RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 PABPN1LA6NDY0 278 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 RNF187Q5TA31 235 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 GOLGA6L7A0A1B0GV03 622 aa19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 PRPF4BQ13523 1007 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 SH3BP5O60239 455 aa19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 CDC45O75419 566 aa19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 ISM2Q6H9L7 571 aa19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 AKNAD1Q5T1N1 836 aa19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 IPO4Q8TEX9 1081 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 PRKRIP1Q9H875 184 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-238ENST00000637276 TRIM21P19474 475 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-238ENST00000637276 PAIP2Q9BPZ3 127 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-238ENST00000637276 TNMDQ9H2S6 317 aa19.21■□□□□ 0.67
CACNA1A-238ENST00000637276 CPLX3Q8WVH0 158 aa19.21■□□□□ 0.67
CACNA1A-238ENST00000637276 JAKMIP3Q5VZ66 844 aa19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 SIRT1Q96EB6 747 aa19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 LARP1Q6PKG0 1096 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 PPP4R3AQ6IN85 833 aa19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 SAMM50Q9Y512 469 aa19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 FAM170AA1A519 330 aa19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 CWC27Q6UX04 472 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-238ENST00000637276 CDCA7LQ96GN5 454 aa19.19■□□□□ 0.66
CACNA1A-238ENST00000637276 GJC1P36383 396 aa19.19■□□□□ 0.66
CACNA1A-238ENST00000637276 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
CACNA1A-238ENST00000637276 RAB11FIP4Q86YS3 637 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 FILIP1Q7Z7B0 1213 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 FAM212AQ96EL1 285 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 NOB1Q9ULX3 412 aaKnown RBP19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 PPP1R12AO14974 1030 aaPredicted RBP19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 BCAR3O75815 825 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 CEP57L1Q8IYX8 460 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 TAF4BQ92750 862 aa19.18■□□□□ 0.66
CACNA1A-238ENST00000637276 EPB41L2O43491 1005 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 CCDC57Q2TAC2 916 aa19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 MIS18AQ9NYP9 233 aa19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 TSR2Q969E8 191 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 ZBED9Q6R2W3 1325 aa19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 ZNF396Q96N95 335 aaPredicted RBP19.17■□□□□ 0.66
CACNA1A-238ENST00000637276 UQCRHP07919 91 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 IFFO1Q0D2I5 559 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 TIGD1Q96MW7 591 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 UBAC1Q9BSL1 405 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 EIF3JO75822 258 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 PPARDQ03181 441 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 PSMC4P43686 418 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 TRIM22Q8IYM9 498 aa19.16■□□□□ 0.66
CACNA1A-238ENST00000637276 SSX2IPQ9Y2D8 614 aa19.15■□□□□ 0.66
CACNA1A-238ENST00000637276 PROSER2Q86WR7 435 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-238ENST00000637276 CCDC160A6NGH7 325 aa19.15■□□□□ 0.66
CACNA1A-238ENST00000637276 POLR3GO15318 223 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-238ENST00000637276 FAM107BQ9H098 131 aa19.15■□□□□ 0.66
CACNA1A-238ENST00000637276 WASHC2AQ641Q2 1341 aa19.14■□□□□ 0.66
CACNA1A-238ENST00000637276 ZNF622Q969S3 477 aaKnown RBP eCLIP19.14■□□□□ 0.66
CACNA1A-238ENST00000637276 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-238ENST00000637276 POTEJP0CG39 1038 aa19.14■□□□□ 0.65
CACNA1A-238ENST00000637276 GNAI1P63096 354 aa19.14■□□□□ 0.65
CACNA1A-238ENST00000637276 AACSQ86V21 672 aa19.14■□□□□ 0.65
CACNA1A-238ENST00000637276 TMEM110-MUSTN1A8MSY1 372 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 PLS1Q14651 629 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 MKNK2Q9HBH9 465 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 UQCRHLA0A096LP55 91 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 SLC26A8Q96RN1 970 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 BMP2KQ9NSY1 1161 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 TMOD2Q9NZR1 351 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 PDZRN3Q9UPQ7 1066 aa19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 F8W031 263 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 BIN2Q9UBW5 565 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 SEC63Q9UGP8 760 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-238ENST00000637276 FLIIQ13045 1269 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 FAM69CQ0P6D2 419 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 C16orf71Q8IYS4 520 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 BMS1Q14692 1282 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 BICD1Q96G01 975 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 JPH4Q96JJ6 628 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 RFX1P22670 979 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 IL1RAPL2Q9NP60 686 aa19.12■□□□□ 0.65
CACNA1A-238ENST00000637276 MRE11P49959 708 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 CFAP58Q5T655 872 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 RBM26Q5T8P6 1007 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 NACAP1Q9BZK3 213 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 MTHFSP49914 203 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 TMCO3Q6UWJ1 677 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 CACNA2D4Q7Z3S7 1137 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 CCDC150Q8NCX0 1101 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 ADAMTS8Q9UP79 889 aa19.11■□□□□ 0.65
CACNA1A-238ENST00000637276 ZC3H6P61129 1189 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 TNIP1Q15025 636 aa19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 CCDC88BA6NC98 1476 aa19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 NUTM1Q86Y26 1132 aa19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 TTC36A6NLP5 189 aa19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 NOP9Q86U38 636 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 CKAP2LQ8IYA6 745 aa19.1■□□□□ 0.65
CACNA1A-238ENST00000637276 EXOSC9Q06265 439 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 RABEP1Q15276 862 aa19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 CCDC30Q5VVM6 783 aa19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 HOOK3Q86VS8 718 aa19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 RANBP6O60518 1105 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 PPM1EQ8WY54 764 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms