RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 C8orf34Q49A92 452 aa13.14□□□□□ -0.31
PAX6-236ENST00000638685 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
PAX6-236ENST00000638685 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
PAX6-236ENST00000638685 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
PAX6-236ENST00000638685 KIF1AQ12756 1690 aa13.13□□□□□ -0.31
PAX6-236ENST00000638685 ALS2Q96Q42 1657 aa13.13□□□□□ -0.31
PAX6-236ENST00000638685 CRB1P82279 1406 aa13.13□□□□□ -0.31
PAX6-236ENST00000638685 RGS3P49796 1198 aa13.13□□□□□ -0.31
PAX6-236ENST00000638685 NBR1Q14596 966 aa13.13□□□□□ -0.31
PAX6-236ENST00000638685 LRRC59Q96AG4 307 aaKnown RBP13.13□□□□□ -0.31
PAX6-236ENST00000638685 SLIT3O75094 1523 aa13.13□□□□□ -0.31
PAX6-236ENST00000638685 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
PAX6-236ENST00000638685 DZIP1LQ8IYY4 767 aaKnown RBP13.13□□□□□ -0.31
PAX6-236ENST00000638685 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
PAX6-236ENST00000638685 RTL1A6NKG5 1358 aa13.12□□□□□ -0.31
PAX6-236ENST00000638685 CALD1Q05682 793 aaKnown RBP13.12□□□□□ -0.31
PAX6-236ENST00000638685 TWISTNBQ3B726 338 aaPredicted RBP13.12□□□□□ -0.31
PAX6-236ENST00000638685 ATF7IPQ6VMQ6 1270 aa13.12□□□□□ -0.31
PAX6-236ENST00000638685 ARHGEF25Q86VW2 580 aa13.12□□□□□ -0.31
PAX6-236ENST00000638685 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
PAX6-236ENST00000638685 PHRF1Q9P1Y6 1649 aaKnown RBP13.12□□□□□ -0.31
PAX6-236ENST00000638685 USP19O94966 1318 aa13.12□□□□□ -0.31
PAX6-236ENST00000638685 CHL1O00533 1208 aa13.12□□□□□ -0.31
PAX6-236ENST00000638685 MVPQ14764 893 aaKnown RBP13.12□□□□□ -0.31
PAX6-236ENST00000638685 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
PAX6-236ENST00000638685 ALDH1L2Q3SY69 923 aa13.11□□□□□ -0.31
PAX6-236ENST00000638685 TMEM57Q8N5G2 664 aa13.11□□□□□ -0.31
PAX6-236ENST00000638685 MRPL50Q8N5N7 158 aaKnown RBP13.11□□□□□ -0.31
PAX6-236ENST00000638685 KCNH5Q8NCM2 988 aa13.11□□□□□ -0.31
PAX6-236ENST00000638685 RWDD1Q9H446 243 aaPredicted RBP13.11□□□□□ -0.31
PAX6-236ENST00000638685 USP35Q9P2H5 1018 aa13.11□□□□□ -0.31
PAX6-236ENST00000638685 MSH6P52701 1360 aa13.11□□□□□ -0.31
PAX6-236ENST00000638685 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
PAX6-236ENST00000638685 DCCP43146 1447 aa13.1□□□□□ -0.31
PAX6-236ENST00000638685 ZC3H6P61129 1189 aaKnown RBP13.09□□□□□ -0.31
PAX6-236ENST00000638685 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
PAX6-236ENST00000638685 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.31
PAX6-236ENST00000638685 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.32
PAX6-236ENST00000638685 IL17REQ8NFR9 667 aa13.08□□□□□ -0.32
PAX6-236ENST00000638685 KIF16BQ96L93 1317 aa13.08□□□□□ -0.32
PAX6-236ENST00000638685 BRPF1P55201 1214 aaPredicted RBP13.08□□□□□ -0.32
PAX6-236ENST00000638685 ITPRIPQ8IWB1 547 aa13.08□□□□□ -0.32
PAX6-236ENST00000638685 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
PAX6-236ENST00000638685 LRRC37A3O60309 1634 aa13.07□□□□□ -0.32
PAX6-236ENST00000638685 ZNF428Q96B54 188 aa13.07□□□□□ -0.32
PAX6-236ENST00000638685 RTF1Q92541 710 aaKnown RBP13.07□□□□□ -0.32
PAX6-236ENST00000638685 PXDNQ92626 1479 aa13.06□□□□□ -0.32
PAX6-236ENST00000638685 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
PAX6-236ENST00000638685 BRINP3Q76B58 766 aa13.06□□□□□ -0.32
PAX6-236ENST00000638685 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
PAX6-236ENST00000638685 DEKP35659 375 aaKnown RBP13.06□□□□□ -0.32
PAX6-236ENST00000638685 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
PAX6-236ENST00000638685 DDX19BQ9UMR2 479 aa13.06□□□□□ -0.32
PAX6-236ENST00000638685 TSPYL4Q9UJ04 414 aa13.05□□□□□ -0.32
PAX6-236ENST00000638685 VIRMAQ69YN4 1812 aaKnown RBP13.04□□□□□ -0.32
PAX6-236ENST00000638685 MAP3K5Q99683 1374 aa13.04□□□□□ -0.32
PAX6-236ENST00000638685 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
PAX6-236ENST00000638685 ZBTB40Q9NUA8 1239 aa13.04□□□□□ -0.32
PAX6-236ENST00000638685 CRYBG1Q9Y4K1 1723 aa13.04□□□□□ -0.32
PAX6-236ENST00000638685 NPHP3Q7Z494 1330 aa13.04□□□□□ -0.32
PAX6-236ENST00000638685 COL18A1P39060 1754 aa13.04□□□□□ -0.32
PAX6-236ENST00000638685 KIAA0232Q92628 1395 aa13.03□□□□□ -0.32
PAX6-236ENST00000638685 CHRNA2Q15822 529 aa13.03□□□□□ -0.32
PAX6-236ENST00000638685 ERBB3P21860 1342 aa13.03□□□□□ -0.32
PAX6-236ENST00000638685 NCAPD2Q15021 1401 aa13.03□□□□□ -0.32
PAX6-236ENST00000638685 TNS3Q68CZ2 1445 aa13.03□□□□□ -0.32
PAX6-236ENST00000638685 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.32
PAX6-236ENST00000638685 SPATA31A3Q5VYP0 1347 aa13.02□□□□□ -0.32
PAX6-236ENST00000638685 RGS12O14924 1447 aa13.02□□□□□ -0.32
PAX6-236ENST00000638685 HDAC1Q13547 482 aaPredicted RBP13.02□□□□□ -0.33
PAX6-236ENST00000638685 ABCC4O15439 1325 aa13.02□□□□□ -0.33
PAX6-236ENST00000638685 ARHGAP45Q92619 1136 aa13.01□□□□□ -0.33
PAX6-236ENST00000638685 UPF2Q9HAU5 1272 aaKnown RBP13.01□□□□□ -0.33
PAX6-236ENST00000638685 PDZRN3Q9UPQ7 1066 aa13.01□□□□□ -0.33
PAX6-236ENST00000638685 ZBTB7BO15156 539 aaPredicted RBP13.01□□□□□ -0.33
PAX6-236ENST00000638685 HTATSF1O43719 755 aaKnown RBP13.01□□□□□ -0.33
PAX6-236ENST00000638685 G2E3Q7L622 706 aa13.01□□□□□ -0.33
PAX6-236ENST00000638685 CHMP4BQ9H444 224 aaKnown RBP13.01□□□□□ -0.33
PAX6-236ENST00000638685 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
PAX6-236ENST00000638685 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
PAX6-236ENST00000638685 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
PAX6-236ENST00000638685 MPRIPQ6WCQ1 1025 aa13□□□□□ -0.33
PAX6-236ENST00000638685 NECTIN2Q92692 538 aa13□□□□□ -0.33
PAX6-236ENST00000638685 LMO7Q8WWI1 1683 aa12.99□□□□□ -0.33
PAX6-236ENST00000638685 KCNQ3O43525 872 aa12.99□□□□□ -0.33
PAX6-236ENST00000638685 ZNF530Q6P9A1 599 aaPredicted RBP12.99□□□□□ -0.33
PAX6-236ENST00000638685 FAM208AQ9UK61 1670 aaKnown RBP12.99□□□□□ -0.33
PAX6-236ENST00000638685 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
PAX6-236ENST00000638685 TAF7Q15545 349 aaPredicted RBP12.99□□□□□ -0.33
PAX6-236ENST00000638685 BECN1Q14457 450 aa12.98□□□□□ -0.33
PAX6-236ENST00000638685 SOS2Q07890 1332 aaPredicted RBP12.97□□□□□ -0.33
PAX6-236ENST00000638685 SIRT2Q8IXJ6 389 aa12.96□□□□□ -0.33
PAX6-236ENST00000638685 NLRP2Q9NX02 1062 aa12.96□□□□□ -0.33
PAX6-236ENST00000638685 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.33
PAX6-236ENST00000638685 F6X3S4 739 aa12.96□□□□□ -0.33
PAX6-236ENST00000638685 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.33
PAX6-236ENST00000638685 AKAP4Q5JQC9 854 aa12.96□□□□□ -0.33
PAX6-236ENST00000638685 MEGF6O75095 1541 aa12.96□□□□□ -0.34
PAX6-236ENST00000638685 SLC4A3P48751 1232 aa12.95□□□□□ -0.34
PAX6-236ENST00000638685 API5Q9BZZ5 524 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms