RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 FAM83GA6ND36 823 aa18.87■□□□□ 0.61
CLN5-218ENST00000637397 CAMK4Q16566 473 aa18.87■□□□□ 0.61
CLN5-218ENST00000637397 OLFM4Q6UX06 510 aa18.87■□□□□ 0.61
CLN5-218ENST00000637397 TEX14Q8IWB6 1497 aa18.87■□□□□ 0.61
CLN5-218ENST00000637397 LARP6Q9BRS8 491 aaKnown RBP18.87■□□□□ 0.61
CLN5-218ENST00000637397 PZPP20742 1482 aa18.87■□□□□ 0.61
CLN5-218ENST00000637397 PLEKHO1Q53GL0 409 aaPredicted RBP18.87■□□□□ 0.61
CLN5-218ENST00000637397 FILIP1Q7Z7B0 1213 aa18.87■□□□□ 0.61
CLN5-218ENST00000637397 IPO7O95373 1038 aaKnown RBP18.87■□□□□ 0.61
CLN5-218ENST00000637397 TTC22Q5TAA0 569 aa18.87■□□□□ 0.61
CLN5-218ENST00000637397 CARD14Q9BXL6 1004 aa18.87■□□□□ 0.61
CLN5-218ENST00000637397 IL16Q14005 1332 aa18.86■□□□□ 0.61
CLN5-218ENST00000637397 TSHZ3Q63HK5 1081 aa18.86■□□□□ 0.61
CLN5-218ENST00000637397 ANKRD20A12PQ8NF67 263 aa18.86■□□□□ 0.61
CLN5-218ENST00000637397 ZNF396Q96N95 335 aaPredicted RBP18.86■□□□□ 0.61
CLN5-218ENST00000637397 PDCL3Q9H2J4 239 aa18.86■□□□□ 0.61
CLN5-218ENST00000637397 ZSCAN23Q3MJ62 389 aa18.86■□□□□ 0.61
CLN5-218ENST00000637397 MAP3K11Q16584 847 aa18.85■□□□□ 0.61
CLN5-218ENST00000637397 IDI1Q13907 227 aa18.85■□□□□ 0.61
CLN5-218ENST00000637397 CCDC183Q5T5S1 534 aa18.85■□□□□ 0.61
CLN5-218ENST00000637397 ZNF530Q6P9A1 599 aaPredicted RBP18.85■□□□□ 0.61
CLN5-218ENST00000637397 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
CLN5-218ENST00000637397 ATP2B1P20020 1258 aa18.84■□□□□ 0.61
CLN5-218ENST00000637397 KIF1BPQ96EK5 621 aa18.84■□□□□ 0.61
CLN5-218ENST00000637397 PRPF40BQ6NWY9 871 aaKnown RBP18.84■□□□□ 0.61
CLN5-218ENST00000637397 SNX21Q969T3 373 aa18.84■□□□□ 0.61
CLN5-218ENST00000637397 PCMTD1Q96MG8 357 aaPredicted RBP18.84■□□□□ 0.61
CLN5-218ENST00000637397 POLR3AO14802 1390 aaPredicted RBP18.84■□□□□ 0.61
CLN5-218ENST00000637397 NSD2O96028 1365 aa18.84■□□□□ 0.61
CLN5-218ENST00000637397 SLC26A8Q96RN1 970 aa18.84■□□□□ 0.61
CLN5-218ENST00000637397 MARCH6O60337 910 aa18.83■□□□□ 0.61
CLN5-218ENST00000637397 NUP160Q12769 1436 aa18.83■□□□□ 0.6
CLN5-218ENST00000637397 SDSP20132 328 aa18.83■□□□□ 0.6
CLN5-218ENST00000637397 PDCL2Q8N4E4 241 aa18.83■□□□□ 0.6
CLN5-218ENST00000637397 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
CLN5-218ENST00000637397 ERICH2A1L162 156 aa18.82■□□□□ 0.6
CLN5-218ENST00000637397 LRRFIP2Q9Y608 721 aaKnown RBP18.82■□□□□ 0.6
CLN5-218ENST00000637397 DDX11Q96FC9 970 aa18.82■□□□□ 0.6
CLN5-218ENST00000637397 PIK3C2GO75747 1445 aa18.82■□□□□ 0.6
CLN5-218ENST00000637397 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
CLN5-218ENST00000637397 CCDC70Q6NSX1 233 aa18.82■□□□□ 0.6
CLN5-218ENST00000637397 PRDM10Q9NQV6 1147 aa18.82■□□□□ 0.6
CLN5-218ENST00000637397 GLRX3O76003 335 aaKnown RBP18.81■□□□□ 0.6
CLN5-218ENST00000637397 SMC5Q8IY18 1101 aa18.81■□□□□ 0.6
CLN5-218ENST00000637397 CTTNBP2Q8WZ74 1663 aa18.81■□□□□ 0.6
CLN5-218ENST00000637397 GNAT3A8MTJ3 354 aa18.81■□□□□ 0.6
CLN5-218ENST00000637397 FYB1O15117 783 aa18.81■□□□□ 0.6
CLN5-218ENST00000637397 ATP10BO94823 1461 aa18.81■□□□□ 0.6
CLN5-218ENST00000637397 ARHGAP45Q92619 1136 aa18.81■□□□□ 0.6
CLN5-218ENST00000637397 UBE2Q2Q8WVN8 375 aa18.8■□□□□ 0.6
CLN5-218ENST00000637397 CFAP45Q9UL16 551 aa18.8■□□□□ 0.6
CLN5-218ENST00000637397 ARHGEF12Q9NZN5 1544 aa18.8■□□□□ 0.6
CLN5-218ENST00000637397 DHX16O60231 1041 aaKnown RBP18.8■□□□□ 0.6
CLN5-218ENST00000637397 C16orf71Q8IYS4 520 aaPredicted RBP18.8■□□□□ 0.6
CLN5-218ENST00000637397 TMX3Q96JJ7 454 aa18.8■□□□□ 0.6
CLN5-218ENST00000637397 LIMCH1Q9UPQ0 1083 aa18.8■□□□□ 0.6
CLN5-218ENST00000637397 MYL6BP14649 208 aa18.8■□□□□ 0.6
CLN5-218ENST00000637397 EVA1CP58658 441 aa18.8■□□□□ 0.6
CLN5-218ENST00000637397 TTLL5Q6EMB2 1281 aa18.8■□□□□ 0.6
CLN5-218ENST00000637397 ZBTB40Q9NUA8 1239 aa18.79■□□□□ 0.6
CLN5-218ENST00000637397 RAB3GAP1Q15042 981 aa18.79■□□□□ 0.6
CLN5-218ENST00000637397 SPATA31E1Q6ZUB1 1445 aa18.79■□□□□ 0.6
CLN5-218ENST00000637397 RRAGDQ9NQL2 400 aaPredicted RBP18.79■□□□□ 0.6
CLN5-218ENST00000637397 SERPINC1P01008 464 aa18.79■□□□□ 0.6
CLN5-218ENST00000637397 UHRF1BP1Q6BDS2 1440 aa18.79■□□□□ 0.6
CLN5-218ENST00000637397 CBX1P83916 185 aa18.79■□□□□ 0.6
CLN5-218ENST00000637397 HSP90B2PQ58FF3 399 aa18.79■□□□□ 0.6
CLN5-218ENST00000637397 ESCO1Q5FWF5 840 aa18.79■□□□□ 0.6
CLN5-218ENST00000637397 MEIS3Q99687 375 aa18.79■□□□□ 0.6
CLN5-218ENST00000637397 SPG7Q9UQ90 795 aa18.79■□□□□ 0.6
CLN5-218ENST00000637397 CCDC66A2RUB6 948 aa18.78■□□□□ 0.6
CLN5-218ENST00000637397 COL17A1Q9UMD9 1497 aaPredicted RBP18.78■□□□□ 0.6
CLN5-218ENST00000637397 PTPRCP08575 1304 aa18.78■□□□□ 0.6
CLN5-218ENST00000637397 RAB11FIP3O75154 756 aa18.78■□□□□ 0.6
CLN5-218ENST00000637397 PDE4CQ08493 712 aa18.78■□□□□ 0.6
CLN5-218ENST00000637397 ADCY5O95622 1261 aa18.77■□□□□ 0.6
CLN5-218ENST00000637397 LRSAM1Q6UWE0 723 aa18.77■□□□□ 0.6
CLN5-218ENST00000637397 CKAP2LQ8IYA6 745 aa18.77■□□□□ 0.6
CLN5-218ENST00000637397 CEP57L1Q8IYX8 460 aa18.77■□□□□ 0.6
CLN5-218ENST00000637397 ADGRL1O94910 1474 aa18.77■□□□□ 0.6
CLN5-218ENST00000637397 BTBD11A6QL63 1104 aa18.77■□□□□ 0.6
CLN5-218ENST00000637397 FLIIQ13045 1269 aa18.77■□□□□ 0.6
CLN5-218ENST00000637397 FAM177A1Q8N128 213 aaPredicted RBP18.77■□□□□ 0.6
CLN5-218ENST00000637397 ANKRD36BQ8N2N9 1353 aa18.77■□□□□ 0.59
CLN5-218ENST00000637397 MCM5P33992 734 aa18.77■□□□□ 0.59
CLN5-218ENST00000637397 TAF7Q15545 349 aaPredicted RBP18.77■□□□□ 0.59
CLN5-218ENST00000637397 C8orf58Q8NAV2 365 aa18.76■□□□□ 0.59
CLN5-218ENST00000637397 SYTL4Q96C24 671 aaPredicted RBP18.76■□□□□ 0.59
CLN5-218ENST00000637397 HCLS1P14317 486 aaPredicted RBP18.76■□□□□ 0.59
CLN5-218ENST00000637397 BOLA2Q9H3K6 86 aa18.76■□□□□ 0.59
CLN5-218ENST00000637397 PRIM1P49642 420 aaKnown RBP18.76■□□□□ 0.59
CLN5-218ENST00000637397 STX6O43752 255 aa18.75■□□□□ 0.59
CLN5-218ENST00000637397 KRT32Q14532 448 aa18.75■□□□□ 0.59
CLN5-218ENST00000637397 MRPL50Q8N5N7 158 aaKnown RBP18.75■□□□□ 0.59
CLN5-218ENST00000637397 SCAND2PQ9GZW5 306 aaPredicted RBP18.75■□□□□ 0.59
CLN5-218ENST00000637397 TSPYL6Q8N831 410 aa18.75■□□□□ 0.59
CLN5-218ENST00000637397 PDIA4P13667 645 aaKnown RBP18.75■□□□□ 0.59
CLN5-218ENST00000637397 FBXO31Q5XUX0 539 aaPredicted RBP18.75■□□□□ 0.59
CLN5-218ENST00000637397 SH2B1Q9NRF2 756 aaPredicted RBP18.75■□□□□ 0.59
CLN5-218ENST00000637397 ZMYM4Q5VZL5 1548 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms