RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 PABPN1LA6NDY0 278 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 RNF187Q5TA31 235 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 GOLGA6L7A0A1B0GV03 622 aa19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 PRPF4BQ13523 1007 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 SH3BP5O60239 455 aa19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 CDC45O75419 566 aa19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 ISM2Q6H9L7 571 aa19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 AKNAD1Q5T1N1 836 aa19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 IPO4Q8TEX9 1081 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 PRKRIP1Q9H875 184 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 TRIM21P19474 475 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-238ENST00000637276 PAIP2Q9BPZ3 127 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-238ENST00000637276 TNMDQ9H2S6 317 aa19.21■□□□□ 0.67
CACNA1A-238ENST00000637276 CPLX3Q8WVH0 158 aa19.21■□□□□ 0.67
CACNA1A-238ENST00000637276 JAKMIP3Q5VZ66 844 aa19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 SIRT1Q96EB6 747 aa19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 LARP1Q6PKG0 1096 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 PPP4R3AQ6IN85 833 aa19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 SAMM50Q9Y512 469 aa19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 FAM170AA1A519 330 aa19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 CWC27Q6UX04 472 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 CDCA7LQ96GN5 454 aa19.19■□□□□ 0.66
CACNA1A-238ENST00000637276 GJC1P36383 396 aa19.19■□□□□ 0.66
CACNA1A-238ENST00000637276 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
CACNA1A-238ENST00000637276 RAB11FIP4Q86YS3 637 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 FILIP1Q7Z7B0 1213 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 FAM212AQ96EL1 285 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 NOB1Q9ULX3 412 aaKnown RBP19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 PPP1R12AO14974 1030 aaPredicted RBP19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 BCAR3O75815 825 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 CEP57L1Q8IYX8 460 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 TAF4BQ92750 862 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 EPB41L2O43491 1005 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 CCDC57Q2TAC2 916 aa19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 MIS18AQ9NYP9 233 aa19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 TSR2Q969E8 191 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 ZBED9Q6R2W3 1325 aa19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 ZNF396Q96N95 335 aaPredicted RBP19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 UQCRHP07919 91 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 IFFO1Q0D2I5 559 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 TIGD1Q96MW7 591 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 UBAC1Q9BSL1 405 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 EIF3JO75822 258 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 PPARDQ03181 441 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 PSMC4P43686 418 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 TRIM22Q8IYM9 498 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 SSX2IPQ9Y2D8 614 aa19.15■□□□□ 0.66
CACNA1A-238ENST00000637276 PROSER2Q86WR7 435 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-238ENST00000637276 CCDC160A6NGH7 325 aa19.15■□□□□ 0.66
CACNA1A-238ENST00000637276 POLR3GO15318 223 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-238ENST00000637276 FAM107BQ9H098 131 aa19.15■□□□□ 0.66
CACNA1A-238ENST00000637276 WASHC2AQ641Q2 1341 aa19.14■□□□□ 0.66
CACNA1A-238ENST00000637276 ZNF622Q969S3 477 aaKnown RBP eCLIP19.14■□□□□ 0.66
CACNA1A-238ENST00000637276 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-238ENST00000637276 POTEJP0CG39 1038 aa19.14■□□□□ 0.65
CACNA1A-238ENST00000637276 GNAI1P63096 354 aa19.14■□□□□ 0.65
CACNA1A-238ENST00000637276 AACSQ86V21 672 aa19.14■□□□□ 0.65
CACNA1A-238ENST00000637276 TMEM110-MUSTN1A8MSY1 372 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 PLS1Q14651 629 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 MKNK2Q9HBH9 465 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 UQCRHLA0A096LP55 91 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 SLC26A8Q96RN1 970 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 BMP2KQ9NSY1 1161 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 TMOD2Q9NZR1 351 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 PDZRN3Q9UPQ7 1066 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 F8W031 263 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 BIN2Q9UBW5 565 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 SEC63Q9UGP8 760 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 FLIIQ13045 1269 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 FAM69CQ0P6D2 419 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 C16orf71Q8IYS4 520 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 BMS1Q14692 1282 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 BICD1Q96G01 975 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 JPH4Q96JJ6 628 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 RFX1P22670 979 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 IL1RAPL2Q9NP60 686 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 MRE11P49959 708 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 CFAP58Q5T655 872 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 RBM26Q5T8P6 1007 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 NACAP1Q9BZK3 213 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 MTHFSP49914 203 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 TMCO3Q6UWJ1 677 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 CACNA2D4Q7Z3S7 1137 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 CCDC150Q8NCX0 1101 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 ADAMTS8Q9UP79 889 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 ZC3H6P61129 1189 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 TNIP1Q15025 636 aa19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 CCDC88BA6NC98 1476 aa19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 NUTM1Q86Y26 1132 aa19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 TTC36A6NLP5 189 aa19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 NOP9Q86U38 636 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 CKAP2LQ8IYA6 745 aa19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 EXOSC9Q06265 439 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 RABEP1Q15276 862 aa19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 CCDC30Q5VVM6 783 aa19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 HOOK3Q86VS8 718 aa19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 RANBP6O60518 1105 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 PPM1EQ8WY54 764 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms