RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 ATP7BP35670 1465 aa14.87□□□□□ -0.03
GFAP-228ENST00000638488 ROBO2Q9HCK4 1378 aa14.86□□□□□ -0.03
GFAP-228ENST00000638488 TRIM35Q9UPQ4 493 aa14.86□□□□□ -0.03
GFAP-228ENST00000638488 UBR1Q8IWV7 1749 aa14.86□□□□□ -0.03
GFAP-228ENST00000638488 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
GFAP-228ENST00000638488 CAVIN1Q6NZI2 390 aaKnown RBP14.86□□□□□ -0.03
GFAP-228ENST00000638488 EXOSC9Q06265 439 aaKnown RBP14.85□□□□□ -0.03
GFAP-228ENST00000638488 COG3Q96JB2 828 aa14.85□□□□□ -0.03
GFAP-228ENST00000638488 PRIM1P49642 420 aaKnown RBP14.85□□□□□ -0.03
GFAP-228ENST00000638488 KIF3AQ9Y496 699 aa14.85□□□□□ -0.03
GFAP-228ENST00000638488 EID1Q9Y6B2 187 aa14.85□□□□□ -0.03
GFAP-228ENST00000638488 PRR36Q9H6K5 1346 aa14.84□□□□□ -0.03
GFAP-228ENST00000638488 SOX12O15370 315 aa14.84□□□□□ -0.03
GFAP-228ENST00000638488 RLBP1P12271 317 aa14.84□□□□□ -0.03
GFAP-228ENST00000638488 SLC20A2Q08357 652 aa14.84□□□□□ -0.03
GFAP-228ENST00000638488 HDAC1Q13547 482 aaPredicted RBP14.84□□□□□ -0.03
GFAP-228ENST00000638488 CDK11BP21127 795 aaKnown RBP14.84□□□□□ -0.03
GFAP-228ENST00000638488 LRSAM1Q6UWE0 723 aa14.84□□□□□ -0.03
GFAP-228ENST00000638488 ZNF830Q96NB3 372 aaPredicted RBP14.84□□□□□ -0.03
GFAP-228ENST00000638488 LMBRD1Q9NUN5 540 aa14.84□□□□□ -0.03
GFAP-228ENST00000638488 EDC4Q6P2E9 1401 aaKnown RBP14.84□□□□□ -0.03
GFAP-228ENST00000638488 ADGRB2O60241 1585 aa14.84□□□□□ -0.03
GFAP-228ENST00000638488 NUCB2P80303 420 aa14.83□□□□□ -0.03
GFAP-228ENST00000638488 KIF2CQ99661 725 aa14.83□□□□□ -0.04
GFAP-228ENST00000638488 FEZ1Q99689 392 aa14.83□□□□□ -0.04
GFAP-228ENST00000638488 CPSF1Q10570 1443 aaKnown RBP14.83□□□□□ -0.04
GFAP-228ENST00000638488 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.04
GFAP-228ENST00000638488 MVPQ14764 893 aaKnown RBP14.82□□□□□ -0.04
GFAP-228ENST00000638488 PNPLA6Q8IY17 1366 aa14.82□□□□□ -0.04
GFAP-228ENST00000638488 FAM135BQ49AJ0 1406 aa14.82□□□□□ -0.04
GFAP-228ENST00000638488 PDCL2Q8N4E4 241 aa14.82□□□□□ -0.04
GFAP-228ENST00000638488 PIBF1Q8WXW3 757 aa14.82□□□□□ -0.04
GFAP-228ENST00000638488 SMC4Q9NTJ3 1288 aa14.82□□□□□ -0.04
GFAP-228ENST00000638488 MAP2P11137 1827 aaKnown RBP14.82□□□□□ -0.04
GFAP-228ENST00000638488 DNTTIP2Q5QJE6 756 aaKnown RBP14.81□□□□□ -0.04
GFAP-228ENST00000638488 PHACTR3Q96KR7 559 aa14.81□□□□□ -0.04
GFAP-228ENST00000638488 THUMPD2Q9BTF0 503 aaKnown RBP14.81□□□□□ -0.04
GFAP-228ENST00000638488 CPS1P31327 1500 aa14.81□□□□□ -0.04
GFAP-228ENST00000638488 FCHSD2O94868 740 aa14.81□□□□□ -0.04
GFAP-228ENST00000638488 GABPB1Q06547 395 aaPredicted RBP14.81□□□□□ -0.04
GFAP-228ENST00000638488 CYP2E1P05181 493 aaPredicted RBP14.8□□□□□ -0.04
GFAP-228ENST00000638488 MCTP1Q6DN14 999 aa14.8□□□□□ -0.04
GFAP-228ENST00000638488 FTSJ3Q8IY81 847 aaKnown RBP14.8□□□□□ -0.04
GFAP-228ENST00000638488 CGNQ9P2M7 1197 aaKnown RBP14.8□□□□□ -0.04
GFAP-228ENST00000638488 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.8□□□□□ -0.04
GFAP-228ENST00000638488 GAS2L2Q8NHY3 880 aa14.8□□□□□ -0.04
GFAP-228ENST00000638488 AMOTL2Q9Y2J4 779 aa14.8□□□□□ -0.04
GFAP-228ENST00000638488 TECPR2O15040 1411 aa14.8□□□□□ -0.04
GFAP-228ENST00000638488 KIF16BQ96L93 1317 aa14.8□□□□□ -0.04
GFAP-228ENST00000638488 PLEKHG1Q9ULL1 1385 aa14.8□□□□□ -0.04
GFAP-228ENST00000638488 LRRC7Q96NW7 1537 aa14.79□□□□□ -0.04
GFAP-228ENST00000638488 ACEP12821 1306 aa14.79□□□□□ -0.04
GFAP-228ENST00000638488 PTMAP06454 111 aaKnown RBP14.79□□□□□ -0.04
GFAP-228ENST00000638488 SIRT1Q96EB6 747 aa14.79□□□□□ -0.04
GFAP-228ENST00000638488 BCL2L12Q9HB09 334 aa14.79□□□□□ -0.04
GFAP-228ENST00000638488 ANKRD7Q92527 254 aa14.79□□□□□ -0.04
GFAP-228ENST00000638488 CDC42BPGQ6DT37 1551 aa14.78□□□□□ -0.04
GFAP-228ENST00000638488 KNDC1Q76NI1 1749 aa14.78□□□□□ -0.04
GFAP-228ENST00000638488 VGLL3A8MV65 326 aa14.78□□□□□ -0.04
GFAP-228ENST00000638488 CD2BP2O95400 341 aaKnown RBP14.78□□□□□ -0.04
GFAP-228ENST00000638488 SPTLC3Q9NUV7 552 aa14.78□□□□□ -0.04
GFAP-228ENST00000638488 PTPRUQ92729 1446 aa14.78□□□□□ -0.04
GFAP-228ENST00000638488 IL13P35225 146 aa14.78□□□□□ -0.04
GFAP-228ENST00000638488 FKBP5Q13451 457 aaPredicted RBP14.78□□□□□ -0.04
GFAP-228ENST00000638488 ZKSCAN2Q63HK3 967 aa14.78□□□□□ -0.04
GFAP-228ENST00000638488 ZNF771Q7L3S4 317 aaPredicted RBP14.78□□□□□ -0.04
GFAP-228ENST00000638488 SSH1Q8WYL5 1049 aa14.78□□□□□ -0.04
GFAP-228ENST00000638488 AK9Q5TCS8 1911 aa14.77□□□□□ -0.04
GFAP-228ENST00000638488 NOLC1Q14978 699 aaKnown RBP eCLIP14.77□□□□□ -0.04
GFAP-228ENST00000638488 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.04
GFAP-228ENST00000638488 OGFRQ9NZT2 677 aa14.77□□□□□ -0.04
GFAP-228ENST00000638488 C3P01024 1663 aa14.77□□□□□ -0.05
GFAP-228ENST00000638488 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.77□□□□□ -0.05
GFAP-228ENST00000638488 KLHL34Q8N239 644 aa14.77□□□□□ -0.05
GFAP-228ENST00000638488 CCDC66A2RUB6 948 aa14.76□□□□□ -0.05
GFAP-228ENST00000638488 BMP2KLQ5H9B9 411 aa14.76□□□□□ -0.05
GFAP-228ENST00000638488 DZIP1LQ8IYY4 767 aaKnown RBP14.76□□□□□ -0.05
GFAP-228ENST00000638488 TSC1Q92574 1164 aa14.76□□□□□ -0.05
GFAP-228ENST00000638488 DNAJC2Q99543 621 aaKnown RBP14.76□□□□□ -0.05
GFAP-228ENST00000638488 JARID2Q92833 1246 aaPredicted RBP14.76□□□□□ -0.05
GFAP-228ENST00000638488 TTC21BQ7Z4L5 1316 aa14.76□□□□□ -0.05
GFAP-228ENST00000638488 ELL2O00472 640 aaPredicted RBP14.75□□□□□ -0.05
GFAP-228ENST00000638488 NFE2L2Q16236 605 aa14.75□□□□□ -0.05
GFAP-228ENST00000638488 THEMISQ8N1K5 641 aaPredicted RBP14.75□□□□□ -0.05
GFAP-228ENST00000638488 GPT2Q8TD30 523 aa14.75□□□□□ -0.05
GFAP-228ENST00000638488 NOB1Q9ULX3 412 aaKnown RBP14.75□□□□□ -0.05
GFAP-228ENST00000638488 ITSN1Q15811 1721 aa14.75□□□□□ -0.05
GFAP-228ENST00000638488 SPDYE4A6NLX3 237 aa14.75□□□□□ -0.05
GFAP-228ENST00000638488 IRX5P78411 483 aaPredicted RBP14.75□□□□□ -0.05
GFAP-228ENST00000638488 ITPRIPQ8IWB1 547 aa14.75□□□□□ -0.05
GFAP-228ENST00000638488 DIAPH3Q9NSV4 1193 aa14.75□□□□□ -0.05
GFAP-228ENST00000638488 MBD3O95983 291 aa14.74□□□□□ -0.05
GFAP-228ENST00000638488 CWC22Q9HCG8 908 aaKnown RBP14.74□□□□□ -0.05
GFAP-228ENST00000638488 FER1L4A9Z1Z3 1794 aa14.74□□□□□ -0.05
GFAP-228ENST00000638488 FAM83GA6ND36 823 aa14.74□□□□□ -0.05
GFAP-228ENST00000638488 TRIM27P14373 513 aa14.74□□□□□ -0.05
GFAP-228ENST00000638488 MON2Q7Z3U7 1717 aa14.73□□□□□ -0.05
GFAP-228ENST00000638488 IL16Q14005 1332 aa14.73□□□□□ -0.05
GFAP-228ENST00000638488 DCTN1Q14203 1278 aa14.73□□□□□ -0.05
GFAP-228ENST00000638488 NGDNQ8NEJ9 315 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms