RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 RBBP5Q15291 538 aaKnown RBP6.53□□□□□ -1.36
SCN2A-212ENST00000636662 GOPCQ9HD26 462 aa6.53□□□□□ -1.36
SCN2A-212ENST00000636662 CFAP58Q5T655 872 aa6.53□□□□□ -1.36
SCN2A-212ENST00000636662 LRSAM1Q6UWE0 723 aa6.53□□□□□ -1.36
SCN2A-212ENST00000636662 FMNL2Q96PY5 1086 aa6.53□□□□□ -1.36
SCN2A-212ENST00000636662 ZKSCAN1P17029 563 aaPredicted RBP6.53□□□□□ -1.36
SCN2A-212ENST00000636662 LRRFIP1Q32MZ4 808 aaKnown RBP6.53□□□□□ -1.36
SCN2A-212ENST00000636662 AP1ARQ63HQ0 302 aa6.53□□□□□ -1.36
SCN2A-212ENST00000636662 B4GALNT4Q76KP1 1039 aa6.53□□□□□ -1.36
SCN2A-212ENST00000636662 TXLNAP40222 546 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 ZNF853P0CG23 659 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 FBLN2P98095 1184 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 MAGEC2Q9UBF1 373 aaPredicted RBP6.52□□□□□ -1.37
SCN2A-212ENST00000636662 SMC3Q9UQE7 1217 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 ATP8B1O43520 1251 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 CEP112Q8N8E3 955 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 ARFGAP3Q9NP61 516 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 CHIC2Q9UKJ5 165 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 SOGA1O94964 1423 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 DNAJC21Q5F1R6 531 aaKnown RBP6.52□□□□□ -1.37
SCN2A-212ENST00000636662 RRAGDQ9NQL2 400 aaPredicted RBP6.52□□□□□ -1.37
SCN2A-212ENST00000636662 NOLC1Q14978 699 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCN2A-212ENST00000636662 MICALL1Q8N3F8 863 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 PPP1R9BQ96SB3 815 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 SMC6Q96SB8 1091 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 MPHOSPH9Q99550 1183 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 CWC25Q9NXE8 425 aaPredicted RBP6.52□□□□□ -1.37
SCN2A-212ENST00000636662 CTCFLQ8NI51 663 aaPredicted RBP6.52□□□□□ -1.37
SCN2A-212ENST00000636662 SCLT1Q96NL6 688 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.52□□□□□ -1.37
SCN2A-212ENST00000636662 BICDL2A1A5D9 508 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 VPS37CA5D8V6 355 aaPredicted RBP6.52□□□□□ -1.37
SCN2A-212ENST00000636662 NEBLO76041 1014 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 LMAN1P49257 510 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 SLC20A2Q08357 652 aa6.52□□□□□ -1.37
SCN2A-212ENST00000636662 PPFIA3O75145 1194 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 ATICP31939 592 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 KIF5BP33176 963 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 EIF5P55010 431 aaKnown RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 SETDB1Q15047 1291 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 DZIP1LQ8IYY4 767 aaKnown RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 SLMAPQ14BN4 828 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 CCDC150Q8NCX0 1101 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 RRP7BPQ9NSQ0 103 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 CTDP1Q9Y5B0 961 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 XPCQ01831 940 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 TPD52P55327 224 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 ANKRD1Q15327 319 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 DDX27Q96GQ7 796 aaKnown RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 KINO60870 393 aaKnown RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 HSPA4P34932 840 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 SUPT6HQ7KZ85 1726 aaKnown RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 IFFO1Q0D2I5 559 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 RTF1Q92541 710 aaKnown RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 TSPYL2Q9H2G4 693 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 GCOM1H8Y6P7 765 aaPredicted RBP6.51□□□□□ -1.37
SCN2A-212ENST00000636662 MYZAPP0CAP1 466 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 TBC1D32Q96NH3 1257 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 SDF4Q9BRK5 362 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 ELP1O95163 1332 aa6.51□□□□□ -1.37
SCN2A-212ENST00000636662 PSMA5P28066 241 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 CPLX2Q6PUV4 134 aaKnown RBP6.5□□□□□ -1.37
SCN2A-212ENST00000636662 CTAGE6Q86UF2 777 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 ARHGAP25P42331 645 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 ANAPC15P60006 121 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.5□□□□□ -1.37
SCN2A-212ENST00000636662 VPS41P49754 854 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 ZBTB17Q13105 803 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 RABGAP1Q9Y3P9 1069 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 EBAG9O00559 213 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 GMNNO75496 209 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 ZNF445P59923 1031 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 ERO1AQ96HE7 468 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 API5Q9BZZ5 524 aaKnown RBP6.5□□□□□ -1.37
SCN2A-212ENST00000636662 NKTRP30414 1462 aaKnown RBP6.5□□□□□ -1.37
SCN2A-212ENST00000636662 KRT85P78386 507 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 TMEM132AQ24JP5 1023 aa6.5□□□□□ -1.37
SCN2A-212ENST00000636662 ZNF396Q96N95 335 aaPredicted RBP6.5□□□□□ -1.37
SCN2A-212ENST00000636662 EFCAB5A4FU69 1503 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 CCDC172P0C7W6 258 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 SATB1Q01826 763 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 SPECC1LQ69YQ0 1117 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 CCDC148Q8NFR7 591 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 PIBF1Q8WXW3 757 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 MXRA7P84157 204 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 PDCD7Q8N8D1 485 aaKnown RBP6.49□□□□□ -1.37
SCN2A-212ENST00000636662 SPATS2LQ9NUQ6 558 aaKnown RBP6.49□□□□□ -1.37
SCN2A-212ENST00000636662 IKBKGQ9Y6K9 419 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 SOX12O15370 315 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 DHX16O60231 1041 aaKnown RBP6.49□□□□□ -1.37
SCN2A-212ENST00000636662 SLU7O95391 586 aaKnown RBP6.49□□□□□ -1.37
SCN2A-212ENST00000636662 SERPINC1P01008 464 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 MAP3K11Q16584 847 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 MORC1Q86VD1 984 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 ABCC8Q09428 1581 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 PEG3Q9GZU2 1588 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 ZKSCAN8Q15776 578 aaPredicted RBP6.49□□□□□ -1.37
SCN2A-212ENST00000636662 CEP57L1Q8IYX8 460 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 HIP1O00291 1037 aa6.49□□□□□ -1.37
SCN2A-212ENST00000636662 ZBTB41Q5SVQ8 909 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms