RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 RGPD2P0DJD1 1756 aa19.49■□□□□ 0.71
SCN8A-214ENST00000637709 CHL1O00533 1208 aa19.48■□□□□ 0.71
SCN8A-214ENST00000637709 NBR1Q14596 966 aa19.48■□□□□ 0.71
SCN8A-214ENST00000637709 TSPYL4Q9UJ04 414 aa19.48■□□□□ 0.71
SCN8A-214ENST00000637709 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
SCN8A-214ENST00000637709 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
SCN8A-214ENST00000637709 KDRP35968 1356 aa19.46■□□□□ 0.71
SCN8A-214ENST00000637709 CRB1P82279 1406 aa19.46■□□□□ 0.71
SCN8A-214ENST00000637709 NWD1Q149M9 1564 aa19.45■□□□□ 0.7
SCN8A-214ENST00000637709 ZBTB7BO15156 539 aaPredicted RBP19.44■□□□□ 0.7
SCN8A-214ENST00000637709 ZC3H6P61129 1189 aaKnown RBP19.43■□□□□ 0.7
SCN8A-214ENST00000637709 G2E3Q7L622 706 aa19.43■□□□□ 0.7
SCN8A-214ENST00000637709 LNPKQ9C0E8 428 aa19.43■□□□□ 0.7
SCN8A-214ENST00000637709 GCP02774 474 aa19.42■□□□□ 0.7
SCN8A-214ENST00000637709 SLC4A2P04920 1241 aa19.42■□□□□ 0.7
SCN8A-214ENST00000637709 IL17REQ8NFR9 667 aa19.42■□□□□ 0.7
SCN8A-214ENST00000637709 F6X3S4 739 aa19.42■□□□□ 0.7
SCN8A-214ENST00000637709 KRT28Q7Z3Y7 464 aa19.42■□□□□ 0.7
SCN8A-214ENST00000637709 CABLES1Q8TDN4 633 aa19.42■□□□□ 0.7
SCN8A-214ENST00000637709 AXIN2Q9Y2T1 843 aa19.42■□□□□ 0.7
SCN8A-214ENST00000637709 STRCP1A6NGW2 1772 aa19.41■□□□□ 0.7
SCN8A-214ENST00000637709 GNAT3A8MTJ3 354 aa19.41■□□□□ 0.7
SCN8A-214ENST00000637709 GAS2L2Q8NHY3 880 aa19.41■□□□□ 0.7
SCN8A-214ENST00000637709 IP6K1Q92551 441 aa19.41■□□□□ 0.7
SCN8A-214ENST00000637709 NFAT5O94916 1531 aa19.4■□□□□ 0.7
SCN8A-214ENST00000637709 ABCC4O15439 1325 aa19.4■□□□□ 0.7
SCN8A-214ENST00000637709 SLC4A10Q6U841 1118 aa19.4■□□□□ 0.7
SCN8A-214ENST00000637709 SIRT2Q8IXJ6 389 aa19.4■□□□□ 0.7
SCN8A-214ENST00000637709 ZNF428Q96B54 188 aa19.4■□□□□ 0.7
SCN8A-214ENST00000637709 TMEM94Q12767 1356 aa19.39■□□□□ 0.7
SCN8A-214ENST00000637709 AAMPQ13685 434 aa19.39■□□□□ 0.69
SCN8A-214ENST00000637709 LGR6Q9HBX8 967 aa19.39■□□□□ 0.69
SCN8A-214ENST00000637709 BRPF1P55201 1214 aaPredicted RBP19.39■□□□□ 0.69
SCN8A-214ENST00000637709 HDAC1Q13547 482 aaPredicted RBP19.39■□□□□ 0.69
SCN8A-214ENST00000637709 C19orf44Q9H6X5 657 aa19.38■□□□□ 0.69
SCN8A-214ENST00000637709 MSH6P52701 1360 aa19.37■□□□□ 0.69
SCN8A-214ENST00000637709 RGPD5Q99666 1765 aa19.37■□□□□ 0.69
SCN8A-214ENST00000637709 APBB1O00213 710 aa19.36■□□□□ 0.69
SCN8A-214ENST00000637709 ATF3P18847 181 aa19.36■□□□□ 0.69
SCN8A-214ENST00000637709 ARHGAP45Q92619 1136 aa19.36■□□□□ 0.69
SCN8A-214ENST00000637709 VIRMAQ69YN4 1812 aaKnown RBP19.36■□□□□ 0.69
SCN8A-214ENST00000637709 C1orf167Q5SNV9 1468 aa19.36■□□□□ 0.69
SCN8A-214ENST00000637709 MPRIPQ6WCQ1 1025 aa19.36■□□□□ 0.69
SCN8A-214ENST00000637709 ANKRD45Q5TZF3 282 aa19.35■□□□□ 0.69
SCN8A-214ENST00000637709 MAP3K5Q99683 1374 aa19.35■□□□□ 0.69
SCN8A-214ENST00000637709 RGS12O14924 1447 aa19.35■□□□□ 0.69
SCN8A-214ENST00000637709 KCNQ3O43525 872 aa19.34■□□□□ 0.69
SCN8A-214ENST00000637709 SMC5Q8IY18 1101 aa19.34■□□□□ 0.69
SCN8A-214ENST00000637709 API5Q9BZZ5 524 aaKnown RBP19.34■□□□□ 0.69
SCN8A-214ENST00000637709 USP19O94966 1318 aa19.34■□□□□ 0.69
SCN8A-214ENST00000637709 USP54Q70EL1 1684 aa19.34■□□□□ 0.69
SCN8A-214ENST00000637709 KCNH5Q8NCM2 988 aa19.34■□□□□ 0.69
SCN8A-214ENST00000637709 ANKRD24Q8TF21 1146 aa19.34■□□□□ 0.69
SCN8A-214ENST00000637709 ARHGEF25Q86VW2 580 aa19.33■□□□□ 0.69
SCN8A-214ENST00000637709 MEIS3Q99687 375 aa19.33■□□□□ 0.69
SCN8A-214ENST00000637709 CHRNA2Q15822 529 aa19.32■□□□□ 0.68
SCN8A-214ENST00000637709 EIF2S2P20042 333 aaKnown RBP19.32■□□□□ 0.68
SCN8A-214ENST00000637709 ZNF530Q6P9A1 599 aaPredicted RBP19.31■□□□□ 0.68
SCN8A-214ENST00000637709 KIAA0232Q92628 1395 aa19.31■□□□□ 0.68
SCN8A-214ENST00000637709 RTL1A6NKG5 1358 aa19.3■□□□□ 0.68
SCN8A-214ENST00000637709 ANXA1P04083 346 aa19.3■□□□□ 0.68
SCN8A-214ENST00000637709 TRPM3Q9HCF6 1732 aaPredicted RBP19.3■□□□□ 0.68
SCN8A-214ENST00000637709 KIF24Q5T7B8 1368 aa19.3■□□□□ 0.68
SCN8A-214ENST00000637709 NUCB1Q02818 461 aa19.3■□□□□ 0.68
SCN8A-214ENST00000637709 CHD1LQ86WJ1 897 aa19.3■□□□□ 0.68
SCN8A-214ENST00000637709 PXDNQ92626 1479 aa19.29■□□□□ 0.68
SCN8A-214ENST00000637709 TAF7Q15545 349 aaPredicted RBP19.29■□□□□ 0.68
SCN8A-214ENST00000637709 MFAP1P55081 439 aaKnown RBP19.28■□□□□ 0.68
SCN8A-214ENST00000637709 FKBP5Q13451 457 aaPredicted RBP19.28■□□□□ 0.68
SCN8A-214ENST00000637709 MST1RQ04912 1400 aa19.28■□□□□ 0.68
SCN8A-214ENST00000637709 PHAXQ9H814 394 aaKnown RBP19.28■□□□□ 0.68
SCN8A-214ENST00000637709 INTS3Q68E01 1043 aaKnown RBP19.27■□□□□ 0.68
SCN8A-214ENST00000637709 STK31Q9BXU1 1019 aa19.27■□□□□ 0.68
SCN8A-214ENST00000637709 LRRC37A3O60309 1634 aa19.27■□□□□ 0.68
SCN8A-214ENST00000637709 C16orf71Q8IYS4 520 aaPredicted RBP19.27■□□□□ 0.67
SCN8A-214ENST00000637709 SMARCA5O60264 1052 aaPredicted RBP19.26■□□□□ 0.67
SCN8A-214ENST00000637709 NLRP2Q9NX02 1062 aa19.26■□□□□ 0.67
SCN8A-214ENST00000637709 MED1Q15648 1581 aaPredicted RBP19.25■□□□□ 0.67
SCN8A-214ENST00000637709 KDM4FA0A1W2PPD8 638 aa19.25■□□□□ 0.67
SCN8A-214ENST00000637709 PRAMEF22A3QJZ6 481 aa19.25■□□□□ 0.67
SCN8A-214ENST00000637709 FLIIQ13045 1269 aa19.25■□□□□ 0.67
SCN8A-214ENST00000637709 DAXXQ9UER7 740 aaPredicted RBP19.25■□□□□ 0.67
SCN8A-214ENST00000637709 OTUD7AQ8TE49 926 aaPredicted RBP19.24■□□□□ 0.67
SCN8A-214ENST00000637709 ZNF335Q9H4Z2 1342 aaPredicted RBP19.24■□□□□ 0.67
SCN8A-214ENST00000637709 HTATSF1O43719 755 aaKnown RBP19.24■□□□□ 0.67
SCN8A-214ENST00000637709 HDGFL1Q5TGJ6 251 aa19.24■□□□□ 0.67
SCN8A-214ENST00000637709 DDRGK1Q96HY6 314 aa19.24■□□□□ 0.67
SCN8A-214ENST00000637709 PTPRCP08575 1304 aa19.23■□□□□ 0.67
SCN8A-214ENST00000637709 SLIT3O75094 1523 aa19.23■□□□□ 0.67
SCN8A-214ENST00000637709 TEFQ10587 303 aa19.23■□□□□ 0.67
SCN8A-214ENST00000637709 BTBD11A6QL63 1104 aa19.23■□□□□ 0.67
SCN8A-214ENST00000637709 FAM208AQ9UK61 1670 aaKnown RBP19.22■□□□□ 0.67
SCN8A-214ENST00000637709 ATP10DQ9P241 1426 aa19.22■□□□□ 0.67
SCN8A-214ENST00000637709 CSB-PGBD3P0DP91 1061 aa19.22■□□□□ 0.67
SCN8A-214ENST00000637709 HAP1P54257 671 aaPredicted RBP19.22■□□□□ 0.67
SCN8A-214ENST00000637709 CCDC30Q5VVM6 783 aa19.22■□□□□ 0.67
SCN8A-214ENST00000637709 CEP85Q6P2H3 762 aa19.22■□□□□ 0.67
SCN8A-214ENST00000637709 C1orf141Q5JVX7 400 aa19.22■□□□□ 0.67
SCN8A-214ENST00000637709 ERBB3P21860 1342 aa19.21■□□□□ 0.67
SCN8A-214ENST00000637709 CHPF2Q9P2E5 772 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms