RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 ALS2Q96Q42 1657 aa21.63■■□□□ 1.05
CHRNA7-227ENST00000637350 ITPRIPQ8IWB1 547 aa21.63■■□□□ 1.05
CHRNA7-227ENST00000637350 TMEM57Q8N5G2 664 aa21.63■■□□□ 1.05
CHRNA7-227ENST00000637350 SLC4A3P48751 1232 aa21.62■■□□□ 1.05
CHRNA7-227ENST00000637350 SEC24BO95487 1268 aa21.61■■□□□ 1.05
CHRNA7-227ENST00000637350 DDX17Q92841 729 aaKnown RBP21.6■■□□□ 1.05
CHRNA7-227ENST00000637350 KIF16BQ96L93 1317 aa21.6■■□□□ 1.05
CHRNA7-227ENST00000637350 TSPYL6Q8N831 410 aa21.6■■□□□ 1.05
CHRNA7-227ENST00000637350 RWDD1Q9H446 243 aaPredicted RBP21.6■■□□□ 1.05
CHRNA7-227ENST00000637350 FAM83GA6ND36 823 aa21.59■■□□□ 1.05
CHRNA7-227ENST00000637350 ARHGEF25Q86VW2 580 aa21.59■■□□□ 1.05
CHRNA7-227ENST00000637350 LTV1Q96GA3 475 aaPredicted RBP21.59■■□□□ 1.05
CHRNA7-227ENST00000637350 ALDH1L2Q3SY69 923 aa21.59■■□□□ 1.05
CHRNA7-227ENST00000637350 DDX19BQ9UMR2 479 aa21.59■■□□□ 1.05
CHRNA7-227ENST00000637350 ZNF853P0CG23 659 aa21.58■■□□□ 1.05
CHRNA7-227ENST00000637350 MBIPQ9NS73 344 aa21.58■■□□□ 1.05
CHRNA7-227ENST00000637350 GNAI1P63096 354 aa21.57■■□□□ 1.04
CHRNA7-227ENST00000637350 IFT57Q9NWB7 429 aa21.57■■□□□ 1.04
CHRNA7-227ENST00000637350 ZBTB7CA1YPR0 619 aa21.57■■□□□ 1.04
CHRNA7-227ENST00000637350 PLEKHG5O94827 1062 aa21.57■■□□□ 1.04
CHRNA7-227ENST00000637350 BRINP3Q76B58 766 aa21.57■■□□□ 1.04
CHRNA7-227ENST00000637350 VAMP4O75379 141 aa21.56■■□□□ 1.04
CHRNA7-227ENST00000637350 SLAIN2Q9P270 581 aa21.56■■□□□ 1.04
CHRNA7-227ENST00000637350 PXDNQ92626 1479 aa21.56■■□□□ 1.04
CHRNA7-227ENST00000637350 DCTN1Q14203 1278 aa21.56■■□□□ 1.04
CHRNA7-227ENST00000637350 TNS3Q68CZ2 1445 aa21.55■■□□□ 1.04
CHRNA7-227ENST00000637350 CFAP44Q96MT7 982 aa21.55■■□□□ 1.04
CHRNA7-227ENST00000637350 ZBTB40Q9NUA8 1239 aa21.55■■□□□ 1.04
CHRNA7-227ENST00000637350 MED1Q15648 1581 aaPredicted RBP21.54■■□□□ 1.04
CHRNA7-227ENST00000637350 MTHFSDQ2M296 383 aaKnown RBP21.54■■□□□ 1.04
CHRNA7-227ENST00000637350 ELL2O00472 640 aaPredicted RBP21.53■■□□□ 1.04
CHRNA7-227ENST00000637350 HDAC1Q13547 482 aaPredicted RBP21.53■■□□□ 1.04
CHRNA7-227ENST00000637350 GAS2L2Q8NHY3 880 aa21.53■■□□□ 1.04
CHRNA7-227ENST00000637350 BRPF1P55201 1214 aaPredicted RBP21.53■■□□□ 1.04
CHRNA7-227ENST00000637350 MRPL50Q8N5N7 158 aaKnown RBP21.53■■□□□ 1.04
CHRNA7-227ENST00000637350 SPATA31A3Q5VYP0 1347 aa21.52■■□□□ 1.04
CHRNA7-227ENST00000637350 IPO8O15397 1037 aaKnown RBP21.52■■□□□ 1.04
CHRNA7-227ENST00000637350 DEKP35659 375 aaKnown RBP21.51■■□□□ 1.03
CHRNA7-227ENST00000637350 C8orf58Q8NAV2 365 aa21.51■■□□□ 1.03
CHRNA7-227ENST00000637350 NBPF6Q5VWK0 638 aa21.51■■□□□ 1.03
CHRNA7-227ENST00000637350 NBPF4Q96M43 638 aa21.51■■□□□ 1.03
CHRNA7-227ENST00000637350 ZNF428Q96B54 188 aa21.5■■□□□ 1.03
CHRNA7-227ENST00000637350 MCM10Q7L590 875 aa21.49■■□□□ 1.03
CHRNA7-227ENST00000637350 USHBP1Q8N6Y0 703 aa21.49■■□□□ 1.03
CHRNA7-227ENST00000637350 RTF1Q92541 710 aaKnown RBP21.49■■□□□ 1.03
CHRNA7-227ENST00000637350 ZC3H6P61129 1189 aaKnown RBP21.49■■□□□ 1.03
CHRNA7-227ENST00000637350 TWISTNBQ3B726 338 aaPredicted RBP21.48■■□□□ 1.03
CHRNA7-227ENST00000637350 RTL5Q5HYW3 569 aaPredicted RBP21.48■■□□□ 1.03
CHRNA7-227ENST00000637350 RGPD2P0DJD1 1756 aa21.48■■□□□ 1.03
CHRNA7-227ENST00000637350 SMC5Q8IY18 1101 aa21.48■■□□□ 1.03
CHRNA7-227ENST00000637350 ANKRD24Q8TF21 1146 aa21.47■■□□□ 1.03
CHRNA7-227ENST00000637350 AXIN2Q9Y2T1 843 aa21.47■■□□□ 1.03
CHRNA7-227ENST00000637350 SOS2Q07890 1332 aaPredicted RBP21.47■■□□□ 1.03
CHRNA7-227ENST00000637350 HTATSF1O43719 755 aaKnown RBP21.47■■□□□ 1.03
CHRNA7-227ENST00000637350 LRRC59Q96AG4 307 aaKnown RBP21.46■■□□□ 1.03
CHRNA7-227ENST00000637350 ABCC4O15439 1325 aa21.46■■□□□ 1.03
CHRNA7-227ENST00000637350 CABLES1Q8TDN4 633 aa21.45■■□□□ 1.03
CHRNA7-227ENST00000637350 CRYBG1Q9Y4K1 1723 aa21.45■■□□□ 1.02
CHRNA7-227ENST00000637350 RGPD5Q99666 1765 aa21.45■■□□□ 1.02
CHRNA7-227ENST00000637350 CHL1O00533 1208 aa21.45■■□□□ 1.02
CHRNA7-227ENST00000637350 GNAT3A8MTJ3 354 aa21.44■■□□□ 1.02
CHRNA7-227ENST00000637350 KRT24Q2M2I5 525 aa21.44■■□□□ 1.02
CHRNA7-227ENST00000637350 C1orf115Q9H7X2 142 aa21.44■■□□□ 1.02
CHRNA7-227ENST00000637350 CRB1P82279 1406 aa21.44■■□□□ 1.02
CHRNA7-227ENST00000637350 NCAPD2Q15021 1401 aa21.44■■□□□ 1.02
CHRNA7-227ENST00000637350 ZBTB7BO15156 539 aaPredicted RBP21.43■■□□□ 1.02
CHRNA7-227ENST00000637350 ARHGAP45Q92619 1136 aa21.43■■□□□ 1.02
CHRNA7-227ENST00000637350 ERBB3P21860 1342 aa21.43■■□□□ 1.02
CHRNA7-227ENST00000637350 DAXXQ9UER7 740 aaPredicted RBP21.42■■□□□ 1.02
CHRNA7-227ENST00000637350 MAP3K5Q99683 1374 aa21.42■■□□□ 1.02
CHRNA7-227ENST00000637350 CAMTA1Q9Y6Y1 1673 aa21.42■■□□□ 1.02
CHRNA7-227ENST00000637350 COL18A1P39060 1754 aa21.4■■□□□ 1.02
CHRNA7-227ENST00000637350 ABCC6O95255 1503 aa21.4■■□□□ 1.02
CHRNA7-227ENST00000637350 RGS12O14924 1447 aa21.4■■□□□ 1.02
CHRNA7-227ENST00000637350 CPDO75976 1380 aa21.4■■□□□ 1.02
CHRNA7-227ENST00000637350 TBC1D32Q96NH3 1257 aa21.4■■□□□ 1.02
CHRNA7-227ENST00000637350 LRRC37A3O60309 1634 aa21.4■■□□□ 1.02
CHRNA7-227ENST00000637350 NHSL1Q5SYE7 1610 aa21.39■■□□□ 1.02
CHRNA7-227ENST00000637350 NUCB1Q02818 461 aa21.39■■□□□ 1.01
CHRNA7-227ENST00000637350 KIAA0232Q92628 1395 aa21.38■■□□□ 1.01
CHRNA7-227ENST00000637350 AMOTQ4VCS5 1084 aa21.37■■□□□ 1.01
CHRNA7-227ENST00000637350 SIRT2Q8IXJ6 389 aa21.37■■□□□ 1.01
CHRNA7-227ENST00000637350 LNPKQ9C0E8 428 aa21.37■■□□□ 1.01
CHRNA7-227ENST00000637350 HAP1P54257 671 aaPredicted RBP21.37■■□□□ 1.01
CHRNA7-227ENST00000637350 PLEKHO1Q53GL0 409 aaPredicted RBP21.37■■□□□ 1.01
CHRNA7-227ENST00000637350 NFKBIBQ15653 356 aa21.36■■□□□ 1.01
CHRNA7-227ENST00000637350 IL17REQ8NFR9 667 aa21.36■■□□□ 1.01
CHRNA7-227ENST00000637350 TSPYL4Q9UJ04 414 aa21.36■■□□□ 1.01
CHRNA7-227ENST00000637350 LMO7Q8WWI1 1683 aa21.36■■□□□ 1.01
CHRNA7-227ENST00000637350 CHRNA2Q15822 529 aa21.35■■□□□ 1.01
CHRNA7-227ENST00000637350 USP35Q9P2H5 1018 aa21.35■■□□□ 1.01
CHRNA7-227ENST00000637350 MIS18AQ9NYP9 233 aa21.35■■□□□ 1.01
CHRNA7-227ENST00000637350 CHD1LQ86WJ1 897 aa21.34■■□□□ 1.01
CHRNA7-227ENST00000637350 LTBP4Q8N2S1 1624 aa21.34■■□□□ 1.01
CHRNA7-227ENST00000637350 FAM208AQ9UK61 1670 aaKnown RBP21.34■■□□□ 1.01
CHRNA7-227ENST00000637350 NLRP2Q9NX02 1062 aa21.33■■□□□ 1.01
CHRNA7-227ENST00000637350 AKAP4Q5JQC9 854 aa21.33■■□□□ 1
CHRNA7-227ENST00000637350 API5Q9BZZ5 524 aaKnown RBP21.33■■□□□ 1
CHRNA7-227ENST00000637350 CEMIPQ8WUJ3 1361 aa21.32■■□□□ 1
CHRNA7-227ENST00000637350 ZNF530Q6P9A1 599 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms