown RBP3.94□□□□□ -1.78
NEK1-209ENST00000638824 HSP90B1P14625 803 aaKnown RBP3.94□□□□□ -1.78
NEK1-209ENST00000638824 SLIT2O94813 1529 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 CDK12Q9NYV4 1490 aaPredicted RBP3.94□□□□□ -1.78
NEK1-209ENST00000638824 RGPD1P0DJD0 1748 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 RBM25P49756 843 aaKnown RBP3.94□□□□□ -1.78
NEK1-209ENST00000638824 ARHGEF25Q86VW2 580 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 KCNH5Q8NCM2 988 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 POLKQ9UBT6 870 aa3.94□□□□□ -1.78
NEK1-209ENST00000638824 ABCC6O95255 1503 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 COL3A1P02461 1466 aaPredicted RBP3.93□□□□□ -1.78
NEK1-209ENST00000638824 BCL9LQ86UU0 1499 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 AATKQ6ZMQ8 1374 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 AFF2P51816 1311 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 HOXC9P31274 260 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 RGS22Q8NE09 1264 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 LTV1Q96GA3 475 aaPredicted RBP3.93□□□□□ -1.78
NEK1-209ENST00000638824 STRN4Q9NRL3 753 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 BTG4Q9NY30 223 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 GLI3P10071 1580 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 PPP2R1AP30153 589 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 AMPHP49418 695 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 HSP90AB2PQ58FF8 381 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 DIEXFQ68CQ4 756 aaKnown RBP3.93□□□□□ -1.78
NEK1-209ENST00000638824 NGLY1Q96IV0 654 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 PRKRIP1Q9H875 184 aaPredicted RBP3.93□□□□□ -1.78
NEK1-209ENST00000638824 RTL1A6NKG5 1358 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 FLT4P35916 1363 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 APBB1O00213 710 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 MTHFSP49914 203 aa3.93□□□□□ -1.78
NEK1-209ENST00000638824 BRWD3Q6RI45 1802 aa3.92□□□□□ -1.78
NEK1-209ENST00000638824 ECM2O94769 699 aaPredicted RBP3.92□□□□□ -1.78
NEK1-209ENST00000638824 CCDC184Q52MB2 194 aa3.92□□□□□ -1.78
NEK1-209ENST00000638824 BLMP54132 1417 aaPredicted RBP3.92□□□□□ -1.78
NEK1-209ENST00000638824 SHANK3Q9BYB0 1731 aa3.92□□□□□ -1.78
NEK1-209ENST00000638824 ERBB3P21860 1342 aa3.92□□□□□ -1.78
NEK1-209ENST00000638824 LARP1Q6PKG0 1096 aaKnown RBP3.92□□□□□ -1.78
NEK1-209ENST00000638824 USHBP1Q8N6Y0 703 aa3.92□□□□□ -1.78
NEK1-209ENST00000638824 PHF12Q96QT6 1004 aa3.92□□□□□ -1.78
NEK1-209ENST00000638824 RSPH6AQ9H0K4 717 aa3.92□□□□□ -1.78
NEK1-209ENST00000638824 USP35Q9P2H5 1018 aa3.92□□□□□ -1.78
NEK1-209ENST00000638824 RGS17Q9UGC6 210 aaPredicted RBP3.92□□□□□ -1.78
NEK1-209ENST00000638824 TRPC6Q9Y210 931 aa3.92□□□□□ -1.78
NEK1-209ENST00000638824 VIRMAQ69YN4 1812 aaKnown RBP3.92□□□□□ -1.78
NEK1-209ENST00000638824 LRRC37A3O60309 1634 aa3.92□□□□□ -1.78
NEK1-209ENST00000638824 MYBBP1AQ9BQG0 1328 aaKnown RBP3.92□□□□□ -1.78
NEK1-209ENST00000638824 PARP4Q9UKK3 1724 aaKnown RBP3.92□□□□□ -1.78
NEK1-209ENST00000638824 ANP32CO43423 234 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 LHX8Q68G74 356 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 ZNF579Q8NAF0 562 aaKnown RBP3.91□□□□□ -1.78
NEK1-209ENST00000638824 ANKRD24Q8TF21 1146 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 IP6K1Q92551 441 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 USP21Q9UK80 565 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 INSRP06213 1382 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 ATRNO75882 1429 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 EIF4A2Q14240 407 aaKnown RBP3.91□□□□□ -1.78
NEK1-209ENST00000638824 RALBP1Q15311 655 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 FNBP4Q8N3X1 1017 aaPredicted RBP3.91□□□□□ -1.78
NEK1-209ENST00000638824 WDR17Q8IZU2 1322 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 THSD7AQ9UPZ6 1657 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 CRB1P82279 1406 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 CSB-PGBD3P0DP91 1061 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 UNC5CLQ8IV45 518 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 OTUD5Q96G74 571 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 BRPF3Q9ULD4 1205 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 MEGF6O75095 1541 aa3.91□□□□□ -1.78
NEK1-209ENST00000638824 POTEFA5A3E0 1075 aa3.9□□□□□ -1.78
NEK1-209ENST00000638824 EVA1CP58658 441 aa3.9□□□□□ -1.78
NEK1-209ENST00000638824 TOM1L2Q6ZVM7 507 aa3.9□□□□□ -1.78
NEK1-209ENST00000638824 MIER1Q8N108 512 aa3.9□□□□□ -1.78
NEK1-209ENST00000638824 SLC24A3Q9HC58 644 aa3.9□□□□□ -1.78
NEK1-209ENST00000638824 KIF24Q5T7B8 1368 aa3.9□□□□□ -1.78
NEK1-209ENST00000638824 PKD1L3Q7Z443 1732 aa3.9□□□□□ -1.78
NEK1-209ENST00000638824 DLG5Q8TDM6 1919 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms