RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 ATP10DQ9P241 1426 aa9.47□□□□□ -0.89
SCN8A-212ENST00000636945 TMEM51Q9NW97 253 aa9.47□□□□□ -0.89
SCN8A-212ENST00000636945 LRRC7Q96NW7 1537 aa9.46□□□□□ -0.89
SCN8A-212ENST00000636945 HECW2Q9P2P5 1572 aa9.46□□□□□ -0.89
SCN8A-212ENST00000636945 SYCP1Q15431 976 aa9.46□□□□□ -0.89
SCN8A-212ENST00000636945 FAM135BQ49AJ0 1406 aa9.46□□□□□ -0.89
SCN8A-212ENST00000636945 RTL1A6NKG5 1358 aa9.46□□□□□ -0.9
SCN8A-212ENST00000636945 FEZ1Q99689 392 aa9.46□□□□□ -0.9
SCN8A-212ENST00000636945 CLTCQ00610 1675 aaKnown RBP9.46□□□□□ -0.9
SCN8A-212ENST00000636945 ST18O60284 1047 aa9.45□□□□□ -0.9
SCN8A-212ENST00000636945 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
SCN8A-212ENST00000636945 C14orf93Q9H972 538 aaKnown RBP9.45□□□□□ -0.9
SCN8A-212ENST00000636945 VAMP4O75379 141 aa9.45□□□□□ -0.9
SCN8A-212ENST00000636945 TNNT2P45379 298 aaPredicted RBP9.45□□□□□ -0.9
SCN8A-212ENST00000636945 CBX1P83916 185 aa9.45□□□□□ -0.9
SCN8A-212ENST00000636945 TSC1Q92574 1164 aa9.45□□□□□ -0.9
SCN8A-212ENST00000636945 INTS4Q96HW7 963 aaKnown RBP9.45□□□□□ -0.9
SCN8A-212ENST00000636945 KIAA1524Q8TCG1 905 aa9.45□□□□□ -0.9
SCN8A-212ENST00000636945 ESF1Q9H501 851 aaKnown RBP9.45□□□□□ -0.9
SCN8A-212ENST00000636945 CHAMP1Q96JM3 812 aa9.44□□□□□ -0.9
SCN8A-212ENST00000636945 FUCA2Q9BTY2 467 aa9.44□□□□□ -0.9
SCN8A-212ENST00000636945 ATP7AQ04656 1500 aa9.44□□□□□ -0.9
SCN8A-212ENST00000636945 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
SCN8A-212ENST00000636945 ZNF853P0CG23 659 aa9.44□□□□□ -0.9
SCN8A-212ENST00000636945 RPAP1Q9BWH6 1393 aaPredicted RBP9.44□□□□□ -0.9
SCN8A-212ENST00000636945 PIK3C2BO00750 1634 aa9.43□□□□□ -0.9
SCN8A-212ENST00000636945 MCM2P49736 904 aa9.43□□□□□ -0.9
SCN8A-212ENST00000636945 SYAP1Q96A49 352 aaPredicted RBP9.43□□□□□ -0.9
SCN8A-212ENST00000636945 DIP2CQ9Y2E4 1556 aa9.43□□□□□ -0.9
SCN8A-212ENST00000636945 RGS12O14924 1447 aa9.43□□□□□ -0.9
SCN8A-212ENST00000636945 PHF14O94880 888 aa9.43□□□□□ -0.9
SCN8A-212ENST00000636945 PLPPR3Q6T4P5 718 aa9.43□□□□□ -0.9
SCN8A-212ENST00000636945 PDCL2Q8N4E4 241 aa9.43□□□□□ -0.9
SCN8A-212ENST00000636945 RNF214Q8ND24 703 aa9.43□□□□□ -0.9
SCN8A-212ENST00000636945 OSBPL3Q9H4L5 887 aa9.43□□□□□ -0.9
SCN8A-212ENST00000636945 SDSP20132 328 aa9.42□□□□□ -0.9
SCN8A-212ENST00000636945 GABPB1Q06547 395 aaPredicted RBP9.42□□□□□ -0.9
SCN8A-212ENST00000636945 FAM53CQ9NYF3 392 aa9.42□□□□□ -0.9
SCN8A-212ENST00000636945 TMX3Q96JJ7 454 aa9.42□□□□□ -0.9
SCN8A-212ENST00000636945 KCNF1Q9H3M0 494 aa9.42□□□□□ -0.9
SCN8A-212ENST00000636945 OGFRQ9NZT2 677 aa9.42□□□□□ -0.9
SCN8A-212ENST00000636945 KIDINS220Q9ULH0 1771 aa9.42□□□□□ -0.9
SCN8A-212ENST00000636945 ZFYVE9O95405 1425 aa9.42□□□□□ -0.9
SCN8A-212ENST00000636945 BBXQ8WY36 941 aaPredicted RBP9.42□□□□□ -0.9
SCN8A-212ENST00000636945 ARID3AQ99856 593 aa9.42□□□□□ -0.9
SCN8A-212ENST00000636945 SLC20A2Q08357 652 aa9.41□□□□□ -0.9
SCN8A-212ENST00000636945 C1orf115Q9H7X2 142 aa9.41□□□□□ -0.9
SCN8A-212ENST00000636945 CAMSAP1Q5T5Y3 1602 aa9.41□□□□□ -0.9
SCN8A-212ENST00000636945 A0A1W2PP64 1363 aa9.41□□□□□ -0.9
SCN8A-212ENST00000636945 KDM4AO75164 1064 aa9.41□□□□□ -0.9
SCN8A-212ENST00000636945 ADCY5O95622 1261 aa9.41□□□□□ -0.9
SCN8A-212ENST00000636945 GGT6Q6P531 493 aa9.41□□□□□ -0.9
SCN8A-212ENST00000636945 TTC12Q9H892 705 aaPredicted RBP9.41□□□□□ -0.9
SCN8A-212ENST00000636945 DIAPH3Q9NSV4 1193 aa9.41□□□□□ -0.9
SCN8A-212ENST00000636945 ATAD2Q6PL18 1390 aa9.41□□□□□ -0.9
SCN8A-212ENST00000636945 RIOK3O14730 519 aaKnown RBP9.4□□□□□ -0.9
SCN8A-212ENST00000636945 REC8O95072 547 aa9.4□□□□□ -0.9
SCN8A-212ENST00000636945 ANKRD44Q8N8A2 993 aa9.4□□□□□ -0.9
SCN8A-212ENST00000636945 CTNNA3Q9UI47 895 aa9.4□□□□□ -0.9
SCN8A-212ENST00000636945 KIF20BQ96Q89 1820 aa9.4□□□□□ -0.9
SCN8A-212ENST00000636945 AGLP35573 1532 aa9.4□□□□□ -0.9
SCN8A-212ENST00000636945 FCHSD2O94868 740 aa9.4□□□□□ -0.9
SCN8A-212ENST00000636945 PTMAP06454 111 aaKnown RBP9.4□□□□□ -0.9
SCN8A-212ENST00000636945 ZNF830Q96NB3 372 aaPredicted RBP9.4□□□□□ -0.9
SCN8A-212ENST00000636945 KIF3BO15066 747 aa9.4□□□□□ -0.91
SCN8A-212ENST00000636945 TPM3P06753 285 aa9.4□□□□□ -0.91
SCN8A-212ENST00000636945 SLFN14P0C7P3 912 aa9.4□□□□□ -0.91
SCN8A-212ENST00000636945 CPSF1Q10570 1443 aaKnown RBP9.4□□□□□ -0.91
SCN8A-212ENST00000636945 SSH2Q76I76 1423 aa9.4□□□□□ -0.91
SCN8A-212ENST00000636945 USP25Q9UHP3 1055 aa9.4□□□□□ -0.91
SCN8A-212ENST00000636945 AP5Z1O43299 807 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 GADD45BO75293 160 aaPredicted RBP9.39□□□□□ -0.91
SCN8A-212ENST00000636945 ANAPC15P60006 121 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 CCDC183Q5T5S1 534 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 MORC2Q9Y6X9 1032 aaPredicted RBP9.39□□□□□ -0.91
SCN8A-212ENST00000636945 PTPRMP28827 1452 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 ADAMTSL3P82987 1691 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 SALL3Q9BXA9 1300 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 ERC2O15083 957 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 U2AF2P26368 475 aaKnown RBP eCLIP9.39□□□□□ -0.91
SCN8A-212ENST00000636945 NCBP1Q09161 790 aaKnown RBP9.39□□□□□ -0.91
SCN8A-212ENST00000636945 C16orf71Q8IYS4 520 aaPredicted RBP9.39□□□□□ -0.91
SCN8A-212ENST00000636945 C17orf53Q8N3J3 647 aaPredicted RBP9.39□□□□□ -0.91
SCN8A-212ENST00000636945 DDX41Q9UJV9 622 aaKnown RBP9.39□□□□□ -0.91
SCN8A-212ENST00000636945 MX1P20591 662 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 PDE4CQ08493 712 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 IFT57Q9NWB7 429 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 ABCC3O15438 1527 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 EVC2Q86UK5 1308 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 KIAA0232Q92628 1395 aa9.39□□□□□ -0.91
SCN8A-212ENST00000636945 EPB41L2O43491 1005 aaKnown RBP9.38□□□□□ -0.91
SCN8A-212ENST00000636945 TSPYL6Q8N831 410 aa9.38□□□□□ -0.91
SCN8A-212ENST00000636945 DNTTIP2Q5QJE6 756 aaKnown RBP9.38□□□□□ -0.91
SCN8A-212ENST00000636945 USP48Q86UV5 1035 aa9.38□□□□□ -0.91
SCN8A-212ENST00000636945 OTUD7AQ8TE49 926 aaPredicted RBP9.38□□□□□ -0.91
SCN8A-212ENST00000636945 API5Q9BZZ5 524 aaKnown RBP9.38□□□□□ -0.91
SCN8A-212ENST00000636945 PYCARDQ9ULZ3 195 aa9.38□□□□□ -0.91
SCN8A-212ENST00000636945 RPGRIP1LQ68CZ1 1315 aa9.38□□□□□ -0.91
SCN8A-212ENST00000636945 FAM193AP78312 1265 aa9.38□□□□□ -0.91
SCN8A-212ENST00000636945 RPAP2Q8IXW5 612 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms