RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 PHACTR3Q96KR7 559 aa19.53■□□□□ 0.72
CLCN2-215ENST00000636661 RNF123Q5XPI4 1314 aa19.52■□□□□ 0.72
CLCN2-215ENST00000636661 PDRG1Q9NUG6 133 aa19.52■□□□□ 0.72
CLCN2-215ENST00000636661 TPM3P06753 285 aa19.52■□□□□ 0.71
CLCN2-215ENST00000636661 KDM5BQ9UGL1 1544 aa19.52■□□□□ 0.71
CLCN2-215ENST00000636661 KINO60870 393 aaKnown RBP19.51■□□□□ 0.71
CLCN2-215ENST00000636661 ERC1Q8IUD2 1116 aa19.51■□□□□ 0.71
CLCN2-215ENST00000636661 DDX11Q96FC9 970 aa19.51■□□□□ 0.71
CLCN2-215ENST00000636661 FLIIQ13045 1269 aa19.51■□□□□ 0.71
CLCN2-215ENST00000636661 PRPF40BQ6NWY9 871 aaKnown RBP19.51■□□□□ 0.71
CLCN2-215ENST00000636661 SPG7Q9UQ90 795 aa19.51■□□□□ 0.71
CLCN2-215ENST00000636661 XRCC6P12956 609 aaKnown RBP eCLIP19.5■□□□□ 0.71
CLCN2-215ENST00000636661 KRT85P78386 507 aa19.5■□□□□ 0.71
CLCN2-215ENST00000636661 BOLA2Q9H3K6 86 aa19.5■□□□□ 0.71
CLCN2-215ENST00000636661 RBM27Q9P2N5 1060 aaKnown RBP19.5■□□□□ 0.71
CLCN2-215ENST00000636661 MAGI3Q5TCQ9 1506 aa19.5■□□□□ 0.71
CLCN2-215ENST00000636661 BAG4O95429 457 aaKnown RBP19.5■□□□□ 0.71
CLCN2-215ENST00000636661 MPRIPQ6WCQ1 1025 aa19.5■□□□□ 0.71
CLCN2-215ENST00000636661 ZSCAN30Q86W11 494 aa19.49■□□□□ 0.71
CLCN2-215ENST00000636661 POLKQ9UBT6 870 aa19.49■□□□□ 0.71
CLCN2-215ENST00000636661 VPS37DQ86XT2 251 aa19.49■□□□□ 0.71
CLCN2-215ENST00000636661 STRN4Q9NRL3 753 aa19.49■□□□□ 0.71
CLCN2-215ENST00000636661 PLCH2O75038 1416 aa19.49■□□□□ 0.71
CLCN2-215ENST00000636661 ZNF771Q7L3S4 317 aaPredicted RBP19.49■□□□□ 0.71
CLCN2-215ENST00000636661 KIF1BPQ96EK5 621 aa19.49■□□□□ 0.71
CLCN2-215ENST00000636661 SDSP20132 328 aa19.48■□□□□ 0.71
CLCN2-215ENST00000636661 CCDC8Q9H0W5 538 aaPredicted RBP19.48■□□□□ 0.71
CLCN2-215ENST00000636661 CAMK4Q16566 473 aa19.48■□□□□ 0.71
CLCN2-215ENST00000636661 TNMDQ9H2S6 317 aa19.48■□□□□ 0.71
CLCN2-215ENST00000636661 NCKAP5LQ9HCH0 1330 aa19.48■□□□□ 0.71
CLCN2-215ENST00000636661 POLR3AO14802 1390 aaPredicted RBP19.48■□□□□ 0.71
CLCN2-215ENST00000636661 MARCH6O60337 910 aa19.48■□□□□ 0.71
CLCN2-215ENST00000636661 CCDC192P0DO97 292 aa19.48■□□□□ 0.71
CLCN2-215ENST00000636661 MTMR7Q9Y216 660 aa19.48■□□□□ 0.71
CLCN2-215ENST00000636661 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
CLCN2-215ENST00000636661 HIP1O00291 1037 aa19.47■□□□□ 0.71
CLCN2-215ENST00000636661 TATP17735 454 aaPredicted RBP19.47■□□□□ 0.71
CLCN2-215ENST00000636661 FKBP4Q02790 459 aaKnown RBP eCLIP19.47■□□□□ 0.71
CLCN2-215ENST00000636661 PDE4CQ08493 712 aa19.47■□□□□ 0.71
CLCN2-215ENST00000636661 ME1P48163 572 aa19.47■□□□□ 0.71
CLCN2-215ENST00000636661 A2MP01023 1474 aa19.47■□□□□ 0.71
CLCN2-215ENST00000636661 RRP12Q5JTH9 1297 aaKnown RBP19.46■□□□□ 0.71
CLCN2-215ENST00000636661 TTC22Q5TAA0 569 aa19.46■□□□□ 0.71
CLCN2-215ENST00000636661 AMOTL2Q9Y2J4 779 aa19.46■□□□□ 0.71
CLCN2-215ENST00000636661 ANKRD36BQ8N2N9 1353 aa19.46■□□□□ 0.71
CLCN2-215ENST00000636661 KIAA0556O60303 1618 aa19.46■□□□□ 0.71
CLCN2-215ENST00000636661 FOXO3O43524 673 aa19.46■□□□□ 0.71
CLCN2-215ENST00000636661 TPM2P07951 284 aa19.46■□□□□ 0.71
CLCN2-215ENST00000636661 LETM1O95202 739 aaPredicted RBP19.45■□□□□ 0.7
CLCN2-215ENST00000636661 STK38Q15208 465 aa19.45■□□□□ 0.7
CLCN2-215ENST00000636661 IL16Q14005 1332 aa19.45■□□□□ 0.7
CLCN2-215ENST00000636661 SMC2O95347 1197 aa19.45■□□□□ 0.7
CLCN2-215ENST00000636661 ZBTB40Q9NUA8 1239 aa19.45■□□□□ 0.7
CLCN2-215ENST00000636661 KDM2BQ8NHM5 1336 aa19.45■□□□□ 0.7
CLCN2-215ENST00000636661 RAD21O60216 631 aa19.45■□□□□ 0.7
CLCN2-215ENST00000636661 VAMP4O75379 141 aa19.45■□□□□ 0.7
CLCN2-215ENST00000636661 SPATA32Q96LK8 384 aa19.45■□□□□ 0.7
CLCN2-215ENST00000636661 NSD2O96028 1365 aa19.45■□□□□ 0.7
CLCN2-215ENST00000636661 COL17A1Q9UMD9 1497 aaPredicted RBP19.45■□□□□ 0.7
CLCN2-215ENST00000636661 ACEP12821 1306 aa19.45■□□□□ 0.7
CLCN2-215ENST00000636661 NUP160Q12769 1436 aa19.44■□□□□ 0.7
CLCN2-215ENST00000636661 PPFIA3O75145 1194 aa19.44■□□□□ 0.7
CLCN2-215ENST00000636661 GLRX3O76003 335 aaKnown RBP19.44■□□□□ 0.7
CLCN2-215ENST00000636661 SAFBQ15424 915 aaKnown RBP eCLIP19.44■□□□□ 0.7
CLCN2-215ENST00000636661 PDILTQ8N807 584 aa19.44■□□□□ 0.7
CLCN2-215ENST00000636661 UQCRHLA0A096LP55 91 aa19.44■□□□□ 0.7
CLCN2-215ENST00000636661 UQCRHP07919 91 aa19.44■□□□□ 0.7
CLCN2-215ENST00000636661 CABP4P57796 275 aa19.44■□□□□ 0.7
CLCN2-215ENST00000636661 ERICH2A1L162 156 aa19.43■□□□□ 0.7
CLCN2-215ENST00000636661 VPS53Q5VIR6 699 aa19.43■□□□□ 0.7
CLCN2-215ENST00000636661 FILIP1Q7Z7B0 1213 aa19.43■□□□□ 0.7
CLCN2-215ENST00000636661 MRPL50Q8N5N7 158 aaKnown RBP19.43■□□□□ 0.7
CLCN2-215ENST00000636661 DISP1Q96F81 1524 aa19.43■□□□□ 0.7
CLCN2-215ENST00000636661 PI4KAP2A4QPH2 592 aa19.43■□□□□ 0.7
CLCN2-215ENST00000636661 PTCD1O75127 700 aaKnown RBP19.43■□□□□ 0.7
CLCN2-215ENST00000636661 TNNT3P45378 269 aaPredicted RBP19.43■□□□□ 0.7
CLCN2-215ENST00000636661 TSR1Q2NL82 804 aaKnown RBP19.43■□□□□ 0.7
CLCN2-215ENST00000636661 PI4KAP1Q8N8J0 262 aa19.43■□□□□ 0.7
CLCN2-215ENST00000636661 UHRF1BP1Q6BDS2 1440 aa19.43■□□□□ 0.7
CLCN2-215ENST00000636661 PPP1R42Q7Z4L9 355 aa19.42■□□□□ 0.7
CLCN2-215ENST00000636661 USP25Q9UHP3 1055 aa19.42■□□□□ 0.7
CLCN2-215ENST00000636661 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
CLCN2-215ENST00000636661 RAB11FIP3O75154 756 aa19.42■□□□□ 0.7
CLCN2-215ENST00000636661 SMC5Q8IY18 1101 aa19.42■□□□□ 0.7
CLCN2-215ENST00000636661 DUOX2Q9NRD8 1548 aa19.42■□□□□ 0.7
CLCN2-215ENST00000636661 DNMT1P26358 1616 aaKnown RBP19.42■□□□□ 0.7
CLCN2-215ENST00000636661 TPM1P09493 284 aa19.42■□□□□ 0.7
CLCN2-215ENST00000636661 DNAAF4Q8WXU2 420 aa19.42■□□□□ 0.7
CLCN2-215ENST00000636661 JARID2Q92833 1246 aaPredicted RBP19.42■□□□□ 0.7
CLCN2-215ENST00000636661 ITSN2Q9NZM3 1697 aa19.41■□□□□ 0.7
CLCN2-215ENST00000636661 ARHGEF12Q9NZN5 1544 aa19.41■□□□□ 0.7
CLCN2-215ENST00000636661 NUP62CLQ9H1M0 184 aa19.41■□□□□ 0.7
CLCN2-215ENST00000636661 DHX16O60231 1041 aaKnown RBP19.41■□□□□ 0.7
CLCN2-215ENST00000636661 NAT10Q9H0A0 1025 aaKnown RBP19.41■□□□□ 0.7
CLCN2-215ENST00000636661 KDM6BO15054 1643 aa19.4■□□□□ 0.7
CLCN2-215ENST00000636661 G3V3G9 751 aa19.4■□□□□ 0.7
CLCN2-215ENST00000636661 DCAF8Q5TAQ9 597 aa19.4■□□□□ 0.7
CLCN2-215ENST00000636661 PCMTD1Q96MG8 357 aaPredicted RBP19.4■□□□□ 0.7
CLCN2-215ENST00000636661 TFIP11Q9UBB9 837 aaKnown RBP19.4■□□□□ 0.7
CLCN2-215ENST00000636661 NOC3LQ8WTT2 800 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms