RNA–Protein interactions for RNA: ENST00000637052.1

SYNGAP1-219, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-219ENST00000637052 USP54Q70EL1 1684 aa10.34□□□□□ -0.75
SYNGAP1-219ENST00000637052 LY75O60449 1722 aa10.33□□□□□ -0.76
SYNGAP1-219ENST00000637052 MSH5O43196 834 aa10.33□□□□□ -0.76
SYNGAP1-219ENST00000637052 NEUROD1Q13562 356 aa10.33□□□□□ -0.76
SYNGAP1-219ENST00000637052 IP6K1Q92551 441 aa10.33□□□□□ -0.76
SYNGAP1-219ENST00000637052 ROCK2O75116 1388 aaKnown RBP10.33□□□□□ -0.76
SYNGAP1-219ENST00000637052 DOT1LQ8TEK3 1739 aa10.33□□□□□ -0.76
SYNGAP1-219ENST00000637052 CCNL1Q9UK58 526 aaPredicted RBP10.32□□□□□ -0.76
SYNGAP1-219ENST00000637052 ATP10DQ9P241 1426 aa10.32□□□□□ -0.76
SYNGAP1-219ENST00000637052 ANKRD36BQ8N2N9 1353 aa10.31□□□□□ -0.76
SYNGAP1-219ENST00000637052 GRIN3BO60391 1043 aa10.31□□□□□ -0.76
SYNGAP1-219ENST00000637052 SMIM5Q71RC9 77 aa10.31□□□□□ -0.76
SYNGAP1-219ENST00000637052 ZNF526Q8TF50 670 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-219ENST00000637052 HDGFL2Q7Z4V5 671 aaPredicted RBP10.3□□□□□ -0.76
SYNGAP1-219ENST00000637052 ZCRB1Q8TBF4 217 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-219ENST00000637052 WWC3Q9ULE0 1092 aa10.3□□□□□ -0.76
SYNGAP1-219ENST00000637052 FAM208AQ9UK61 1670 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-219ENST00000637052 HOXC9P31274 260 aa10.29□□□□□ -0.76
SYNGAP1-219ENST00000637052 AMIGO3Q86WK7 504 aa10.29□□□□□ -0.76
SYNGAP1-219ENST00000637052 USHBP1Q8N6Y0 703 aa10.29□□□□□ -0.76
SYNGAP1-219ENST00000637052 MAP3K19Q56UN5 1328 aa10.29□□□□□ -0.76
SYNGAP1-219ENST00000637052 MEGF6O75095 1541 aa10.28□□□□□ -0.76
SYNGAP1-219ENST00000637052 A0A1W2PP64 1363 aa10.28□□□□□ -0.76
SYNGAP1-219ENST00000637052 EDC4Q6P2E9 1401 aaKnown RBP10.28□□□□□ -0.76
SYNGAP1-219ENST00000637052 NBPF6Q5VWK0 638 aa10.28□□□□□ -0.76
SYNGAP1-219ENST00000637052 NBPF4Q96M43 638 aa10.28□□□□□ -0.76
SYNGAP1-219ENST00000637052 GPBP1L1Q9HC44 474 aaPredicted RBP10.27□□□□□ -0.77
SYNGAP1-219ENST00000637052 TAF1LQ8IZX4 1826 aa10.26□□□□□ -0.77
SYNGAP1-219ENST00000637052 HSPA6P17066 643 aa10.26□□□□□ -0.77
SYNGAP1-219ENST00000637052 AMPHP49418 695 aa10.26□□□□□ -0.77
SYNGAP1-219ENST00000637052 CARD11Q9BXL7 1154 aa10.26□□□□□ -0.77
SYNGAP1-219ENST00000637052 CD2APQ9Y5K6 639 aa10.26□□□□□ -0.77
SYNGAP1-219ENST00000637052 ADCY9O60503 1353 aa10.26□□□□□ -0.77
SYNGAP1-219ENST00000637052 USP47Q96K76 1375 aa10.26□□□□□ -0.77
SYNGAP1-219ENST00000637052 C5P01031 1676 aa10.25□□□□□ -0.77
SYNGAP1-219ENST00000637052 RRS1Q15050 365 aaKnown RBP10.25□□□□□ -0.77
SYNGAP1-219ENST00000637052 TERF2IPQ9NYB0 399 aa10.25□□□□□ -0.77
SYNGAP1-219ENST00000637052 KIF3CO14782 793 aa10.24□□□□□ -0.77
SYNGAP1-219ENST00000637052 MPRIPQ6WCQ1 1025 aa10.24□□□□□ -0.77
SYNGAP1-219ENST00000637052 COG3Q96JB2 828 aa10.24□□□□□ -0.77
SYNGAP1-219ENST00000637052 PHF14O94880 888 aa10.23□□□□□ -0.77
SYNGAP1-219ENST00000637052 TOGARAM1Q9Y4F4 1720 aa10.23□□□□□ -0.77
SYNGAP1-219ENST00000637052 IGSF1Q8N6C5 1336 aa10.23□□□□□ -0.77
SYNGAP1-219ENST00000637052 ITGB4P16144 1822 aa10.23□□□□□ -0.77
SYNGAP1-219ENST00000637052 CYP27B1O15528 508 aa10.22□□□□□ -0.77
SYNGAP1-219ENST00000637052 PALLDQ8WX93 1383 aa10.22□□□□□ -0.77
SYNGAP1-219ENST00000637052 C4BP0C0L5 1744 aa10.21□□□□□ -0.77
SYNGAP1-219ENST00000637052 UBR3Q6ZT12 1888 aa10.21□□□□□ -0.77
SYNGAP1-219ENST00000637052 TATP17735 454 aaPredicted RBP10.21□□□□□ -0.77
SYNGAP1-219ENST00000637052 HSP90AB2PQ58FF8 381 aa10.21□□□□□ -0.77
SYNGAP1-219ENST00000637052 TESK2Q96S53 571 aa10.21□□□□□ -0.77
SYNGAP1-219ENST00000637052 GGNBP2Q9H3C7 697 aa10.21□□□□□ -0.77
SYNGAP1-219ENST00000637052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.2□□□□□ -0.78
SYNGAP1-219ENST00000637052 FYB1O15117 783 aa10.2□□□□□ -0.78
SYNGAP1-219ENST00000637052 LINC00116Q8NCU8 138 aa10.2□□□□□ -0.78
SYNGAP1-219ENST00000637052 FLAD1Q8NFF5 587 aa10.2□□□□□ -0.78
SYNGAP1-219ENST00000637052 RAPGEF4Q8WZA2 1011 aa10.2□□□□□ -0.78
SYNGAP1-219ENST00000637052 PIGBQ92521 554 aa10.2□□□□□ -0.78
SYNGAP1-219ENST00000637052 AK7Q96M32 723 aa10.2□□□□□ -0.78
SYNGAP1-219ENST00000637052 PUS7Q96PZ0 661 aaKnown RBP10.2□□□□□ -0.78
SYNGAP1-219ENST00000637052 ST20-MTHFSA0A0A6YYL1 179 aa10.19□□□□□ -0.78
SYNGAP1-219ENST00000637052 DNAJC5GQ8N7S2 189 aa10.19□□□□□ -0.78
SYNGAP1-219ENST00000637052 MAP2P11137 1827 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-219ENST00000637052 CGNL1Q0VF96 1302 aa10.18□□□□□ -0.78
SYNGAP1-219ENST00000637052 N4BP2Q86UW6 1770 aaPredicted RBP10.18□□□□□ -0.78
SYNGAP1-219ENST00000637052 RTL1A6NKG5 1358 aa10.17□□□□□ -0.78
SYNGAP1-219ENST00000637052 PCDH11XQ9BZA7 1347 aa10.17□□□□□ -0.78
SYNGAP1-219ENST00000637052 PCDH11YQ9BZA8 1340 aa10.17□□□□□ -0.78
SYNGAP1-219ENST00000637052 HTRA3P83110 453 aa10.17□□□□□ -0.78
SYNGAP1-219ENST00000637052 ITPK1Q13572 414 aa10.17□□□□□ -0.78
SYNGAP1-219ENST00000637052 KIAA1551Q9HCM1 1747 aa10.16□□□□□ -0.78
SYNGAP1-219ENST00000637052 LOC102724428A0A0B4J2F2 783 aa10.16□□□□□ -0.78
SYNGAP1-219ENST00000637052 A0A0G2JLW4 131 aa10.16□□□□□ -0.78
SYNGAP1-219ENST00000637052 SIK1P57059 783 aa10.16□□□□□ -0.78
SYNGAP1-219ENST00000637052 SMARCC1Q92922 1105 aaPredicted RBP10.16□□□□□ -0.78
SYNGAP1-219ENST00000637052 NMRK2Q9NPI5 230 aa10.16□□□□□ -0.78
SYNGAP1-219ENST00000637052 ASAP1Q9ULH1 1129 aa10.16□□□□□ -0.78
SYNGAP1-219ENST00000637052 INSRP06213 1382 aa10.15□□□□□ -0.78
SYNGAP1-219ENST00000637052 GNPATO15228 680 aa10.15□□□□□ -0.78
SYNGAP1-219ENST00000637052 MMP10P09238 476 aa10.15□□□□□ -0.78
SYNGAP1-219ENST00000637052 SSFA2P28290 1259 aa10.15□□□□□ -0.78
SYNGAP1-219ENST00000637052 APLP1P51693 650 aa10.15□□□□□ -0.78
SYNGAP1-219ENST00000637052 NKX1-1Q15270 411 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-219ENST00000637052 EMILIN1Q9Y6C2 1016 aa10.15□□□□□ -0.78
SYNGAP1-219ENST00000637052 ARHGAP27Q6ZUM4 889 aa10.14□□□□□ -0.79
SYNGAP1-219ENST00000637052 BCS1LQ9Y276 419 aa10.14□□□□□ -0.79
SYNGAP1-219ENST00000637052 PXDNLA1KZ92 1463 aa10.14□□□□□ -0.79
SYNGAP1-219ENST00000637052 SMG6Q86US8 1419 aaKnown RBP10.14□□□□□ -0.79
SYNGAP1-219ENST00000637052 CICQ96RK0 1608 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-219ENST00000637052 KIF13BQ9NQT8 1826 aa10.14□□□□□ -0.79
SYNGAP1-219ENST00000637052 PKD1L3Q7Z443 1732 aa10.13□□□□□ -0.79
SYNGAP1-219ENST00000637052 TOMM70O94826 608 aa10.13□□□□□ -0.79
SYNGAP1-219ENST00000637052 DPEP1P16444 411 aa10.13□□□□□ -0.79
SYNGAP1-219ENST00000637052 ATP6V1AP38606 617 aa10.13□□□□□ -0.79
SYNGAP1-219ENST00000637052 SLC4A9Q96Q91 983 aa10.13□□□□□ -0.79
SYNGAP1-219ENST00000637052 CARD14Q9BXL6 1004 aa10.13□□□□□ -0.79
SYNGAP1-219ENST00000637052 ATG3Q9NT62 314 aa10.13□□□□□ -0.79
SYNGAP1-219ENST00000637052 FLT4P35916 1363 aa10.13□□□□□ -0.79
SYNGAP1-219ENST00000637052 KCNA3P22001 575 aa10.12□□□□□ -0.79
SYNGAP1-219ENST00000637052 COL13A1Q5TAT6 717 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms