RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 RREB1Q92766 1687 aa17.16■□□□□ 0.34
GFAP-227ENST00000638400 KCNQ2O43526 872 aa17.15■□□□□ 0.34
GFAP-227ENST00000638400 NBPF14Q5TI25 921 aa17.15■□□□□ 0.34
GFAP-227ENST00000638400 ACSBG1Q96GR2 724 aa17.15■□□□□ 0.34
GFAP-227ENST00000638400 RGPD3A6NKT7 1758 aaPredicted RBP17.15■□□□□ 0.34
GFAP-227ENST00000638400 RGPD4Q7Z3J3 1758 aa17.15■□□□□ 0.34
GFAP-227ENST00000638400 NHSQ6T4R5 1651 aa17.14■□□□□ 0.33
GFAP-227ENST00000638400 MSH5O43196 834 aa17.14■□□□□ 0.33
GFAP-227ENST00000638400 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
GFAP-227ENST00000638400 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
GFAP-227ENST00000638400 NCAPD2Q15021 1401 aa17.13■□□□□ 0.33
GFAP-227ENST00000638400 SBF2Q86WG5 1849 aa17.13■□□□□ 0.33
GFAP-227ENST00000638400 NUP188Q5SRE5 1749 aa17.13■□□□□ 0.33
GFAP-227ENST00000638400 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
GFAP-227ENST00000638400 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
GFAP-227ENST00000638400 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
GFAP-227ENST00000638400 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
GFAP-227ENST00000638400 EIF4A2Q14240 407 aaKnown RBP17.1■□□□□ 0.33
GFAP-227ENST00000638400 TXNRD1Q16881 649 aa17.1■□□□□ 0.33
GFAP-227ENST00000638400 PROM2Q8N271 834 aa17.09■□□□□ 0.33
GFAP-227ENST00000638400 EYA1Q99502 592 aa17.09■□□□□ 0.33
GFAP-227ENST00000638400 LRP5O75197 1615 aa17.07■□□□□ 0.32
GFAP-227ENST00000638400 SYTL4Q96C24 671 aaPredicted RBP17.07■□□□□ 0.32
GFAP-227ENST00000638400 ANO8Q9HCE9 1232 aaPredicted RBP17.07■□□□□ 0.32
GFAP-227ENST00000638400 PER1O15534 1290 aaPredicted RBP17.06■□□□□ 0.32
GFAP-227ENST00000638400 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
GFAP-227ENST00000638400 SHANK3Q9BYB0 1731 aa17.06■□□□□ 0.32
GFAP-227ENST00000638400 PLEKHG2Q9H7P9 1386 aa17.05■□□□□ 0.32
GFAP-227ENST00000638400 IGSF1Q8N6C5 1336 aa17.05■□□□□ 0.32
GFAP-227ENST00000638400 SPG7Q9UQ90 795 aa17.05■□□□□ 0.32
GFAP-227ENST00000638400 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
GFAP-227ENST00000638400 CYP27B1O15528 508 aa17.04■□□□□ 0.32
GFAP-227ENST00000638400 STK32BQ9NY57 414 aa17.04■□□□□ 0.32
GFAP-227ENST00000638400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.04■□□□□ 0.32
GFAP-227ENST00000638400 MAP2P11137 1827 aaKnown RBP17.04■□□□□ 0.32
GFAP-227ENST00000638400 BTAF1O14981 1849 aa17.03■□□□□ 0.32
GFAP-227ENST00000638400 CC2D1BQ5T0F9 858 aaKnown RBP17.03■□□□□ 0.32
GFAP-227ENST00000638400 PELP1Q8IZL8 1130 aaKnown RBP17.03■□□□□ 0.32
GFAP-227ENST00000638400 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
GFAP-227ENST00000638400 PKD1L3Q7Z443 1732 aa17.02■□□□□ 0.32
GFAP-227ENST00000638400 SLC27A3Q5K4L6 730 aa17.02■□□□□ 0.32
GFAP-227ENST00000638400 SLC15A2Q16348 729 aa17■□□□□ 0.31
GFAP-227ENST00000638400 NKX1-1Q15270 411 aaPredicted RBP16.99■□□□□ 0.31
GFAP-227ENST00000638400 LRRC4BQ9NT99 713 aa16.99■□□□□ 0.31
GFAP-227ENST00000638400 PAPPAQ13219 1627 aa16.99■□□□□ 0.31
GFAP-227ENST00000638400 IL13P35225 146 aa16.98■□□□□ 0.31
GFAP-227ENST00000638400 MTHFSP49914 203 aa16.98■□□□□ 0.31
GFAP-227ENST00000638400 IFNL2Q8IZJ0 200 aa16.98■□□□□ 0.31
GFAP-227ENST00000638400 PHKG2P15735 406 aa16.97■□□□□ 0.31
GFAP-227ENST00000638400 AEBP1Q8IUX7 1158 aa16.97■□□□□ 0.31
GFAP-227ENST00000638400 SPON1Q9HCB6 807 aa16.97■□□□□ 0.31
GFAP-227ENST00000638400 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.31
GFAP-227ENST00000638400 MPRIPQ6WCQ1 1025 aa16.96■□□□□ 0.31
GFAP-227ENST00000638400 CCNL1Q9UK58 526 aaPredicted RBP16.96■□□□□ 0.31
GFAP-227ENST00000638400 KDRP35968 1356 aa16.96■□□□□ 0.31
GFAP-227ENST00000638400 PALLDQ8WX93 1383 aa16.95■□□□□ 0.3
GFAP-227ENST00000638400 CNGB1Q14028 1251 aaPredicted RBP16.95■□□□□ 0.3
GFAP-227ENST00000638400 ZNF827Q17R98 1081 aa16.95■□□□□ 0.3
GFAP-227ENST00000638400 AMOTQ4VCS5 1084 aa16.95■□□□□ 0.3
GFAP-227ENST00000638400 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
GFAP-227ENST00000638400 PDGFDQ9GZP0 370 aaPredicted RBP16.94■□□□□ 0.3
GFAP-227ENST00000638400 CASZ1Q86V15 1759 aa16.94■□□□□ 0.3
GFAP-227ENST00000638400 TOGARAM1Q9Y4F4 1720 aa16.93■□□□□ 0.3
GFAP-227ENST00000638400 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
GFAP-227ENST00000638400 KCNQ4P56696 695 aa16.93■□□□□ 0.3
GFAP-227ENST00000638400 ZNF530Q6P9A1 599 aaPredicted RBP16.93■□□□□ 0.3
GFAP-227ENST00000638400 PIGBQ92521 554 aa16.93■□□□□ 0.3
GFAP-227ENST00000638400 SMARCC1Q92922 1105 aaPredicted RBP16.93■□□□□ 0.3
GFAP-227ENST00000638400 AKT1S1Q96B36 256 aa16.93■□□□□ 0.3
GFAP-227ENST00000638400 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
GFAP-227ENST00000638400 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
GFAP-227ENST00000638400 ZBTB7AO95365 584 aa16.92■□□□□ 0.3
GFAP-227ENST00000638400 HMGB2P26583 209 aaKnown RBP16.91■□□□□ 0.3
GFAP-227ENST00000638400 DCAF5Q96JK2 942 aa16.91■□□□□ 0.3
GFAP-227ENST00000638400 PPP1R1BQ9UD71 204 aaPredicted RBP16.91■□□□□ 0.3
GFAP-227ENST00000638400 COL3A1P02461 1466 aaPredicted RBP16.91■□□□□ 0.3
GFAP-227ENST00000638400 LY75O60449 1722 aa16.9■□□□□ 0.3
GFAP-227ENST00000638400 C1orf141Q5JVX7 400 aa16.9■□□□□ 0.3
GFAP-227ENST00000638400 MTFR1LQ9H019 292 aa16.9■□□□□ 0.3
GFAP-227ENST00000638400 TFCP2L1Q9NZI6 479 aa16.9■□□□□ 0.3
GFAP-227ENST00000638400 KAT6BQ8WYB5 2073 aa16.9■□□□□ 0.3
GFAP-227ENST00000638400 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
GFAP-227ENST00000638400 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
GFAP-227ENST00000638400 HMOX1P09601 288 aa16.88■□□□□ 0.29
GFAP-227ENST00000638400 PNPLA7Q6ZV29 1317 aa16.88■□□□□ 0.29
GFAP-227ENST00000638400 CFAP53Q96M91 514 aa16.87■□□□□ 0.29
GFAP-227ENST00000638400 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
GFAP-227ENST00000638400 PTGER2P43116 358 aa16.86■□□□□ 0.29
GFAP-227ENST00000638400 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
GFAP-227ENST00000638400 LOC102724428A0A0B4J2F2 783 aa16.85■□□□□ 0.29
GFAP-227ENST00000638400 U2SURPO15042 1029 aaKnown RBP16.85■□□□□ 0.29
GFAP-227ENST00000638400 PPP2R1AP30153 589 aa16.85■□□□□ 0.29
GFAP-227ENST00000638400 SIK1P57059 783 aa16.85■□□□□ 0.29
GFAP-227ENST00000638400 CABP4P57796 275 aa16.85■□□□□ 0.29
GFAP-227ENST00000638400 SLC16A10Q8TF71 515 aa16.85■□□□□ 0.29
GFAP-227ENST00000638400 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
GFAP-227ENST00000638400 MIER1Q8N108 512 aa16.84■□□□□ 0.29
GFAP-227ENST00000638400 ATG3Q9NT62 314 aa16.84■□□□□ 0.29
GFAP-227ENST00000638400 ITGB4P16144 1822 aa16.84■□□□□ 0.29
GFAP-227ENST00000638400 AK7Q96M32 723 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms