RNA–Protein interactions for RNA: ENST00000637842.1

RBMS3-220, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 1,458 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-220ENST00000637842 HMGB2P26583 209 aaKnown RBP13.49□□□□□ -0.25
RBMS3-220ENST00000637842 FLAD1Q8NFF5 587 aa13.49□□□□□ -0.25
RBMS3-220ENST00000637842 PCNTO95613 3336 aa13.49□□□□□ -0.25
RBMS3-220ENST00000637842 KAT6BQ8WYB5 2073 aa13.49□□□□□ -0.25
RBMS3-220ENST00000637842 ABCC6O95255 1503 aa13.49□□□□□ -0.25
RBMS3-220ENST00000637842 CCNL1Q9UK58 526 aaPredicted RBP13.48□□□□□ -0.25
RBMS3-220ENST00000637842 SRPK2P78362 688 aaKnown RBP13.48□□□□□ -0.25
RBMS3-220ENST00000637842 NLRP2Q9NX02 1062 aa13.48□□□□□ -0.25
RBMS3-220ENST00000637842 KDM2AQ9Y2K7 1162 aa13.48□□□□□ -0.25
RBMS3-220ENST00000637842 SYTL4Q96C24 671 aaPredicted RBP13.47□□□□□ -0.25
RBMS3-220ENST00000637842 STAC3Q96MF2 364 aa13.47□□□□□ -0.25
RBMS3-220ENST00000637842 TRPM1Q7Z4N2 1603 aa13.46□□□□□ -0.25
RBMS3-220ENST00000637842 SOX12O15370 315 aa13.46□□□□□ -0.25
RBMS3-220ENST00000637842 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
RBMS3-220ENST00000637842 PPARGC1BQ86YN6 1023 aaKnown RBP13.45□□□□□ -0.26
RBMS3-220ENST00000637842 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
RBMS3-220ENST00000637842 DCAF11Q8TEB1 546 aa13.44□□□□□ -0.26
RBMS3-220ENST00000637842 CABP1Q9NZU7 370 aa13.44□□□□□ -0.26
RBMS3-220ENST00000637842 TUBGCP6Q96RT7 1819 aa13.42□□□□□ -0.26
RBMS3-220ENST00000637842 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
RBMS3-220ENST00000637842 SMC1BQ8NDV3 1235 aa13.42□□□□□ -0.26
RBMS3-220ENST00000637842 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
RBMS3-220ENST00000637842 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
RBMS3-220ENST00000637842 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
RBMS3-220ENST00000637842 ERBB3P21860 1342 aa13.41□□□□□ -0.26
RBMS3-220ENST00000637842 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
RBMS3-220ENST00000637842 BCS1LQ9Y276 419 aa13.4□□□□□ -0.26
RBMS3-220ENST00000637842 CICQ96RK0 1608 aaPredicted RBP13.4□□□□□ -0.27
RBMS3-220ENST00000637842 USP47Q96K76 1375 aa13.39□□□□□ -0.27
RBMS3-220ENST00000637842 FAM161AQ3B820 660 aa13.39□□□□□ -0.27
RBMS3-220ENST00000637842 PIAS4Q8N2W9 510 aaPredicted RBP13.39□□□□□ -0.27
RBMS3-220ENST00000637842 RRAGCQ9HB90 399 aa13.39□□□□□ -0.27
RBMS3-220ENST00000637842 TTC21BQ7Z4L5 1316 aa13.38□□□□□ -0.27
RBMS3-220ENST00000637842 TULP1O00294 542 aaPredicted RBP13.38□□□□□ -0.27
RBMS3-220ENST00000637842 C9orf131Q5VYM1 1079 aa13.38□□□□□ -0.27
RBMS3-220ENST00000637842 RGPD5Q99666 1765 aa13.38□□□□□ -0.27
RBMS3-220ENST00000637842 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
RBMS3-220ENST00000637842 TGFB2P61812 414 aa13.37□□□□□ -0.27
RBMS3-220ENST00000637842 ANKRD24Q8TF21 1146 aa13.37□□□□□ -0.27
RBMS3-220ENST00000637842 PRDM10Q9NQV6 1147 aa13.37□□□□□ -0.27
RBMS3-220ENST00000637842 TTC21AQ8NDW8 1320 aa13.37□□□□□ -0.27
RBMS3-220ENST00000637842 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
RBMS3-220ENST00000637842 NSD2O96028 1365 aa13.36□□□□□ -0.27
RBMS3-220ENST00000637842 LY75O60449 1722 aa13.35□□□□□ -0.27
RBMS3-220ENST00000637842 AK7Q96M32 723 aa13.35□□□□□ -0.27
RBMS3-220ENST00000637842 PIK3C2AO00443 1686 aa13.34□□□□□ -0.27
RBMS3-220ENST00000637842 FCHSD2O94868 740 aa13.34□□□□□ -0.27
RBMS3-220ENST00000637842 A0A0G2JLW4 131 aa13.33□□□□□ -0.28
RBMS3-220ENST00000637842 MLLT1Q03111 559 aaPredicted RBP13.33□□□□□ -0.28
RBMS3-220ENST00000637842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.32□□□□□ -0.28
RBMS3-220ENST00000637842 PHF14O94880 888 aa13.32□□□□□ -0.28
RBMS3-220ENST00000637842 ZCRB1Q8TBF4 217 aaKnown RBP13.32□□□□□ -0.28
RBMS3-220ENST00000637842 NFAT5O94916 1531 aa13.32□□□□□ -0.28
RBMS3-220ENST00000637842 KCPQ6ZWJ8 1503 aa13.32□□□□□ -0.28
RBMS3-220ENST00000637842 CENPJQ9HC77 1338 aaPredicted RBP13.32□□□□□ -0.28
RBMS3-220ENST00000637842 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
RBMS3-220ENST00000637842 PXDNLA1KZ92 1463 aa13.31□□□□□ -0.28
RBMS3-220ENST00000637842 FOXN1O15353 648 aa13.3□□□□□ -0.28
RBMS3-220ENST00000637842 SSFA2P28290 1259 aa13.3□□□□□ -0.28
RBMS3-220ENST00000637842 RNF181Q9P0P0 153 aa13.3□□□□□ -0.28
RBMS3-220ENST00000637842 VEGFAP15692 232 aaPredicted RBP13.29□□□□□ -0.28
RBMS3-220ENST00000637842 CTCFP49711 727 aaPredicted RBP13.29□□□□□ -0.28
RBMS3-220ENST00000637842 ABHD8Q96I13 439 aa13.29□□□□□ -0.28
RBMS3-220ENST00000637842 MMP10P09238 476 aa13.29□□□□□ -0.28
RBMS3-220ENST00000637842 SMIM5Q71RC9 77 aa13.29□□□□□ -0.28
RBMS3-220ENST00000637842 AIDAQ96BJ3 306 aa13.29□□□□□ -0.28
RBMS3-220ENST00000637842 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
RBMS3-220ENST00000637842 DPEP1P16444 411 aa13.28□□□□□ -0.28
RBMS3-220ENST00000637842 AMIGO3Q86WK7 504 aa13.28□□□□□ -0.28
RBMS3-220ENST00000637842 PALLDQ8WX93 1383 aa13.27□□□□□ -0.28
RBMS3-220ENST00000637842 QRICH2Q9H0J4 1663 aa13.27□□□□□ -0.28
RBMS3-220ENST00000637842 RGS19P49795 217 aa13.27□□□□□ -0.29
RBMS3-220ENST00000637842 SMARCC1Q92922 1105 aaPredicted RBP13.27□□□□□ -0.29
RBMS3-220ENST00000637842 EVC2Q86UK5 1308 aa13.27□□□□□ -0.29
RBMS3-220ENST00000637842 PIM2Q9P1W9 311 aa13.26□□□□□ -0.29
RBMS3-220ENST00000637842 MKRN1Q9UHC7 482 aaKnown RBP13.26□□□□□ -0.29
RBMS3-220ENST00000637842 USP31Q70CQ4 1352 aa13.26□□□□□ -0.29
RBMS3-220ENST00000637842 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
RBMS3-220ENST00000637842 IP6K1Q92551 441 aa13.25□□□□□ -0.29
RBMS3-220ENST00000637842 LTV1Q96GA3 475 aaPredicted RBP13.25□□□□□ -0.29
RBMS3-220ENST00000637842 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
RBMS3-220ENST00000637842 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
RBMS3-220ENST00000637842 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
RBMS3-220ENST00000637842 C5P01031 1676 aa13.25□□□□□ -0.29
RBMS3-220ENST00000637842 USP54Q70EL1 1684 aa13.25□□□□□ -0.29
RBMS3-220ENST00000637842 DOT1LQ8TEK3 1739 aa13.24□□□□□ -0.29
RBMS3-220ENST00000637842 NBPF1Q3BBV0 1214 aa13.24□□□□□ -0.29
RBMS3-220ENST00000637842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.29
RBMS3-220ENST00000637842 ZC3H4Q9UPT8 1303 aaKnown RBP13.24□□□□□ -0.29
RBMS3-220ENST00000637842 TPRNQ4KMQ1 711 aa13.23□□□□□ -0.29
RBMS3-220ENST00000637842 DALRD3Q5D0E6 543 aaKnown RBP13.23□□□□□ -0.29
RBMS3-220ENST00000637842 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
RBMS3-220ENST00000637842 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
RBMS3-220ENST00000637842 GLTPD2A6NH11 291 aa13.23□□□□□ -0.29
RBMS3-220ENST00000637842 LBX1P52954 281 aa13.23□□□□□ -0.29
RBMS3-220ENST00000637842 TNRC6CQ9HCJ0 1690 aaKnown RBP13.22□□□□□ -0.29
RBMS3-220ENST00000637842 CGNL1Q0VF96 1302 aa13.22□□□□□ -0.29
RBMS3-220ENST00000637842 CCDC85CA6NKD9 419 aa13.22□□□□□ -0.29
RBMS3-220ENST00000637842 KCNA3P22001 575 aa13.22□□□□□ -0.29
RBMS3-220ENST00000637842 TMF1P82094 1093 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms