RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
CACNA1A-235ENST00000637004 DCTPP1Q9H773 170 aa19.05■□□□□ 0.64
CACNA1A-235ENST00000637004 SYCE3A1L190 88 aa19.04■□□□□ 0.64
CACNA1A-235ENST00000637004 FYB1O15117 783 aa19.04■□□□□ 0.64
CACNA1A-235ENST00000637004 SLC52A1Q9NWF4 448 aa19.04■□□□□ 0.64
CACNA1A-235ENST00000637004 TMEM63CQ9P1W3 806 aa19.04■□□□□ 0.64
CACNA1A-235ENST00000637004 KIF24Q5T7B8 1368 aa19.03■□□□□ 0.64
CACNA1A-235ENST00000637004 GNAI1P63096 354 aa19.03■□□□□ 0.64
CACNA1A-235ENST00000637004 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
CACNA1A-235ENST00000637004 PREX1Q8TCU6 1659 aa19.03■□□□□ 0.64
CACNA1A-235ENST00000637004 REC8O95072 547 aa19.03■□□□□ 0.64
CACNA1A-235ENST00000637004 ZGPATQ8N5A5 531 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-235ENST00000637004 BCL11BQ9C0K0 894 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-235ENST00000637004 AK9Q5TCS8 1911 aa19.03■□□□□ 0.64
CACNA1A-235ENST00000637004 SRPK2P78362 688 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-235ENST00000637004 ZDHHC9Q9Y397 364 aa19.02■□□□□ 0.64
CACNA1A-235ENST00000637004 LTKP29376 864 aa19.02■□□□□ 0.64
CACNA1A-235ENST00000637004 VGFO15240 615 aaPredicted RBP19.01■□□□□ 0.63
CACNA1A-235ENST00000637004 PRKAR2BP31323 418 aa19.01■□□□□ 0.63
CACNA1A-235ENST00000637004 IFT57Q9NWB7 429 aa19.01■□□□□ 0.63
CACNA1A-235ENST00000637004 ATAD2Q6PL18 1390 aa19.01■□□□□ 0.63
CACNA1A-235ENST00000637004 PTMAP06454 111 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-235ENST00000637004 KIAA2012Q0VF49 1180 aa19.01■□□□□ 0.63
CACNA1A-235ENST00000637004 ZFYVE9O95405 1425 aa19.01■□□□□ 0.63
CACNA1A-235ENST00000637004 NFE2L2Q16236 605 aa19.01■□□□□ 0.63
CACNA1A-235ENST00000637004 SYAP1Q96A49 352 aaPredicted RBP19■□□□□ 0.63
CACNA1A-235ENST00000637004 TXNDC2Q86VQ3 553 aa19■□□□□ 0.63
CACNA1A-235ENST00000637004 TSPYL6Q8N831 410 aa19■□□□□ 0.63
CACNA1A-235ENST00000637004 FAM135BQ49AJ0 1406 aa19■□□□□ 0.63
CACNA1A-235ENST00000637004 ARHGEF28Q8N1W1 1705 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-235ENST00000637004 SPATA31D1Q6ZQQ2 1576 aa18.99■□□□□ 0.63
CACNA1A-235ENST00000637004 THEMISQ8N1K5 641 aaPredicted RBP18.99■□□□□ 0.63
CACNA1A-235ENST00000637004 CDC42BPGQ6DT37 1551 aa18.98■□□□□ 0.63
CACNA1A-235ENST00000637004 TSPY26PQ9H489 355 aa18.98■□□□□ 0.63
CACNA1A-235ENST00000637004 LRRC7Q96NW7 1537 aa18.98■□□□□ 0.63
CACNA1A-235ENST00000637004 TWISTNBQ3B726 338 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-235ENST00000637004 CCDC94Q9BW85 323 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-235ENST00000637004 SDSP20132 328 aa18.97■□□□□ 0.63
CACNA1A-235ENST00000637004 SLC26A8Q96RN1 970 aa18.97■□□□□ 0.63
CACNA1A-235ENST00000637004 SETD1BQ9UPS6 1966 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-235ENST00000637004 MCM2P49736 904 aa18.97■□□□□ 0.63
CACNA1A-235ENST00000637004 SAFB2Q14151 953 aaKnown RBP eCLIP18.97■□□□□ 0.63
CACNA1A-235ENST00000637004 RNF214Q8ND24 703 aa18.97■□□□□ 0.63
CACNA1A-235ENST00000637004 PHF14O94880 888 aa18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 MYRIPQ8NFW9 859 aa18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 ANKRD26Q9UPS8 1709 aa18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 ELL2O00472 640 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 ZNF853P0CG23 659 aa18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 HDGFL2Q7Z4V5 671 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 RPAP2Q8IXW5 612 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 ANKRD44Q8N8A2 993 aa18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 PRIMPOLQ96LW4 560 aa18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 MBIPQ9NS73 344 aa18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 LMTK3Q96Q04 1460 aa18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 ERC2O15083 957 aa18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 HMGN5P82970 282 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 NSFL1CQ9UNZ2 370 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-235ENST00000637004 C16orf71Q8IYS4 520 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-235ENST00000637004 PIK3C2BO00750 1634 aa18.95■□□□□ 0.62
CACNA1A-235ENST00000637004 DNTTIP2Q5QJE6 756 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-235ENST00000637004 THUMPD2Q9BTF0 503 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-235ENST00000637004 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.94■□□□□ 0.62
CACNA1A-235ENST00000637004 LMOD3Q0VAK6 560 aa18.94■□□□□ 0.62
CACNA1A-235ENST00000637004 BRD1O95696 1058 aa18.93■□□□□ 0.62
CACNA1A-235ENST00000637004 FAM184AQ8NB25 1140 aa18.93■□□□□ 0.62
CACNA1A-235ENST00000637004 UTP14CQ5TAP6 766 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-235ENST00000637004 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
CACNA1A-235ENST00000637004 A2ML1A8K2U0 1454 aa18.92■□□□□ 0.62
CACNA1A-235ENST00000637004 UVSSAQ2YD98 709 aa18.92■□□□□ 0.62
CACNA1A-235ENST00000637004 TMX3Q96JJ7 454 aa18.92■□□□□ 0.62
CACNA1A-235ENST00000637004 ARID3AQ99856 593 aa18.92■□□□□ 0.62
CACNA1A-235ENST00000637004 CEP170BQ9Y4F5 1589 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-235ENST00000637004 ANKLE2Q86XL3 938 aa18.92■□□□□ 0.62
CACNA1A-235ENST00000637004 NEK4P51957 841 aa18.91■□□□□ 0.62
CACNA1A-235ENST00000637004 OTUD7AQ8TE49 926 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-235ENST00000637004 FOXD4L5Q5VV16 416 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-235ENST00000637004 FOXD4L4Q8WXT5 416 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-235ENST00000637004 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-235ENST00000637004 EID1Q9Y6B2 187 aa18.91■□□□□ 0.62
CACNA1A-235ENST00000637004 CD163L1Q9NR16 1453 aa18.91■□□□□ 0.62
CACNA1A-235ENST00000637004 C8orf58Q8NAV2 365 aa18.9■□□□□ 0.62
CACNA1A-235ENST00000637004 PIBF1Q8WXW3 757 aa18.9■□□□□ 0.62
CACNA1A-235ENST00000637004 INTS4Q96HW7 963 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-235ENST00000637004 CHAMP1Q96JM3 812 aa18.9■□□□□ 0.62
CACNA1A-235ENST00000637004 TMEM2Q9UHN6 1383 aa18.9■□□□□ 0.62
CACNA1A-235ENST00000637004 HAP1P54257 671 aaPredicted RBP18.9■□□□□ 0.62
CACNA1A-235ENST00000637004 CUL4AQ13619 759 aa18.89■□□□□ 0.61
CACNA1A-235ENST00000637004 ATP10DQ9P241 1426 aa18.89■□□□□ 0.61
CACNA1A-235ENST00000637004 HMOX1P09601 288 aa18.89■□□□□ 0.61
CACNA1A-235ENST00000637004 GTF2F1P35269 517 aaKnown RBP eCLIP18.89■□□□□ 0.61
CACNA1A-235ENST00000637004 CEP85Q6P2H3 762 aa18.89■□□□□ 0.61
CACNA1A-235ENST00000637004 STK26Q9P289 416 aa18.89■□□□□ 0.61
CACNA1A-235ENST00000637004 POLKQ9UBT6 870 aa18.89■□□□□ 0.61
CACNA1A-235ENST00000637004 MYO5BQ9ULV0 1848 aa18.89■□□□□ 0.61
CACNA1A-235ENST00000637004 DMTNQ08495 405 aa18.88■□□□□ 0.61
CACNA1A-235ENST00000637004 KNDC1Q76NI1 1749 aa18.88■□□□□ 0.61
CACNA1A-235ENST00000637004 MCCP23508 829 aa18.87■□□□□ 0.61
CACNA1A-235ENST00000637004 RIMS2Q9UQ26 1411 aa18.87■□□□□ 0.61
CACNA1A-235ENST00000637004 NOLC1Q14978 699 aaKnown RBP eCLIP18.87■□□□□ 0.61
CACNA1A-235ENST00000637004 NEXMIFQ5QGS0 1516 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms