RNA–Protein interactions for RNA: ENST00000638149.1

GABRB3-226, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-226ENST00000638149 IGSF1Q8N6C5 1336 aa6.54□□□□□ -1.36
GABRB3-226ENST00000638149 KIAA1210Q9ULL0 1709 aa6.54□□□□□ -1.36
GABRB3-226ENST00000638149 HMGB2P26583 209 aaKnown RBP6.54□□□□□ -1.36
GABRB3-226ENST00000638149 NEUROD1Q13562 356 aa6.54□□□□□ -1.36
GABRB3-226ENST00000638149 MPRIPQ6WCQ1 1025 aa6.54□□□□□ -1.36
GABRB3-226ENST00000638149 FLAD1Q8NFF5 587 aa6.54□□□□□ -1.36
GABRB3-226ENST00000638149 ZCRB1Q8TBF4 217 aaKnown RBP6.54□□□□□ -1.36
GABRB3-226ENST00000638149 ANKRD36BQ8N2N9 1353 aa6.54□□□□□ -1.36
GABRB3-226ENST00000638149 RAPGEF4Q8WZA2 1011 aa6.53□□□□□ -1.36
GABRB3-226ENST00000638149 LTN1O94822 1766 aa6.52□□□□□ -1.37
GABRB3-226ENST00000638149 NFAT5O94916 1531 aa6.52□□□□□ -1.37
GABRB3-226ENST00000638149 TATP17735 454 aaPredicted RBP6.52□□□□□ -1.37
GABRB3-226ENST00000638149 ARHGAP27Q6ZUM4 889 aa6.52□□□□□ -1.37
GABRB3-226ENST00000638149 TNS4Q8IZW8 715 aa6.52□□□□□ -1.37
GABRB3-226ENST00000638149 USHBP1Q8N6Y0 703 aa6.52□□□□□ -1.37
GABRB3-226ENST00000638149 COG3Q96JB2 828 aa6.52□□□□□ -1.37
GABRB3-226ENST00000638149 TERF2IPQ9NYB0 399 aa6.52□□□□□ -1.37
GABRB3-226ENST00000638149 BCS1LQ9Y276 419 aa6.52□□□□□ -1.37
GABRB3-226ENST00000638149 DOT1LQ8TEK3 1739 aa6.52□□□□□ -1.37
GABRB3-226ENST00000638149 CEP350Q5VT06 3117 aa6.52□□□□□ -1.37
GABRB3-226ENST00000638149 TOMM70O94826 608 aa6.51□□□□□ -1.37
GABRB3-226ENST00000638149 IP6K1Q92551 441 aa6.51□□□□□ -1.37
GABRB3-226ENST00000638149 SMG6Q86US8 1419 aaKnown RBP6.5□□□□□ -1.37
GABRB3-226ENST00000638149 QSER1Q2KHR3 1735 aa6.5□□□□□ -1.37
GABRB3-226ENST00000638149 TUBGCP6Q96RT7 1819 aa6.5□□□□□ -1.37
GABRB3-226ENST00000638149 PALLDQ8WX93 1383 aa6.5□□□□□ -1.37
GABRB3-226ENST00000638149 KIF3CO14782 793 aa6.5□□□□□ -1.37
GABRB3-226ENST00000638149 FCHSD2O94868 740 aa6.5□□□□□ -1.37
GABRB3-226ENST00000638149 HTRA3P83110 453 aa6.5□□□□□ -1.37
GABRB3-226ENST00000638149 SMIM5Q71RC9 77 aa6.5□□□□□ -1.37
GABRB3-226ENST00000638149 L3MBTL2Q969R5 705 aa6.5□□□□□ -1.37
GABRB3-226ENST00000638149 GOLGB1Q14789 3259 aaKnown RBP6.5□□□□□ -1.37
GABRB3-226ENST00000638149 USP31Q70CQ4 1352 aa6.49□□□□□ -1.37
GABRB3-226ENST00000638149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.49□□□□□ -1.37
GABRB3-226ENST00000638149 GNPATO15228 680 aa6.49□□□□□ -1.37
GABRB3-226ENST00000638149 HOXC9P31274 260 aa6.49□□□□□ -1.37
GABRB3-226ENST00000638149 COL13A1Q5TAT6 717 aaPredicted RBP6.49□□□□□ -1.37
GABRB3-226ENST00000638149 SMARCC1Q92922 1105 aaPredicted RBP6.49□□□□□ -1.37
GABRB3-226ENST00000638149 CARD11Q9BXL7 1154 aa6.49□□□□□ -1.37
GABRB3-226ENST00000638149 SLC12A5Q9H2X9 1139 aa6.49□□□□□ -1.37
GABRB3-226ENST00000638149 NMRK2Q9NPI5 230 aa6.49□□□□□ -1.37
GABRB3-226ENST00000638149 NSD3Q9BZ95 1437 aa6.49□□□□□ -1.37
GABRB3-226ENST00000638149 PCDH11XQ9BZA7 1347 aa6.49□□□□□ -1.37
GABRB3-226ENST00000638149 PCDH11YQ9BZA8 1340 aa6.49□□□□□ -1.37
GABRB3-226ENST00000638149 ADCY9O60503 1353 aa6.48□□□□□ -1.37
GABRB3-226ENST00000638149 PPM1GO15355 546 aaPredicted RBP6.48□□□□□ -1.37
GABRB3-226ENST00000638149 FBLN1P23142 703 aa6.48□□□□□ -1.37
GABRB3-226ENST00000638149 RRS1Q15050 365 aaKnown RBP6.48□□□□□ -1.37
GABRB3-226ENST00000638149 EDC4Q6P2E9 1401 aaKnown RBP6.48□□□□□ -1.37
GABRB3-226ENST00000638149 C5P01031 1676 aa6.48□□□□□ -1.37
GABRB3-226ENST00000638149 MAP3K19Q56UN5 1328 aa6.48□□□□□ -1.37
GABRB3-226ENST00000638149 KDM2BQ8NHM5 1336 aa6.48□□□□□ -1.37
GABRB3-226ENST00000638149 LY75O60449 1722 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 MON2Q7Z3U7 1717 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 NSD2O96028 1365 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 MEGF6O75095 1541 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 FAM208AQ9UK61 1670 aaKnown RBP6.47□□□□□ -1.37
GABRB3-226ENST00000638149 A0A0G2JLW4 131 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 MMP10P09238 476 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 ATP6V1AP38606 617 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 KLRG1Q96E93 195 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 SIN3AQ96ST3 1273 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 CCDC87Q9NVE4 849 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 TMOD3Q9NYL9 352 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 PARP3Q9Y6F1 533 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 CGNL1Q0VF96 1302 aa6.47□□□□□ -1.37
GABRB3-226ENST00000638149 A0A1W2PP64 1363 aa6.46□□□□□ -1.37
GABRB3-226ENST00000638149 SBNO2Q9Y2G9 1366 aa6.46□□□□□ -1.37
GABRB3-226ENST00000638149 SSFA2P28290 1259 aa6.46□□□□□ -1.38
GABRB3-226ENST00000638149 TRAPPC3LQ5T215 181 aa6.46□□□□□ -1.38
GABRB3-226ENST00000638149 NBPF6Q5VWK0 638 aa6.46□□□□□ -1.38
GABRB3-226ENST00000638149 C9orf131Q5VYM1 1079 aa6.46□□□□□ -1.38
GABRB3-226ENST00000638149 RBM46Q8TBY0 533 aaKnown RBP6.46□□□□□ -1.38
GABRB3-226ENST00000638149 NBPF4Q96M43 638 aa6.46□□□□□ -1.38
GABRB3-226ENST00000638149 RBM42Q9BTD8 480 aaKnown RBP6.46□□□□□ -1.38
GABRB3-226ENST00000638149 RRAGCQ9HB90 399 aa6.46□□□□□ -1.38
GABRB3-226ENST00000638149 RNF181Q9P0P0 153 aa6.46□□□□□ -1.38
GABRB3-226ENST00000638149 RTCBQ9Y3I0 505 aaKnown RBP6.46□□□□□ -1.38
GABRB3-226ENST00000638149 C4BP0C0L5 1744 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 COL24A1Q17RW2 1714 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 LOC102724428A0A0B4J2F2 783 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 DPEP1P16444 411 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 RFC4P35249 363 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 PRELPP51888 382 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 SIK1P57059 783 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 TGFB2P61812 414 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 TMF1P82094 1093 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 FSTL1Q12841 308 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 DNAJC5GQ8N7S2 189 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 GGNBP2Q9H3C7 697 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 SPG7Q9UQ90 795 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 WDR90Q96KV7 1748 aa6.45□□□□□ -1.38
GABRB3-226ENST00000638149 DALRD3Q5D0E6 543 aaKnown RBP6.44□□□□□ -1.38
GABRB3-226ENST00000638149 NLGN1Q8N2Q7 840 aa6.44□□□□□ -1.38
GABRB3-226ENST00000638149 LINC00116Q8NCU8 138 aa6.44□□□□□ -1.38
GABRB3-226ENST00000638149 SMC1BQ8NDV3 1235 aa6.44□□□□□ -1.38
GABRB3-226ENST00000638149 PIGBQ92521 554 aa6.44□□□□□ -1.38
GABRB3-226ENST00000638149 RGPD2P0DJD1 1756 aa6.44□□□□□ -1.38
GABRB3-226ENST00000638149 PLEKHG2Q9H7P9 1386 aa6.44□□□□□ -1.38
GABRB3-226ENST00000638149 HSPA1AP0DMV8 641 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms