RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	PNPLA7	Q6ZV29	1317 aa		13.26	□□□□□ -0.29
CACNA1A-256	ENST00000637981	QSER1	Q2KHR3	1735 aa		13.26	□□□□□ -0.29
CACNA1A-256	ENST00000637981	KCNQ4	P56696	695 aa		13.25	□□□□□ -0.29
CACNA1A-256	ENST00000637981	SYTL4	Q96C24	671 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNA1A-256	ENST00000637981	LTV1	Q96GA3	475 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNA1A-256	ENST00000637981	GIGYF1	O75420	1035 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNA1A-256	ENST00000637981	IP6K1	Q92551	441 aa		13.24	□□□□□ -0.29
CACNA1A-256	ENST00000637981	CARD11	Q9BXL7	1154 aa		13.24	□□□□□ -0.29
CACNA1A-256	ENST00000637981	TERF2IP	Q9NYB0	399 aa		13.24	□□□□□ -0.29
CACNA1A-256	ENST00000637981	COL24A1	Q17RW2	1714 aa		13.24	□□□□□ -0.29
CACNA1A-256	ENST00000637981	FAM208A	Q9UK61	1670 aa	Known RBP	13.24	□□□□□ -0.29
CACNA1A-256	ENST00000637981		A0A1W2PP64	1363 aa		13.23	□□□□□ -0.29
CACNA1A-256	ENST00000637981	PRIM1	P49642	420 aa	Known RBP	13.23	□□□□□ -0.29
CACNA1A-256	ENST00000637981	NLGN2	Q8NFZ4	835 aa		13.23	□□□□□ -0.29
CACNA1A-256	ENST00000637981	TUBGCP6	Q96RT7	1819 aa		13.23	□□□□□ -0.29
CACNA1A-256	ENST00000637981	ANKRD36B	Q8N2N9	1353 aa		13.22	□□□□□ -0.29
CACNA1A-256	ENST00000637981	DOT1L	Q8TEK3	1739 aa		13.22	□□□□□ -0.29
CACNA1A-256	ENST00000637981	LY75	O60449	1722 aa		13.21	□□□□□ -0.3
CACNA1A-256	ENST00000637981	NSD2	O96028	1365 aa		13.21	□□□□□ -0.3
CACNA1A-256	ENST00000637981	SLC24A1	O60721	1099 aa		13.2	□□□□□ -0.3
CACNA1A-256	ENST00000637981	CCNL1	Q9UK58	526 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNA1A-256	ENST00000637981	MAP3K19	Q56UN5	1328 aa		13.19	□□□□□ -0.3
CACNA1A-256	ENST00000637981	SHANK3	Q9BYB0	1731 aa		13.19	□□□□□ -0.3
CACNA1A-256	ENST00000637981	HOXC9	P31274	260 aa		13.19	□□□□□ -0.3
CACNA1A-256	ENST00000637981	AMPH	P49418	695 aa		13.19	□□□□□ -0.3
CACNA1A-256	ENST00000637981	ZCRB1	Q8TBF4	217 aa	Known RBP	13.19	□□□□□ -0.3
CACNA1A-256	ENST00000637981	COG3	Q96JB2	828 aa		13.19	□□□□□ -0.3
CACNA1A-256	ENST00000637981	GOLGB1	Q14789	3259 aa	Known RBP	13.19	□□□□□ -0.3
CACNA1A-256	ENST00000637981	GRIN3B	O60391	1043 aa		13.18	□□□□□ -0.3
CACNA1A-256	ENST00000637981	YBX3	P16989	372 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
CACNA1A-256	ENST00000637981	FBLN1	P23142	703 aa		13.18	□□□□□ -0.3
CACNA1A-256	ENST00000637981	PUS7	Q96PZ0	661 aa	Known RBP	13.18	□□□□□ -0.3
CACNA1A-256	ENST00000637981	TESK2	Q96S53	571 aa		13.18	□□□□□ -0.3
CACNA1A-256	ENST00000637981	USP47	Q96K76	1375 aa		13.18	□□□□□ -0.3
CACNA1A-256	ENST00000637981	MEGF6	O75095	1541 aa		13.18	□□□□□ -0.3
CACNA1A-256	ENST00000637981	RGPD2	P0DJD1	1756 aa		13.17	□□□□□ -0.3
CACNA1A-256	ENST00000637981	COL23A1	Q86Y22	540 aa	Predicted RBP	13.17	□□□□□ -0.3
CACNA1A-256	ENST00000637981	MSL1	Q68DK7	614 aa		13.16	□□□□□ -0.3
CACNA1A-256	ENST00000637981	PPP4R3CP	Q6ZMV5	832 aa		13.15	□□□□□ -0.3
CACNA1A-256	ENST00000637981	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
CACNA1A-256	ENST00000637981	CGNL1	Q0VF96	1302 aa		13.14	□□□□□ -0.31
CACNA1A-256	ENST00000637981	RRS1	Q15050	365 aa	Known RBP	13.13	□□□□□ -0.31
CACNA1A-256	ENST00000637981	IFFO2	Q5TF58	517 aa		13.13	□□□□□ -0.31
CACNA1A-256	ENST00000637981	NBPF6	Q5VWK0	638 aa		13.13	□□□□□ -0.31
CACNA1A-256	ENST00000637981	USHBP1	Q8N6Y0	703 aa		13.13	□□□□□ -0.31
CACNA1A-256	ENST00000637981	NBPF4	Q96M43	638 aa		13.13	□□□□□ -0.31
CACNA1A-256	ENST00000637981	RTL1	A6NKG5	1358 aa		13.13	□□□□□ -0.31
CACNA1A-256	ENST00000637981	C5	P01031	1676 aa		13.13	□□□□□ -0.31
CACNA1A-256	ENST00000637981	RAPGEF4	Q8WZA2	1011 aa		13.13	□□□□□ -0.31
CACNA1A-256	ENST00000637981	SMG6	Q86US8	1419 aa	Known RBP	13.12	□□□□□ -0.31
CACNA1A-256	ENST00000637981	ATP10D	Q9P241	1426 aa		13.12	□□□□□ -0.31
CACNA1A-256	ENST00000637981	KIF20B	Q96Q89	1820 aa		13.12	□□□□□ -0.31
CACNA1A-256	ENST00000637981	ST20-MTHFS	A0A0A6YYL1	179 aa		13.12	□□□□□ -0.31
CACNA1A-256	ENST00000637981	TAT	P17735	454 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNA1A-256	ENST00000637981	CD2AP	Q9Y5K6	639 aa		13.12	□□□□□ -0.31
CACNA1A-256	ENST00000637981	PALLD	Q8WX93	1383 aa		13.11	□□□□□ -0.31
CACNA1A-256	ENST00000637981	HMGB2	P26583	209 aa	Known RBP	13.11	□□□□□ -0.31
CACNA1A-256	ENST00000637981	FLAD1	Q8NFF5	587 aa		13.11	□□□□□ -0.31
CACNA1A-256	ENST00000637981	PCDH11X	Q9BZA7	1347 aa		13.1	□□□□□ -0.31
CACNA1A-256	ENST00000637981	PCDH11Y	Q9BZA8	1340 aa		13.1	□□□□□ -0.31
CACNA1A-256	ENST00000637981	C1QBP	Q07021	282 aa	Known RBP	13.1	□□□□□ -0.31
CACNA1A-256	ENST00000637981	MPRIP	Q6WCQ1	1025 aa		13.1	□□□□□ -0.31
CACNA1A-256	ENST00000637981	GGNBP2	Q9H3C7	697 aa		13.1	□□□□□ -0.31
CACNA1A-256	ENST00000637981	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNA1A-256	ENST00000637981	TAF1L	Q8IZX4	1826 aa		13.09	□□□□□ -0.31
CACNA1A-256	ENST00000637981	FYB1	O15117	783 aa		13.09	□□□□□ -0.31
CACNA1A-256	ENST00000637981	CDCA8	Q53HL2	280 aa		13.09	□□□□□ -0.31
CACNA1A-256	ENST00000637981	TMF1	P82094	1093 aa		13.08	□□□□□ -0.32
CACNA1A-256	ENST00000637981	HSP90AB2P	Q58FF8	381 aa		13.08	□□□□□ -0.32
CACNA1A-256	ENST00000637981	ZNF526	Q8TF50	670 aa	Predicted RBP	13.08	□□□□□ -0.32
CACNA1A-256	ENST00000637981	AK7	Q96M32	723 aa		13.08	□□□□□ -0.32
CACNA1A-256	ENST00000637981	C4B	P0C0L5	1744 aa		13.07	□□□□□ -0.32
CACNA1A-256	ENST00000637981	ADCY9	O60503	1353 aa		13.07	□□□□□ -0.32
CACNA1A-256	ENST00000637981	INSR	P06213	1382 aa		13.07	□□□□□ -0.32
CACNA1A-256	ENST00000637981	ANKRD26	Q9UPS8	1709 aa		13.07	□□□□□ -0.32
CACNA1A-256	ENST00000637981	CEP350	Q5VT06	3117 aa		13.06	□□□□□ -0.32
CACNA1A-256	ENST00000637981	CYP27B1	O15528	508 aa		13.06	□□□□□ -0.32
CACNA1A-256	ENST00000637981	PHF14	O94880	888 aa		13.06	□□□□□ -0.32
CACNA1A-256	ENST00000637981	HSPA5	P11021	654 aa	Known RBP	13.06	□□□□□ -0.32
CACNA1A-256	ENST00000637981	AMIGO3	Q86WK7	504 aa		13.06	□□□□□ -0.32
CACNA1A-256	ENST00000637981	SMARCC1	Q92922	1105 aa	Predicted RBP	13.06	□□□□□ -0.32
CACNA1A-256	ENST00000637981	WWC3	Q9ULE0	1092 aa		13.06	□□□□□ -0.32
CACNA1A-256	ENST00000637981	FLT4	P35916	1363 aa		13.05	□□□□□ -0.32
CACNA1A-256	ENST00000637981	TOGARAM1	Q9Y4F4	1720 aa		13.05	□□□□□ -0.32
CACNA1A-256	ENST00000637981	HSPA6	P17066	643 aa		13.05	□□□□□ -0.32
CACNA1A-256	ENST00000637981	SMIM5	Q71RC9	77 aa		13.05	□□□□□ -0.32
CACNA1A-256	ENST00000637981	IGSF1	Q8N6C5	1336 aa		13.05	□□□□□ -0.32
CACNA1A-256	ENST00000637981	NSD3	Q9BZ95	1437 aa		13.04	□□□□□ -0.32
CACNA1A-256	ENST00000637981	ITGB4	P16144	1822 aa		13.04	□□□□□ -0.32
CACNA1A-256	ENST00000637981	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.04	□□□□□ -0.32
CACNA1A-256	ENST00000637981	PIGB	Q92521	554 aa		13.04	□□□□□ -0.32
CACNA1A-256	ENST00000637981	KIF24	Q5T7B8	1368 aa		13.04	□□□□□ -0.32
CACNA1A-256	ENST00000637981	UBR3	Q6ZT12	1888 aa		13.03	□□□□□ -0.32
CACNA1A-256	ENST00000637981	CNKSR2	Q8WXI2	1034 aa		13.03	□□□□□ -0.32
CACNA1A-256	ENST00000637981	RNF216	Q9NWF9	866 aa	Predicted RBP	13.03	□□□□□ -0.32
CACNA1A-256	ENST00000637981	PKD1L3	Q7Z443	1732 aa		13.02	□□□□□ -0.32
CACNA1A-256	ENST00000637981	SSFA2	P28290	1259 aa		13.02	□□□□□ -0.33
CACNA1A-256	ENST00000637981	LOC102724428	A0A0B4J2F2	783 aa		13.01	□□□□□ -0.33
CACNA1A-256	ENST00000637981	SIK1	P57059	783 aa		13.01	□□□□□ -0.33
CACNA1A-256	ENST00000637981	NKX1-1	Q15270	411 aa	Predicted RBP	13.01	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms