RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 NLRP2Q9NX02 1062 aa21.84■■□□□ 1.09
CLCN2-220ENST00000637538 LRRC37A3O60309 1634 aa21.84■■□□□ 1.09
CLCN2-220ENST00000637538 POTEAQ6S8J7 498 aa21.83■■□□□ 1.09
CLCN2-220ENST00000637538 NGLY1Q96IV0 654 aa21.83■■□□□ 1.09
CLCN2-220ENST00000637538 MYH16Q9H6N6 1097 aa21.83■■□□□ 1.09
CLCN2-220ENST00000637538 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
CLCN2-220ENST00000637538 ZNF853P0CG23 659 aa21.82■■□□□ 1.08
CLCN2-220ENST00000637538 CSB-PGBD3P0DP91 1061 aa21.82■■□□□ 1.08
CLCN2-220ENST00000637538 CALD1Q05682 793 aaKnown RBP21.82■■□□□ 1.08
CLCN2-220ENST00000637538 THUMPD2Q9BTF0 503 aaKnown RBP21.82■■□□□ 1.08
CLCN2-220ENST00000637538 RCAN3Q9UKA8 241 aa21.81■■□□□ 1.08
CLCN2-220ENST00000637538 AFF2P51816 1311 aa21.81■■□□□ 1.08
CLCN2-220ENST00000637538 FANCIQ9NVI1 1328 aa21.81■■□□□ 1.08
CLCN2-220ENST00000637538 MEGF6O75095 1541 aa21.81■■□□□ 1.08
CLCN2-220ENST00000637538 MAP3K5Q99683 1374 aa21.81■■□□□ 1.08
CLCN2-220ENST00000637538 FNBP4Q8N3X1 1017 aaPredicted RBP21.8■■□□□ 1.08
CLCN2-220ENST00000637538 PLCH1Q4KWH8 1693 aa21.8■■□□□ 1.08
CLCN2-220ENST00000637538 CRB1P82279 1406 aa21.8■■□□□ 1.08
CLCN2-220ENST00000637538 AMOTQ4VCS5 1084 aa21.8■■□□□ 1.08
CLCN2-220ENST00000637538 PKD1L3Q7Z443 1732 aa21.79■■□□□ 1.08
CLCN2-220ENST00000637538 DCTN1Q14203 1278 aa21.79■■□□□ 1.08
CLCN2-220ENST00000637538 IFT57Q9NWB7 429 aa21.79■■□□□ 1.08
CLCN2-220ENST00000637538 PLEKHO1Q53GL0 409 aaPredicted RBP21.78■■□□□ 1.08
CLCN2-220ENST00000637538 CARD10Q9BWT7 1032 aa21.78■■□□□ 1.08
CLCN2-220ENST00000637538 NRAPQ86VF7 1730 aa21.78■■□□□ 1.08
CLCN2-220ENST00000637538 GNAT3A8MTJ3 354 aa21.77■■□□□ 1.08
CLCN2-220ENST00000637538 MCM10Q7L590 875 aa21.77■■□□□ 1.08
CLCN2-220ENST00000637538 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.08
CLCN2-220ENST00000637538 BTG4Q9NY30 223 aa21.77■■□□□ 1.08
CLCN2-220ENST00000637538 ADAMTS7Q9UKP4 1686 aa21.77■■□□□ 1.07
CLCN2-220ENST00000637538 LARP1Q6PKG0 1096 aaKnown RBP21.76■■□□□ 1.07
CLCN2-220ENST00000637538 CFAP44Q96MT7 982 aa21.76■■□□□ 1.07
CLCN2-220ENST00000637538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.76■■□□□ 1.07
CLCN2-220ENST00000637538 OVOS2A0A0G2JMS6 1433 aa21.76■■□□□ 1.07
CLCN2-220ENST00000637538 PARP4Q9UKK3 1724 aaKnown RBP21.76■■□□□ 1.07
CLCN2-220ENST00000637538 GNAI1P63096 354 aa21.75■■□□□ 1.07
CLCN2-220ENST00000637538 RAPGEF4Q8WZA2 1011 aa21.75■■□□□ 1.07
CLCN2-220ENST00000637538 TATP17735 454 aaPredicted RBP21.75■■□□□ 1.07
CLCN2-220ENST00000637538 TOM1L2Q6ZVM7 507 aa21.75■■□□□ 1.07
CLCN2-220ENST00000637538 CEMIPQ8WUJ3 1361 aa21.75■■□□□ 1.07
CLCN2-220ENST00000637538 NWD2Q9ULI1 1742 aa21.75■■□□□ 1.07
CLCN2-220ENST00000637538 SLIT2O94813 1529 aa21.74■■□□□ 1.07
CLCN2-220ENST00000637538 AKAP4Q5JQC9 854 aa21.74■■□□□ 1.07
CLCN2-220ENST00000637538 ZNF530Q6P9A1 599 aaPredicted RBP21.74■■□□□ 1.07
CLCN2-220ENST00000637538 IL17REQ8NFR9 667 aa21.74■■□□□ 1.07
CLCN2-220ENST00000637538 RTF1Q92541 710 aaKnown RBP21.74■■□□□ 1.07
CLCN2-220ENST00000637538 USP21Q9UK80 565 aa21.74■■□□□ 1.07
CLCN2-220ENST00000637538 CHL1O00533 1208 aa21.73■■□□□ 1.07
CLCN2-220ENST00000637538 EVA1CP58658 441 aa21.73■■□□□ 1.07
CLCN2-220ENST00000637538 STRN4Q9NRL3 753 aa21.73■■□□□ 1.07
CLCN2-220ENST00000637538 QTRT2Q9H974 415 aaKnown RBP21.72■■□□□ 1.07
CLCN2-220ENST00000637538 MBIPQ9NS73 344 aa21.72■■□□□ 1.07
CLCN2-220ENST00000637538 CT47B1P0C2W7 299 aaPredicted RBP21.71■■□□□ 1.07
CLCN2-220ENST00000637538 EXOSC9Q06265 439 aaKnown RBP21.7■■□□□ 1.07
CLCN2-220ENST00000637538 BCL9LQ86UU0 1499 aa21.7■■□□□ 1.06
CLCN2-220ENST00000637538 VIRMAQ69YN4 1812 aaKnown RBP21.7■■□□□ 1.06
CLCN2-220ENST00000637538 RRP1P56182 461 aaKnown RBP21.7■■□□□ 1.06
CLCN2-220ENST00000637538 SPG7Q9UQ90 795 aa21.7■■□□□ 1.06
CLCN2-220ENST00000637538 RXRBP28702 533 aa21.69■■□□□ 1.06
CLCN2-220ENST00000637538 TRPC5Q9UL62 973 aaPredicted RBP21.69■■□□□ 1.06
CLCN2-220ENST00000637538 LAS1LQ9Y4W2 734 aaKnown RBP21.69■■□□□ 1.06
CLCN2-220ENST00000637538 DISP2A7MBM2 1401 aa21.69■■□□□ 1.06
CLCN2-220ENST00000637538 SHANK3Q9BYB0 1731 aa21.68■■□□□ 1.06
CLCN2-220ENST00000637538 UNC5CLQ8IV45 518 aa21.68■■□□□ 1.06
CLCN2-220ENST00000637538 WNK3Q9BYP7 1800 aa21.68■■□□□ 1.06
CLCN2-220ENST00000637538 NEFLP07196 543 aa21.67■■□□□ 1.06
CLCN2-220ENST00000637538 C1orf141Q5JVX7 400 aa21.67■■□□□ 1.06
CLCN2-220ENST00000637538 LGR6Q9HBX8 967 aa21.67■■□□□ 1.06
CLCN2-220ENST00000637538 IL2RBP14784 551 aa21.66■■□□□ 1.06
CLCN2-220ENST00000637538 PHKG2P15735 406 aa21.66■■□□□ 1.06
CLCN2-220ENST00000637538 RARSP54136 660 aaKnown RBP21.66■■□□□ 1.06
CLCN2-220ENST00000637538 RBM6P78332 1123 aaKnown RBP21.66■■□□□ 1.06
CLCN2-220ENST00000637538 BABAM1Q9NWV8 329 aa21.66■■□□□ 1.06
CLCN2-220ENST00000637538 SIPA1L3O60292 1781 aaPredicted RBP21.66■■□□□ 1.06
CLCN2-220ENST00000637538 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
CLCN2-220ENST00000637538 RNMTO43148 476 aaKnown RBP21.65■■□□□ 1.06
CLCN2-220ENST00000637538 FKBP8Q14318 412 aa21.65■■□□□ 1.06
CLCN2-220ENST00000637538 KDM6AO15550 1401 aaPredicted RBP21.65■■□□□ 1.06
CLCN2-220ENST00000637538 ATRNO75882 1429 aa21.65■■□□□ 1.06
CLCN2-220ENST00000637538 CYP27B1O15528 508 aa21.65■■□□□ 1.06
CLCN2-220ENST00000637538 KDM3BQ7LBC6 1761 aa21.63■■□□□ 1.05
CLCN2-220ENST00000637538 MRC1P22897 1456 aa21.63■■□□□ 1.05
CLCN2-220ENST00000637538 BCAR3O75815 825 aa21.63■■□□□ 1.05
CLCN2-220ENST00000637538 TAF7Q15545 349 aaPredicted RBP21.63■■□□□ 1.05
CLCN2-220ENST00000637538 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
CLCN2-220ENST00000637538 IFNL2Q8IZJ0 200 aa21.63■■□□□ 1.05
CLCN2-220ENST00000637538 ZCRB1Q8TBF4 217 aaKnown RBP21.62■■□□□ 1.05
CLCN2-220ENST00000637538 SPATA31A1Q5TZJ5 1347 aa21.62■■□□□ 1.05
CLCN2-220ENST00000637538 VAMP4O75379 141 aa21.61■■□□□ 1.05
CLCN2-220ENST00000637538 TSPYL6Q8N831 410 aa21.61■■□□□ 1.05
CLCN2-220ENST00000637538 C8orf58Q8NAV2 365 aa21.61■■□□□ 1.05
CLCN2-220ENST00000637538 ZNF428Q96B54 188 aa21.61■■□□□ 1.05
CLCN2-220ENST00000637538 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.61■■□□□ 1.05
CLCN2-220ENST00000637538 PCDH11XQ9BZA7 1347 aa21.61■■□□□ 1.05
CLCN2-220ENST00000637538 PCDH11YQ9BZA8 1340 aa21.61■■□□□ 1.05
CLCN2-220ENST00000637538 IRX6P78412 446 aaPredicted RBP21.6■■□□□ 1.05
CLCN2-220ENST00000637538 VPS72Q15906 364 aa21.6■■□□□ 1.05
CLCN2-220ENST00000637538 GJD4Q96KN9 370 aaPredicted RBP21.6■■□□□ 1.05
CLCN2-220ENST00000637538 MIS18AQ9NYP9 233 aa21.6■■□□□ 1.05
CLCN2-220ENST00000637538 TSPYL4Q9UJ04 414 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms